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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA NUCLEOSIDE DIPHOSPHATE KINASE 1
Keywords NUCLEOTIDE DIPHOSPHATE, KINASE,, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1U8W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  A 149 1165 0
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  B 149 1165 0
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  C 149 1165 0
4  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  D 149 1165 0
5  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  E 149 1165 0
6  Protein   NUCLEOSIDE DIPHOSPHATE KINASE I  F 149 1165 0
7 Water     118 0 118
total       1012 6990 118

Proteins
Unit 1 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149
Unit 2 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149
Unit 3 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149
Unit 4 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149
Unit 5 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149
Unit 6 MET1 GLU2 GLN3 THR4 PHE5 ILE6 MET7 ILE8 LYS9 PRO10 ASP11 GLY12 VAL13 GLN14 ARG15 GLY16 LEU17 ILE18 GLY19 GLU20 VAL21 ILE22 CYS23 ARG24 PHE25 GLU26 LYS27 LYS28 GLY29 PHE30 THR31 LEU32 LYS33 GLY34 LEU35 LYS36 LEU37 ILE38 SER39 VAL40 GLU41 ARG42 SER43 PHE44 ALA45 GLU46 LYS47 HIS48 TYR49 GLU50 ASP51 LEU52 SER53 SER54 LYS55 SER56 PHE57 PHE58 SER59 GLY60 LEU61 VAL62 ASP63 TYR64 ILE65 VAL66 SER67 GLY68 PRO69 VAL70 VAL71 ALA72 MET73 ILE74 TRP75 GLU76 GLY77 LYS78 ASN79 VAL80 VAL81 LEU82 THR83 GLY84 ARG85 LYS86 ILE87 ILE88 GLY89 ALA90 THR91 ASN92 PRO93 ALA94 ALA95 SER96 GLU97 PRO98 GLY99 THR100 ILE101 ARG102 GLY103 ASP104 PHE105 ALA106 ILE107 ASP108 ILE109 GLY110 ARG111 ASN112 VAL113 ILE114 HIS115 GLY116 SER117 ASP118 SER119 VAL120 GLU121 SER122 ALA123 ARG124 LYS125 GLU126 ILE127 ALA128 LEU129 TRP130 PHE131 PRO132 ASP133 GLY134 PRO135 VAL136 ASN137 TRP138 GLN139 SER140 SER141 VAL142 HIS143 PRO144 TRP145 VAL146 TYR147 GLU148 THR149

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany