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Sequence, Chains, Asymmetric and Biological Units

Title MCSG APC5046 PROBABLE GLUTAMINASE YBAS
Keywords STRUCTURAL GENOMICS, APC5046, PSI, PROTEIN STRUCTURE INITIAT MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1U60     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROBABLE GLUTAMINASE YBAS  A 309 2304 0
2  Protein   PROBABLE GLUTAMINASE YBAS  B 309 2304 0
3  Protein   PROBABLE GLUTAMINASE YBAS  C 309 2304 0
4  Protein   PROBABLE GLUTAMINASE YBAS  D 309 2304 0
5  Ligand   PROBABLE GLUTAMINASE YBAS  A 8 0 30
6  Ligand   PROBABLE GLUTAMINASE YBAS  B 6 0 20
7  Ligand   PROBABLE GLUTAMINASE YBAS  C 3 0 10
8  Ligand   PROBABLE GLUTAMINASE YBAS  D 4 0 15
9 Water     1150 0 1150
total       2407 9216 1225

Proteins
Unit 1 LEU2 ASP3 ALA4 ASN5 LYS6 LEU7 GLN8 GLN9 ALA10 VAL11 ASP12 GLN13 ALA14 TYR15 THR16 GLN17 PHE18 HIS19 SER20 LEU21 ASN22 GLY23 GLY24 GLN25 ASN26 ALA27 ASP28 TYR29 ILE30 PRO31 PHE32 LEU33 ALA34 ASN35 VAL36 PRO37 GLY38 GLN39 LEU40 ALA41 ALA42 VAL43 ALA44 ILE45 VAL46 THR47 CYS48 ASP49 GLY50 ASN51 VAL52 TYR53 SER54 ALA55 GLY56 ASP57 SER58 ASP59 TYR60 ARG61 PHE62 ALA63 LEU64 GLU65 SER66 ILE67 SER68 LYS69 VAL70 CYS71 THR72 LEU73 ALA74 LEU75 ALA76 LEU77 GLU78 ASP79 VAL80 GLY81 PRO82 GLN83 ALA84 VAL85 GLN86 ASP87 LYS88 ILE89 GLY90 ALA91 ASP92 PRO93 THR94 GLY95 LEU96 PRO97 PHE98 ASN99 SER100 VAL101 ILE102 ALA103 LEU104 GLU105 LEU106 HIS107 GLY108 GLY109 LYS110 PRO111 LEU112 SER113 PRO114 LEU115 VAL116 ASN117 ALA118 GLY119 ALA120 ILE121 ALA122 THR123 THR124 SER125 LEU126 ILE127 ASN128 ALA129 GLU130 ASN131 VAL132 GLU133 GLN134 ARG135 TRP136 GLN137 ARG138 ILE139 LEU140 HIS141 ILE142 GLN143 GLN144 GLN145 LEU146 ALA147 GLY148 GLU149 GLN150 VAL151 ALA152 LEU153 SER154 ASP155 GLU156 VAL157 ASN158 GLN159 SER160 GLU161 GLN162 THR163 THR164 ASN165 PHE166 HIS167 ASN168 ARG169 ALA170 ILE171 ALA172 TRP173 LEU174 LEU175 TYR176 SER177 ALA178 GLY179 TYR180 LEU181 TYR182 CYS183 ASP184 ALA185 MET186 GLU187 ALA188 CYS189 ASP190 VAL191 TYR192 THR193 ARG194 GLN195 CYS196 SER197 THR198 LEU199 LEU200 ASN201 THR202 ILE203 GLU204 LEU205 ALA206 THR207 LEU208 GLY209 ALA210 THR211 LEU212 ALA213 ALA214 GLY215 GLY216 VAL217 ASN218 PRO219 LEU220 THR221 HIS222 LYS223 ARG224 VAL225 LEU226 GLN227 ALA228 ASP229 ASN230 VAL231 PRO232 TYR233 ILE234 LEU235 ALA236 GLU237 MET238 MET239 MET240 GLU241 GLY242 LEU243 TYR244 GLY245 ARG246 SER247 GLY248 ASP249 TRP250 ALA251 TYR252 ARG253 VAL254 GLY255 LEU256 PRO257 GLY258 LYS259 SER260 GLY261 VAL262 GLY263 GLY264 GLY265 ILE266 LEU267 ALA268 VAL269 VAL270 PRO271 GLY272 VAL273 MET274 GLY275 ILE276 ALA277 ALA278 PHE279 SER280 PRO281 PRO282 LEU283 ASP284 GLU285 ASP286 GLY287 ASN288 SER289 VAL290 ARG291 GLY292 GLN293 LYS294 MET295 VAL296 ALA297 SER298 VAL299 ALA300 LYS301 GLN302 LEU303 GLY304 TYR305 ASN306 VAL307 PHE308 LYS309 GLY310
Unit 2 LEU2 ASP3 ALA4 ASN5 LYS6 LEU7 GLN8 GLN9 ALA10 VAL11 ASP12 GLN13 ALA14 TYR15 THR16 GLN17 PHE18 HIS19 SER20 LEU21 ASN22 GLY23 GLY24 GLN25 ASN26 ALA27 ASP28 TYR29 ILE30 PRO31 PHE32 LEU33 ALA34 ASN35 VAL36 PRO37 GLY38 GLN39 LEU40 ALA41 ALA42 VAL43 ALA44 ILE45 VAL46 THR47 CYS48 ASP49 GLY50 ASN51 VAL52 TYR53 SER54 ALA55 GLY56 ASP57 SER58 ASP59 TYR60 ARG61 PHE62 ALA63 LEU64 GLU65 SER66 ILE67 SER68 LYS69 VAL70 CYS71 THR72 LEU73 ALA74 LEU75 ALA76 LEU77 GLU78 ASP79 VAL80 GLY81 PRO82 GLN83 ALA84 VAL85 GLN86 ASP87 LYS88 ILE89 GLY90 ALA91 ASP92 PRO93 THR94 GLY95 LEU96 PRO97 PHE98 ASN99 SER100 VAL101 ILE102 ALA103 LEU104 GLU105 LEU106 HIS107 GLY108 GLY109 LYS110 PRO111 LEU112 SER113 PRO114 LEU115 VAL116 ASN117 ALA118 GLY119 ALA120 ILE121 ALA122 THR123 THR124 SER125 LEU126 ILE127 ASN128 ALA129 GLU130 ASN131 VAL132 GLU133 GLN134 ARG135 TRP136 GLN137 ARG138 ILE139 LEU140 HIS141 ILE142 GLN143 GLN144 GLN145 LEU146 ALA147 GLY148 GLU149 GLN150 VAL151 ALA152 LEU153 SER154 ASP155 GLU156 VAL157 ASN158 GLN159 SER160 GLU161 GLN162 THR163 THR164 ASN165 PHE166 HIS167 ASN168 ARG169 ALA170 ILE171 ALA172 TRP173 LEU174 LEU175 TYR176 SER177 ALA178 GLY179 TYR180 LEU181 TYR182 CYS183 ASP184 ALA185 MET186 GLU187 ALA188 CYS189 ASP190 VAL191 TYR192 THR193 ARG194 GLN195 CYS196 SER197 THR198 LEU199 LEU200 ASN201 THR202 ILE203 GLU204 LEU205 ALA206 THR207 LEU208 GLY209 ALA210 THR211 LEU212 ALA213 ALA214 GLY215 GLY216 VAL217 ASN218 PRO219 LEU220 THR221 HIS222 LYS223 ARG224 VAL225 LEU226 GLN227 ALA228 ASP229 ASN230 VAL231 PRO232 TYR233 ILE234 LEU235 ALA236 GLU237 MET238 MET239 MET240 GLU241 GLY242 LEU243 TYR244 GLY245 ARG246 SER247 GLY248 ASP249 TRP250 ALA251 TYR252 ARG253 VAL254 GLY255 LEU256 PRO257 GLY258 LYS259 SER260 GLY261 VAL262 GLY263 GLY264 GLY265 ILE266 LEU267 ALA268 VAL269 VAL270 PRO271 GLY272 VAL273 MET274 GLY275 ILE276 ALA277 ALA278 PHE279 SER280 PRO281 PRO282 LEU283 ASP284 GLU285 ASP286 GLY287 ASN288 SER289 VAL290 ARG291 GLY292 GLN293 LYS294 MET295 VAL296 ALA297 SER298 VAL299 ALA300 LYS301 GLN302 LEU303 GLY304 TYR305 ASN306 VAL307 PHE308 LYS309 GLY310
Unit 3 LEU2 ASP3 ALA4 ASN5 LYS6 LEU7 GLN8 GLN9 ALA10 VAL11 ASP12 GLN13 ALA14 TYR15 THR16 GLN17 PHE18 HIS19 SER20 LEU21 ASN22 GLY23 GLY24 GLN25 ASN26 ALA27 ASP28 TYR29 ILE30 PRO31 PHE32 LEU33 ALA34 ASN35 VAL36 PRO37 GLY38 GLN39 LEU40 ALA41 ALA42 VAL43 ALA44 ILE45 VAL46 THR47 CYS48 ASP49 GLY50 ASN51 VAL52 TYR53 SER54 ALA55 GLY56 ASP57 SER58 ASP59 TYR60 ARG61 PHE62 ALA63 LEU64 GLU65 SER66 ILE67 SER68 LYS69 VAL70 CYS71 THR72 LEU73 ALA74 LEU75 ALA76 LEU77 GLU78 ASP79 VAL80 GLY81 PRO82 GLN83 ALA84 VAL85 GLN86 ASP87 LYS88 ILE89 GLY90 ALA91 ASP92 PRO93 THR94 GLY95 LEU96 PRO97 PHE98 ASN99 SER100 VAL101 ILE102 ALA103 LEU104 GLU105 LEU106 HIS107 GLY108 GLY109 LYS110 PRO111 LEU112 SER113 PRO114 LEU115 VAL116 ASN117 ALA118 GLY119 ALA120 ILE121 ALA122 THR123 THR124 SER125 LEU126 ILE127 ASN128 ALA129 GLU130 ASN131 VAL132 GLU133 GLN134 ARG135 TRP136 GLN137 ARG138 ILE139 LEU140 HIS141 ILE142 GLN143 GLN144 GLN145 LEU146 ALA147 GLY148 GLU149 GLN150 VAL151 ALA152 LEU153 SER154 ASP155 GLU156 VAL157 ASN158 GLN159 SER160 GLU161 GLN162 THR163 THR164 ASN165 PHE166 HIS167 ASN168 ARG169 ALA170 ILE171 ALA172 TRP173 LEU174 LEU175 TYR176 SER177 ALA178 GLY179 TYR180 LEU181 TYR182 CYS183 ASP184 ALA185 MET186 GLU187 ALA188 CYS189 ASP190 VAL191 TYR192 THR193 ARG194 GLN195 CYS196 SER197 THR198 LEU199 LEU200 ASN201 THR202 ILE203 GLU204 LEU205 ALA206 THR207 LEU208 GLY209 ALA210 THR211 LEU212 ALA213 ALA214 GLY215 GLY216 VAL217 ASN218 PRO219 LEU220 THR221 HIS222 LYS223 ARG224 VAL225 LEU226 GLN227 ALA228 ASP229 ASN230 VAL231 PRO232 TYR233 ILE234 LEU235 ALA236 GLU237 MET238 MET239 MET240 GLU241 GLY242 LEU243 TYR244 GLY245 ARG246 SER247 GLY248 ASP249 TRP250 ALA251 TYR252 ARG253 VAL254 GLY255 LEU256 PRO257 GLY258 LYS259 SER260 GLY261 VAL262 GLY263 GLY264 GLY265 ILE266 LEU267 ALA268 VAL269 VAL270 PRO271 GLY272 VAL273 MET274 GLY275 ILE276 ALA277 ALA278 PHE279 SER280 PRO281 PRO282 LEU283 ASP284 GLU285 ASP286 GLY287 ASN288 SER289 VAL290 ARG291 GLY292 GLN293 LYS294 MET295 VAL296 ALA297 SER298 VAL299 ALA300 LYS301 GLN302 LEU303 GLY304 TYR305 ASN306 VAL307 PHE308 LYS309 GLY310
Unit 4 LEU2 ASP3 ALA4 ASN5 LYS6 LEU7 GLN8 GLN9 ALA10 VAL11 ASP12 GLN13 ALA14 TYR15 THR16 GLN17 PHE18 HIS19 SER20 LEU21 ASN22 GLY23 GLY24 GLN25 ASN26 ALA27 ASP28 TYR29 ILE30 PRO31 PHE32 LEU33 ALA34 ASN35 VAL36 PRO37 GLY38 GLN39 LEU40 ALA41 ALA42 VAL43 ALA44 ILE45 VAL46 THR47 CYS48 ASP49 GLY50 ASN51 VAL52 TYR53 SER54 ALA55 GLY56 ASP57 SER58 ASP59 TYR60 ARG61 PHE62 ALA63 LEU64 GLU65 SER66 ILE67 SER68 LYS69 VAL70 CYS71 THR72 LEU73 ALA74 LEU75 ALA76 LEU77 GLU78 ASP79 VAL80 GLY81 PRO82 GLN83 ALA84 VAL85 GLN86 ASP87 LYS88 ILE89 GLY90 ALA91 ASP92 PRO93 THR94 GLY95 LEU96 PRO97 PHE98 ASN99 SER100 VAL101 ILE102 ALA103 LEU104 GLU105 LEU106 HIS107 GLY108 GLY109 LYS110 PRO111 LEU112 SER113 PRO114 LEU115 VAL116 ASN117 ALA118 GLY119 ALA120 ILE121 ALA122 THR123 THR124 SER125 LEU126 ILE127 ASN128 ALA129 GLU130 ASN131 VAL132 GLU133 GLN134 ARG135 TRP136 GLN137 ARG138 ILE139 LEU140 HIS141 ILE142 GLN143 GLN144 GLN145 LEU146 ALA147 GLY148 GLU149 GLN150 VAL151 ALA152 LEU153 SER154 ASP155 GLU156 VAL157 ASN158 GLN159 SER160 GLU161 GLN162 THR163 THR164 ASN165 PHE166 HIS167 ASN168 ARG169 ALA170 ILE171 ALA172 TRP173 LEU174 LEU175 TYR176 SER177 ALA178 GLY179 TYR180 LEU181 TYR182 CYS183 ASP184 ALA185 MET186 GLU187 ALA188 CYS189 ASP190 VAL191 TYR192 THR193 ARG194 GLN195 CYS196 SER197 THR198 LEU199 LEU200 ASN201 THR202 ILE203 GLU204 LEU205 ALA206 THR207 LEU208 GLY209 ALA210 THR211 LEU212 ALA213 ALA214 GLY215 GLY216 VAL217 ASN218 PRO219 LEU220 THR221 HIS222 LYS223 ARG224 VAL225 LEU226 GLN227 ALA228 ASP229 ASN230 VAL231 PRO232 TYR233 ILE234 LEU235 ALA236 GLU237 MET238 MET239 MET240 GLU241 GLY242 LEU243 TYR244 GLY245 ARG246 SER247 GLY248 ASP249 TRP250 ALA251 TYR252 ARG253 VAL254 GLY255 LEU256 PRO257 GLY258 LYS259 SER260 GLY261 VAL262 GLY263 GLY264 GLY265 ILE266 LEU267 ALA268 VAL269 VAL270 PRO271 GLY272 VAL273 MET274 GLY275 ILE276 ALA277 ALA278 PHE279 SER280 PRO281 PRO282 LEU283 ASP284 GLU285 ASP286 GLY287 ASN288 SER289 VAL290 ARG291 GLY292 GLN293 LYS294 MET295 VAL296 ALA297 SER298 VAL299 ALA300 LYS301 GLN302 LEU303 GLY304 TYR305 ASN306 VAL307 PHE308 LYS309 GLY310

Ligands
Unit 5 EDO1203 EDO1204 EDO1205 EDO1211 FMT1212 EDO1217 FMT1218 EDO1219
Unit 6 FMT1206 FMT1207 FMT1209 EDO1210 EDO1224 FMT1225
Unit 7 EDO1208 FMT1222 FMT1226
Unit 8 EDO1213 EDO1214 FMT1215 EDO1216

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany