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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 4-HYDROXYBUTYRYL-COA DEHYDRATASE FROM C AMINOBUTYRICUM: RADICAL CATALYSIS INVOLVING A [4FE-4S] CLUS FLAVIN
Keywords ALFA-HELIXES, BETA-STRANDS, LYASE, ISOMERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1U8V     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 490 3811 0
2  Protein    B 490 3811 0
3  Protein    C 490 3811 0
4  Protein    D 490 3811 0
5  Ligand    A 2 0 61
6  Ligand    B 2 0 61
7  Ligand    C 2 0 61
8  Ligand    D 2 0 61
9 Water     2336 0 2336
total       4304 15244 2580
Proteins
Unit 1 MET1 LEU2 MET3 THR4 ALA5 GLU6 GLN7 TYR8 ILE9 GLU10 SER11 LEU12 ARG13 LYS14 LEU15 ASN16 THR17 ARG18 VAL19 TYR20 MET21 PHE22 GLY23 GLU24 LYS25 ILE26 GLU27 ASN28 TRP29 VAL30 ASP31 HIS32 PRO33 MET34 ILE35 ARG36 PRO37 SER38 ILE39 ASN40 CYS41 VAL42 ARG43 MET44 THR45 TYR46 GLU47 LEU48 ALA49 GLN50 ASP51 PRO52 GLN53 TYR54 ALA55 ASP56 LEU57 MET58 THR59 THR60 LYS61 SER62 ASN63 LEU64 ILE65 GLY66 LYS67 THR68 ILE69 ASN70 ARG71 PHE72 ALA73 ASN74 LEU75 HIS76 GLN77 SER78 THR79 ASP80 ASP81 LEU82 ARG83 LYS84 LYS85 VAL86 LYS87 MET88 GLN89 ARG90 LEU91 LEU92 GLY93 GLN94 LYS95 THR96 ALA97 SER98 CYS99 PHE100 GLN101 ARG102 CYS103 VAL104 GLY105 MET106 ASP107 ALA108 PHE109 ASN110 ALA111 VAL112 PHE113 SER114 THR115 THR116 TYR117 GLU118 ILE119 ASP120 GLN121 LYS122 TYR123 GLY124 THR125 ASN126 TYR127 HIS128 LYS129 ASN130 PHE131 THR132 GLU133 TYR134 LEU135 LYS136 TYR137 ILE138 GLN139 GLU140 ASN141 ASP142 LEU143 ILE144 VAL145 ASP146 GLY147 ALA148 MET149 THR150 ASP151 PRO152 LYS153 GLY154 ASP155 ARG156 GLY157 LEU158 ALA159 PRO160 SER161 ALA162 GLN163 LYS164 ASP165 PRO166 ASP167 LEU168 PHE169 LEU170 ARG171 ILE172 VAL173 GLU174 LYS175 ARG176 GLU177 ASP178 GLY179 ILE180 VAL181 VAL182 ARG183 GLY184 ALA185 LYS186 ALA187 HIS188 GLN189 THR190 GLY191 SER192 ILE193 ASN194 SER195 HIS196 GLU197 HIS198 ILE199 ILE200 MET201 PRO202 THR203 ILE204 ALA205 MET206 THR207 GLU208 ALA209 ASP210 LYS211 ASP212 TYR213 ALA214 VAL215 SER216 PHE217 ALA218 CYS219 PRO220 SER221 ASP222 ALA223 ASP224 GLY225 LEU226 PHE227 MET228 ILE229 TYR230 GLY231 ARG232 GLN233 SER234 CYS235 ASP236 THR237 ARG238 LYS239 MET240 GLU241 GLU242 GLY243 ALA244 ASP245 ILE246 ASP247 LEU248 GLY249 ASN250 LYS251 GLN252 PHE253 GLY254 GLY255 GLN256 GLU257 ALA258 LEU259 VAL260 VAL261 PHE262 ASP263 ASN264 VAL265 PHE266 ILE267 PRO268 ASN269 ASP270 ARG271 ILE272 PHE273 LEU274 CYS275 GLN276 GLU277 TYR278 ASP279 PHE280 ALA281 GLY282 MET283 MET284 VAL285 GLU286 ARG287 PHE288 ALA289 GLY290 TYR291 HIS292 ARG293 GLN294 SER295 TYR296 GLY297 GLY298 CYS299 LYS300 VAL301 GLY302 VAL303 GLY304 ASP305 VAL306 VAL307 ILE308 GLY309 ALA310 ALA311 ALA312 LEU313 ALA314 ALA315 ASP316 TYR317 ASN318 GLY319 ALA320 GLN321 LYS322 ALA323 SER324 HIS325 VAL326 LYS327 ASP328 LYS329 LEU330 ILE331 GLU332 MET333 THR334 HIS335 LEU336 ASN337 GLU338 THR339 LEU340 TYR341 CYS342 CYS343 GLY344 ILE345 ALA346 CYS347 SER348 ALA349 GLU350 GLY351 TYR352 PRO353 THR354 ALA355 ALA356 GLY357 ASN358 TYR359 GLN360 ILE361 ASP362 LEU363 LEU364 LEU365 ALA366 ASN367 VAL368 CYS369 LYS370 GLN371 ASN372 ILE373 THR374 ARG375 PHE376 PRO377 TYR378 GLU379 ILE380 VAL381 ARG382 LEU383 ALA384 GLU385 ASP386 ILE387 ALA388 GLY389 GLY390 LEU391 MET392 VAL393 THR394 MET395 PRO396 SER397 GLU398 ALA399 ASP400 PHE401 LYS402 SER403 GLU404 THR405 VAL406 VAL407 GLY408 ARG409 ASP410 GLY411 GLU412 THR413 ILE414 GLY415 ASP416 PHE417 CYS418 ASN419 LYS420 PHE421 PHE422 ALA423 ALA424 ALA425 PRO426 THR427 CYS428 THR429 THR430 GLU431 GLU432 ARG433 MET434 ARG435 VAL436 LEU437 ARG438 PHE439 LEU440 GLU441 ASN442 ILE443 CYS444 LEU445 GLY446 ALA447 SER448 ALA449 VAL450 GLY451 TYR452 ARG453 THR454 GLU455 SER456 MET457 HIS458 GLY459 ALA460 GLY461 SER462 PRO463 GLN464 ALA465 GLN466 ARG467 ILE468 MET469 ILE470 ALA471 ARG472 GLN473 GLY474 ASN475 ILE476 ASN477 ALA478 LYS479 LYS480 GLU481 LEU482 ALA483 LYS484 ALA485 ILE486 ALA487 GLY488 ILE489 LYS490
Unit 2 MET1 LEU2 MET3 THR4 ALA5 GLU6 GLN7 TYR8 ILE9 GLU10 SER11 LEU12 ARG13 LYS14 LEU15 ASN16 THR17 ARG18 VAL19 TYR20 MET21 PHE22 GLY23 GLU24 LYS25 ILE26 GLU27 ASN28 TRP29 VAL30 ASP31 HIS32 PRO33 MET34 ILE35 ARG36 PRO37 SER38 ILE39 ASN40 CYS41 VAL42 ARG43 MET44 THR45 TYR46 GLU47 LEU48 ALA49 GLN50 ASP51 PRO52 GLN53 TYR54 ALA55 ASP56 LEU57 MET58 THR59 THR60 LYS61 SER62 ASN63 LEU64 ILE65 GLY66 LYS67 THR68 ILE69 ASN70 ARG71 PHE72 ALA73 ASN74 LEU75 HIS76 GLN77 SER78 THR79 ASP80 ASP81 LEU82 ARG83 LYS84 LYS85 VAL86 LYS87 MET88 GLN89 ARG90 LEU91 LEU92 GLY93 GLN94 LYS95 THR96 ALA97 SER98 CYS99 PHE100 GLN101 ARG102 CYS103 VAL104 GLY105 MET106 ASP107 ALA108 PHE109 ASN110 ALA111 VAL112 PHE113 SER114 THR115 THR116 TYR117 GLU118 ILE119 ASP120 GLN121 LYS122 TYR123 GLY124 THR125 ASN126 TYR127 HIS128 LYS129 ASN130 PHE131 THR132 GLU133 TYR134 LEU135 LYS136 TYR137 ILE138 GLN139 GLU140 ASN141 ASP142 LEU143 ILE144 VAL145 ASP146 GLY147 ALA148 MET149 THR150 ASP151 PRO152 LYS153 GLY154 ASP155 ARG156 GLY157 LEU158 ALA159 PRO160 SER161 ALA162 GLN163 LYS164 ASP165 PRO166 ASP167 LEU168 PHE169 LEU170 ARG171 ILE172 VAL173 GLU174 LYS175 ARG176 GLU177 ASP178 GLY179 ILE180 VAL181 VAL182 ARG183 GLY184 ALA185 LYS186 ALA187 HIS188 GLN189 THR190 GLY191 SER192 ILE193 ASN194 SER195 HIS196 GLU197 HIS198 ILE199 ILE200 MET201 PRO202 THR203 ILE204 ALA205 MET206 THR207 GLU208 ALA209 ASP210 LYS211 ASP212 TYR213 ALA214 VAL215 SER216 PHE217 ALA218 CYS219 PRO220 SER221 ASP222 ALA223 ASP224 GLY225 LEU226 PHE227 MET228 ILE229 TYR230 GLY231 ARG232 GLN233 SER234 CYS235 ASP236 THR237 ARG238 LYS239 MET240 GLU241 GLU242 GLY243 ALA244 ASP245 ILE246 ASP247 LEU248 GLY249 ASN250 LYS251 GLN252 PHE253 GLY254 GLY255 GLN256 GLU257 ALA258 LEU259 VAL260 VAL261 PHE262 ASP263 ASN264 VAL265 PHE266 ILE267 PRO268 ASN269 ASP270 ARG271 ILE272 PHE273 LEU274 CYS275 GLN276 GLU277 TYR278 ASP279 PHE280 ALA281 GLY282 MET283 MET284 VAL285 GLU286 ARG287 PHE288 ALA289 GLY290 TYR291 HIS292 ARG293 GLN294 SER295 TYR296 GLY297 GLY298 CYS299 LYS300 VAL301 GLY302 VAL303 GLY304 ASP305 VAL306 VAL307 ILE308 GLY309 ALA310 ALA311 ALA312 LEU313 ALA314 ALA315 ASP316 TYR317 ASN318 GLY319 ALA320 GLN321 LYS322 ALA323 SER324 HIS325 VAL326 LYS327 ASP328 LYS329 LEU330 ILE331 GLU332 MET333 THR334 HIS335 LEU336 ASN337 GLU338 THR339 LEU340 TYR341 CYS342 CYS343 GLY344 ILE345 ALA346 CYS347 SER348 ALA349 GLU350 GLY351 TYR352 PRO353 THR354 ALA355 ALA356 GLY357 ASN358 TYR359 GLN360 ILE361 ASP362 LEU363 LEU364 LEU365 ALA366 ASN367 VAL368 CYS369 LYS370 GLN371 ASN372 ILE373 THR374 ARG375 PHE376 PRO377 TYR378 GLU379 ILE380 VAL381 ARG382 LEU383 ALA384 GLU385 ASP386 ILE387 ALA388 GLY389 GLY390 LEU391 MET392 VAL393 THR394 MET395 PRO396 SER397 GLU398 ALA399 ASP400 PHE401 LYS402 SER403 GLU404 THR405 VAL406 VAL407 GLY408 ARG409 ASP410 GLY411 GLU412 THR413 ILE414 GLY415 ASP416 PHE417 CYS418 ASN419 LYS420 PHE421 PHE422 ALA423 ALA424 ALA425 PRO426 THR427 CYS428 THR429 THR430 GLU431 GLU432 ARG433 MET434 ARG435 VAL436 LEU437 ARG438 PHE439 LEU440 GLU441 ASN442 ILE443 CYS444 LEU445 GLY446 ALA447 SER448 ALA449 VAL450 GLY451 TYR452 ARG453 THR454 GLU455 SER456 MET457 HIS458 GLY459 ALA460 GLY461 SER462 PRO463 GLN464 ALA465 GLN466 ARG467 ILE468 MET469 ILE470 ALA471 ARG472 GLN473 GLY474 ASN475 ILE476 ASN477 ALA478 LYS479 LYS480 GLU481 LEU482 ALA483 LYS484 ALA485 ILE486 ALA487 GLY488 ILE489 LYS490
Unit 3 MET1 LEU2 MET3 THR4 ALA5 GLU6 GLN7 TYR8 ILE9 GLU10 SER11 LEU12 ARG13 LYS14 LEU15 ASN16 THR17 ARG18 VAL19 TYR20 MET21 PHE22 GLY23 GLU24 LYS25 ILE26 GLU27 ASN28 TRP29 VAL30 ASP31 HIS32 PRO33 MET34 ILE35 ARG36 PRO37 SER38 ILE39 ASN40 CYS41 VAL42 ARG43 MET44 THR45 TYR46 GLU47 LEU48 ALA49 GLN50 ASP51 PRO52 GLN53 TYR54 ALA55 ASP56 LEU57 MET58 THR59 THR60 LYS61 SER62 ASN63 LEU64 ILE65 GLY66 LYS67 THR68 ILE69 ASN70 ARG71 PHE72 ALA73 ASN74 LEU75 HIS76 GLN77 SER78 THR79 ASP80 ASP81 LEU82 ARG83 LYS84 LYS85 VAL86 LYS87 MET88 GLN89 ARG90 LEU91 LEU92 GLY93 GLN94 LYS95 THR96 ALA97 SER98 CYS99 PHE100 GLN101 ARG102 CYS103 VAL104 GLY105 MET106 ASP107 ALA108 PHE109 ASN110 ALA111 VAL112 PHE113 SER114 THR115 THR116 TYR117 GLU118 ILE119 ASP120 GLN121 LYS122 TYR123 GLY124 THR125 ASN126 TYR127 HIS128 LYS129 ASN130 PHE131 THR132 GLU133 TYR134 LEU135 LYS136 TYR137 ILE138 GLN139 GLU140 ASN141 ASP142 LEU143 ILE144 VAL145 ASP146 GLY147 ALA148 MET149 THR150 ASP151 PRO152 LYS153 GLY154 ASP155 ARG156 GLY157 LEU158 ALA159 PRO160 SER161 ALA162 GLN163 LYS164 ASP165 PRO166 ASP167 LEU168 PHE169 LEU170 ARG171 ILE172 VAL173 GLU174 LYS175 ARG176 GLU177 ASP178 GLY179 ILE180 VAL181 VAL182 ARG183 GLY184 ALA185 LYS186 ALA187 HIS188 GLN189 THR190 GLY191 SER192 ILE193 ASN194 SER195 HIS196 GLU197 HIS198 ILE199 ILE200 MET201 PRO202 THR203 ILE204 ALA205 MET206 THR207 GLU208 ALA209 ASP210 LYS211 ASP212 TYR213 ALA214 VAL215 SER216 PHE217 ALA218 CYS219 PRO220 SER221 ASP222 ALA223 ASP224 GLY225 LEU226 PHE227 MET228 ILE229 TYR230 GLY231 ARG232 GLN233 SER234 CYS235 ASP236 THR237 ARG238 LYS239 MET240 GLU241 GLU242 GLY243 ALA244 ASP245 ILE246 ASP247 LEU248 GLY249 ASN250 LYS251 GLN252 PHE253 GLY254 GLY255 GLN256 GLU257 ALA258 LEU259 VAL260 VAL261 PHE262 ASP263 ASN264 VAL265 PHE266 ILE267 PRO268 ASN269 ASP270 ARG271 ILE272 PHE273 LEU274 CYS275 GLN276 GLU277 TYR278 ASP279 PHE280 ALA281 GLY282 MET283 MET284 VAL285 GLU286 ARG287 PHE288 ALA289 GLY290 TYR291 HIS292 ARG293 GLN294 SER295 TYR296 GLY297 GLY298 CYS299 LYS300 VAL301 GLY302 VAL303 GLY304 ASP305 VAL306 VAL307 ILE308 GLY309 ALA310 ALA311 ALA312 LEU313 ALA314 ALA315 ASP316 TYR317 ASN318 GLY319 ALA320 GLN321 LYS322 ALA323 SER324 HIS325 VAL326 LYS327 ASP328 LYS329 LEU330 ILE331 GLU332 MET333 THR334 HIS335 LEU336 ASN337 GLU338 THR339 LEU340 TYR341 CYS342 CYS343 GLY344 ILE345 ALA346 CYS347 SER348 ALA349 GLU350 GLY351 TYR352 PRO353 THR354 ALA355 ALA356 GLY357 ASN358 TYR359 GLN360 ILE361 ASP362 LEU363 LEU364 LEU365 ALA366 ASN367 VAL368 CYS369 LYS370 GLN371 ASN372 ILE373 THR374 ARG375 PHE376 PRO377 TYR378 GLU379 ILE380 VAL381 ARG382 LEU383 ALA384 GLU385 ASP386 ILE387 ALA388 GLY389 GLY390 LEU391 MET392 VAL393 THR394 MET395 PRO396 SER397 GLU398 ALA399 ASP400 PHE401 LYS402 SER403 GLU404 THR405 VAL406 VAL407 GLY408 ARG409 ASP410 GLY411 GLU412 THR413 ILE414 GLY415 ASP416 PHE417 CYS418 ASN419 LYS420 PHE421 PHE422 ALA423 ALA424 ALA425 PRO426 THR427 CYS428 THR429 THR430 GLU431 GLU432 ARG433 MET434 ARG435 VAL436 LEU437 ARG438 PHE439 LEU440 GLU441 ASN442 ILE443 CYS444 LEU445 GLY446 ALA447 SER448 ALA449 VAL450 GLY451 TYR452 ARG453 THR454 GLU455 SER456 MET457 HIS458 GLY459 ALA460 GLY461 SER462 PRO463 GLN464 ALA465 GLN466 ARG467 ILE468 MET469 ILE470 ALA471 ARG472 GLN473 GLY474 ASN475 ILE476 ASN477 ALA478 LYS479 LYS480 GLU481 LEU482 ALA483 LYS484 ALA485 ILE486 ALA487 GLY488 ILE489 LYS490
Unit 4 MET1 LEU2 MET3 THR4 ALA5 GLU6 GLN7 TYR8 ILE9 GLU10 SER11 LEU12 ARG13 LYS14 LEU15 ASN16 THR17 ARG18 VAL19 TYR20 MET21 PHE22 GLY23 GLU24 LYS25 ILE26 GLU27 ASN28 TRP29 VAL30 ASP31 HIS32 PRO33 MET34 ILE35 ARG36 PRO37 SER38 ILE39 ASN40 CYS41 VAL42 ARG43 MET44 THR45 TYR46 GLU47 LEU48 ALA49 GLN50 ASP51 PRO52 GLN53 TYR54 ALA55 ASP56 LEU57 MET58 THR59 THR60 LYS61 SER62 ASN63 LEU64 ILE65 GLY66 LYS67 THR68 ILE69 ASN70 ARG71 PHE72 ALA73 ASN74 LEU75 HIS76 GLN77 SER78 THR79 ASP80 ASP81 LEU82 ARG83 LYS84 LYS85 VAL86 LYS87 MET88 GLN89 ARG90 LEU91 LEU92 GLY93 GLN94 LYS95 THR96 ALA97 SER98 CYS99 PHE100 GLN101 ARG102 CYS103 VAL104 GLY105 MET106 ASP107 ALA108 PHE109 ASN110 ALA111 VAL112 PHE113 SER114 THR115 THR116 TYR117 GLU118 ILE119 ASP120 GLN121 LYS122 TYR123 GLY124 THR125 ASN126 TYR127 HIS128 LYS129 ASN130 PHE131 THR132 GLU133 TYR134 LEU135 LYS136 TYR137 ILE138 GLN139 GLU140 ASN141 ASP142 LEU143 ILE144 VAL145 ASP146 GLY147 ALA148 MET149 THR150 ASP151 PRO152 LYS153 GLY154 ASP155 ARG156 GLY157 LEU158 ALA159 PRO160 SER161 ALA162 GLN163 LYS164 ASP165 PRO166 ASP167 LEU168 PHE169 LEU170 ARG171 ILE172 VAL173 GLU174 LYS175 ARG176 GLU177 ASP178 GLY179 ILE180 VAL181 VAL182 ARG183 GLY184 ALA185 LYS186 ALA187 HIS188 GLN189 THR190 GLY191 SER192 ILE193 ASN194 SER195 HIS196 GLU197 HIS198 ILE199 ILE200 MET201 PRO202 THR203 ILE204 ALA205 MET206 THR207 GLU208 ALA209 ASP210 LYS211 ASP212 TYR213 ALA214 VAL215 SER216 PHE217 ALA218 CYS219 PRO220 SER221 ASP222 ALA223 ASP224 GLY225 LEU226 PHE227 MET228 ILE229 TYR230 GLY231 ARG232 GLN233 SER234 CYS235 ASP236 THR237 ARG238 LYS239 MET240 GLU241 GLU242 GLY243 ALA244 ASP245 ILE246 ASP247 LEU248 GLY249 ASN250 LYS251 GLN252 PHE253 GLY254 GLY255 GLN256 GLU257 ALA258 LEU259 VAL260 VAL261 PHE262 ASP263 ASN264 VAL265 PHE266 ILE267 PRO268 ASN269 ASP270 ARG271 ILE272 PHE273 LEU274 CYS275 GLN276 GLU277 TYR278 ASP279 PHE280 ALA281 GLY282 MET283 MET284 VAL285 GLU286 ARG287 PHE288 ALA289 GLY290 TYR291 HIS292 ARG293 GLN294 SER295 TYR296 GLY297 GLY298 CYS299 LYS300 VAL301 GLY302 VAL303 GLY304 ASP305 VAL306 VAL307 ILE308 GLY309 ALA310 ALA311 ALA312 LEU313 ALA314 ALA315 ASP316 TYR317 ASN318 GLY319 ALA320 GLN321 LYS322 ALA323 SER324 HIS325 VAL326 LYS327 ASP328 LYS329 LEU330 ILE331 GLU332 MET333 THR334 HIS335 LEU336 ASN337 GLU338 THR339 LEU340 TYR341 CYS342 CYS343 GLY344 ILE345 ALA346 CYS347 SER348 ALA349 GLU350 GLY351 TYR352 PRO353 THR354 ALA355 ALA356 GLY357 ASN358 TYR359 GLN360 ILE361 ASP362 LEU363 LEU364 LEU365 ALA366 ASN367 VAL368 CYS369 LYS370 GLN371 ASN372 ILE373 THR374 ARG375 PHE376 PRO377 TYR378 GLU379 ILE380 VAL381 ARG382 LEU383 ALA384 GLU385 ASP386 ILE387 ALA388 GLY389 GLY390 LEU391 MET392 VAL393 THR394 MET395 PRO396 SER397 GLU398 ALA399 ASP400 PHE401 LYS402 SER403 GLU404 THR405 VAL406 VAL407 GLY408 ARG409 ASP410 GLY411 GLU412 THR413 ILE414 GLY415 ASP416 PHE417 CYS418 ASN419 LYS420 PHE421 PHE422 ALA423 ALA424 ALA425 PRO426 THR427 CYS428 THR429 THR430 GLU431 GLU432 ARG433 MET434 ARG435 VAL436 LEU437 ARG438 PHE439 LEU440 GLU441 ASN442 ILE443 CYS444 LEU445 GLY446 ALA447 SER448 ALA449 VAL450 GLY451 TYR452 ARG453 THR454 GLU455 SER456 MET457 HIS458 GLY459 ALA460 GLY461 SER462 PRO463 GLN464 ALA465 GLN466 ARG467 ILE468 MET469 ILE470 ALA471 ARG472 GLN473 GLY474 ASN475 ILE476 ASN477 ALA478 LYS479 LYS480 GLU481 LEU482 ALA483 LYS484 ALA485 ILE486 ALA487 GLY488 ILE489 LYS490
Ligands
Unit 5 SF4491 FAD492
Unit 6 SF4491 FAD492
Unit 7 SF4491 FAD492
Unit 8 SF4491 FAD492
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany