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Sequence, Chains, Asymmetric and Biological Units

Title NMR STRUCTURE OF A SYNTHETIC SMALL MOLECULE, RBT203, BOUND TO HIV-1 TAR RNA
Keywords HIV-1, TAR RNA, DRUG DESIGN, LIGAND-RNA INTERACTION, RNA BULGE
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1UUD     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    B 29 929 0
2  Ligand   RNA (5'-(*GP*GP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP  *CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*UP*CP*UP*GP*CP*C) -3')  B 1 0 57
total       30 929 57

Nucleic acids
Unit 1 G17 G18 C19 A20 G21 A22 U23 C24 U25 G26 A27 G28 C29 C30 U31 G32 G33 G34 A35 G36 C37 U38 C39 U40 C41 U42 G43 C44 C45

Ligands
Unit 2 P141046

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany