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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ACC DEAMINASE COMPLEXED WITH SUBSTRATE CHLORO-D-ALANINE
Keywords ACCD, COMPLEX, CRYSTAL, PLP, SUBSTRATE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1TZM     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  A 331 2514 0
2  Protein   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  B 328 2488 0
3  Protein   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  C 338 2571 0
4  Protein   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  D 329 2495 0
5  Ligand   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  A 3 0 28
6  Ligand   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  B 2 0 20
7  Ligand   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  C 3 0 28
8  Ligand   1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE  D 2 0 20
9 Water     412 0 412
total       1748 10068 508

Proteins
Unit 1 MET1 ASN2 LEU3 GLN4 ARG5 PHE6 PRO7 ARG8 TYR9 PRO10 LEU11 THR12 PHE13 GLY14 PRO15 THR16 PRO17 ILE18 GLN19 PRO20 LEU21 ALA22 ARG23 LEU24 SER25 LYS26 HIS27 LEU28 GLY29 GLY30 LYS31 VAL32 HIS33 LEU34 TYR35 ALA36 LYS37 ARG38 GLU39 ASP40 CYS41 ASN42 SER43 GLY44 LEU45 ALA46 PHE47 GLY48 GLY49 ASN50 LYS51 THR52 ARG53 LYS54 LEU55 GLU56 TYR57 LEU58 ILE59 PRO60 GLU61 ALA62 LEU63 ALA64 GLN65 GLY66 CYS67 ASP68 THR69 LEU70 VAL71 SER72 ILE73 GLY74 GLY75 ILE76 GLN77 SER78 ASN79 GLN80 THR81 ARG82 GLN83 VAL84 ALA85 ALA86 VAL87 ALA88 ALA89 HIS90 LEU91 GLY92 MET93 LYS94 CYS95 VAL96 LEU97 VAL98 GLN99 GLU100 ASN101 TRP102 VAL103 ASN104 TYR105 SER106 ASP107 ALA108 VAL109 TYR110 ASP111 ARG112 VAL113 GLY114 ASN115 ILE116 GLN117 MET118 SER119 ARG120 ILE121 LEU122 GLY123 ALA124 ASP125 VAL126 ARG127 LEU128 VAL129 PRO130 ASP131 ARG139 SER140 TRP141 GLU142 ASP143 ALA144 LEU145 GLU146 SER147 VAL148 ARG149 ALA150 ALA151 GLY152 GLY153 LYS154 PRO155 TYR156 ALA157 ILE158 PRO159 ALA160 GLY161 CYS162 SER163 ASP164 HIS165 PRO166 LEU167 GLY168 GLY169 LEU170 GLY171 PHE172 VAL173 GLY174 PHE175 ALA176 GLU177 GLU178 VAL179 ARG180 ALA181 GLN182 GLU183 ALA184 GLU185 LEU186 GLY187 PHE188 LYS189 PHE190 ASP191 TYR192 VAL193 VAL194 VAL195 CYS196 SER197 VAL198 THR199 GLY200 SER201 THR202 GLN203 ALA204 GLY205 MET206 VAL207 VAL208 GLY209 PHE210 ALA211 ALA212 ASP213 GLY214 ARG215 ALA216 ASP217 ARG218 VAL219 ILE220 GLY221 VAL222 ASP223 ALA224 SER225 ALA226 LYS227 PRO228 ALA229 GLN230 THR231 ARG232 GLU233 GLN234 ILE235 THR236 ARG237 ILE238 ALA239 ARG240 GLN241 THR242 ALA243 GLU244 LYS245 VAL246 GLY247 LEU248 GLU249 ARG250 ASP251 ILE252 MET253 ARG254 ALA255 ASP256 VAL257 VAL258 LEU259 ASP260 GLU261 ARG262 PHE263 ALA264 GLY265 PRO266 GLU267 TYR268 GLY269 LEU270 PRO271 ASN272 GLU273 GLY274 THR275 LEU276 GLU277 ALA278 ILE279 ARG280 LEU281 CYS282 ALA283 ARG284 THR285 GLU286 GLY287 MET288 LEU289 THR290 ASP291 PRO292 VAL293 TYR294 GLU295 GLY296 LYS297 SER298 MET299 HIS300 GLY301 MET302 ILE303 GLU304 MET305 VAL306 ARG307 ASN308 GLY309 GLU310 PHE311 PRO312 GLU313 GLY314 SER315 ARG316 VAL317 LEU318 TYR319 ALA320 HIS321 LEU322 GLY323 GLY324 VAL325 PRO326 ALA327 LEU328 ASN329 GLY330 TYR331 SER332 PHE333 ILE334 PHE335 ARG336 ASP337 GLY338
Unit 2 MET1 ASN2 LEU3 GLN4 ARG5 PHE6 PRO7 ARG8 TYR9 PRO10 LEU11 THR12 PHE13 GLY14 PRO15 THR16 PRO17 ILE18 GLN19 PRO20 LEU21 ALA22 ARG23 LEU24 SER25 LYS26 HIS27 LEU28 GLY29 GLY30 LYS31 VAL32 HIS33 LEU34 TYR35 ALA36 LYS37 ARG38 GLU39 ASP40 CYS41 ASN42 SER43 GLY44 LEU45 ALA46 PHE47 GLY48 GLY49 ASN50 LYS51 THR52 ARG53 LYS54 LEU55 GLU56 TYR57 LEU58 ILE59 PRO60 GLU61 ALA62 LEU63 ALA64 GLN65 GLY66 CYS67 ASP68 THR69 LEU70 VAL71 SER72 ILE73 GLY74 GLY75 ILE76 GLN77 SER78 ASN79 GLN80 THR81 ARG82 GLN83 VAL84 ALA85 ALA86 VAL87 ALA88 ALA89 HIS90 LEU91 GLY92 MET93 LYS94 CYS95 VAL96 LEU97 VAL98 GLN99 GLU100 ASN101 TRP102 VAL103 ASN104 TYR105 SER106 ASP107 ALA108 VAL109 TYR110 ASP111 ARG112 VAL113 GLY114 ASN115 ILE116 GLN117 MET118 SER119 ARG120 ILE121 LEU122 GLY123 ALA124 ASP125 VAL126 ARG127 LEU128 VAL129 SER140 TRP141 GLU142 ASP143 ALA144 LEU145 GLU146 SER147 VAL148 ARG149 ALA150 ALA151 GLY152 GLY153 LYS154 PRO155 TYR156 ALA157 ILE158 PRO159 ALA160 GLY161 CYS162 SER163 ASP164 HIS165 PRO166 LEU167 GLY168 GLY169 LEU170 GLY171 PHE172 VAL173 GLY174 PHE175 ALA176 GLU177 GLU178 VAL179 ARG180 ALA181 GLN182 GLU183 ALA184 GLU185 LEU186 GLY187 PHE188 LYS189 PHE190 ASP191 TYR192 VAL193 VAL194 VAL195 CYS196 SER197 VAL198 THR199 GLY200 SER201 THR202 GLN203 ALA204 GLY205 MET206 VAL207 VAL208 GLY209 PHE210 ALA211 ALA212 ASP213 GLY214 ARG215 ALA216 ASP217 ARG218 VAL219 ILE220 GLY221 VAL222 ASP223 ALA224 SER225 ALA226 LYS227 PRO228 ALA229 GLN230 THR231 ARG232 GLU233 GLN234 ILE235 THR236 ARG237 ILE238 ALA239 ARG240 GLN241 THR242 ALA243 GLU244 LYS245 VAL246 GLY247 LEU248 GLU249 ARG250 ASP251 ILE252 MET253 ARG254 ALA255 ASP256 VAL257 VAL258 LEU259 ASP260 GLU261 ARG262 PHE263 ALA264 GLY265 PRO266 GLU267 TYR268 GLY269 LEU270 PRO271 ASN272 GLU273 GLY274 THR275 LEU276 GLU277 ALA278 ILE279 ARG280 LEU281 CYS282 ALA283 ARG284 THR285 GLU286 GLY287 MET288 LEU289 THR290 ASP291 PRO292 VAL293 TYR294 GLU295 GLY296 LYS297 SER298 MET299 HIS300 GLY301 MET302 ILE303 GLU304 MET305 VAL306 ARG307 ASN308 GLY309 GLU310 PHE311 PRO312 GLU313 GLY314 SER315 ARG316 VAL317 LEU318 TYR319 ALA320 HIS321 LEU322 GLY323 GLY324 VAL325 PRO326 ALA327 LEU328 ASN329 GLY330 TYR331 SER332 PHE333 ILE334 PHE335 ARG336 ASP337 GLY338
Unit 3 MET1 ASN2 LEU3 GLN4 ARG5 PHE6 PRO7 ARG8 TYR9 PRO10 LEU11 THR12 PHE13 GLY14 PRO15 THR16 PRO17 ILE18 GLN19 PRO20 LEU21 ALA22 ARG23 LEU24 SER25 LYS26 HIS27 LEU28 GLY29 GLY30 LYS31 VAL32 HIS33 LEU34 TYR35 ALA36 LYS37 ARG38 GLU39 ASP40 CYS41 ASN42 SER43 GLY44 LEU45 ALA46 PHE47 GLY48 GLY49 ASN50 LYS51 THR52 ARG53 LYS54 LEU55 GLU56 TYR57 LEU58 ILE59 PRO60 GLU61 ALA62 LEU63 ALA64 GLN65 GLY66 CYS67 ASP68 THR69 LEU70 VAL71 SER72 ILE73 GLY74 GLY75 ILE76 GLN77 SER78 ASN79 GLN80 THR81 ARG82 GLN83 VAL84 ALA85 ALA86 VAL87 ALA88 ALA89 HIS90 LEU91 GLY92 MET93 LYS94 CYS95 VAL96 LEU97 VAL98 GLN99 GLU100 ASN101 TRP102 VAL103 ASN104 TYR105 SER106 ASP107 ALA108 VAL109 TYR110 ASP111 ARG112 VAL113 GLY114 ASN115 ILE116 GLN117 MET118 SER119 ARG120 ILE121 LEU122 GLY123 ALA124 ASP125 VAL126 ARG127 LEU128 VAL129 PRO130 ASP131 GLY132 PHE133 ASP134 ILE135 GLY136 PHE137 ARG138 ARG139 SER140 TRP141 GLU142 ASP143 ALA144 LEU145 GLU146 SER147 VAL148 ARG149 ALA150 ALA151 GLY152 GLY153 LYS154 PRO155 TYR156 ALA157 ILE158 PRO159 ALA160 GLY161 CYS162 SER163 ASP164 HIS165 PRO166 LEU167 GLY168 GLY169 LEU170 GLY171 PHE172 VAL173 GLY174 PHE175 ALA176 GLU177 GLU178 VAL179 ARG180 ALA181 GLN182 GLU183 ALA184 GLU185 LEU186 GLY187 PHE188 LYS189 PHE190 ASP191 TYR192 VAL193 VAL194 VAL195 CYS196 SER197 VAL198 THR199 GLY200 SER201 THR202 GLN203 ALA204 GLY205 MET206 VAL207 VAL208 GLY209 PHE210 ALA211 ALA212 ASP213 GLY214 ARG215 ALA216 ASP217 ARG218 VAL219 ILE220 GLY221 VAL222 ASP223 ALA224 SER225 ALA226 LYS227 PRO228 ALA229 GLN230 THR231 ARG232 GLU233 GLN234 ILE235 THR236 ARG237 ILE238 ALA239 ARG240 GLN241 THR242 ALA243 GLU244 LYS245 VAL246 GLY247 LEU248 GLU249 ARG250 ASP251 ILE252 MET253 ARG254 ALA255 ASP256 VAL257 VAL258 LEU259 ASP260 GLU261 ARG262 PHE263 ALA264 GLY265 PRO266 GLU267 TYR268 GLY269 LEU270 PRO271 ASN272 GLU273 GLY274 THR275 LEU276 GLU277 ALA278 ILE279 ARG280 LEU281 CYS282 ALA283 ARG284 THR285 GLU286 GLY287 MET288 LEU289 THR290 ASP291 PRO292 VAL293 TYR294 GLU295 GLY296 LYS297 SER298 MET299 HIS300 GLY301 MET302 ILE303 GLU304 MET305 VAL306 ARG307 ASN308 GLY309 GLU310 PHE311 PRO312 GLU313 GLY314 SER315 ARG316 VAL317 LEU318 TYR319 ALA320 HIS321 LEU322 GLY323 GLY324 VAL325 PRO326 ALA327 LEU328 ASN329 GLY330 TYR331 SER332 PHE333 ILE334 PHE335 ARG336 ASP337 GLY338
Unit 4 MET1 ASN2 LEU3 GLN4 ARG5 PHE6 PRO7 ARG8 TYR9 PRO10 LEU11 THR12 PHE13 GLY14 PRO15 THR16 PRO17 ILE18 GLN19 PRO20 LEU21 ALA22 ARG23 LEU24 SER25 LYS26 HIS27 LEU28 GLY29 GLY30 LYS31 VAL32 HIS33 LEU34 TYR35 ALA36 LYS37 ARG38 GLU39 ASP40 CYS41 ASN42 SER43 GLY44 LEU45 ALA46 PHE47 GLY48 GLY49 ASN50 LYS51 THR52 ARG53 LYS54 LEU55 GLU56 TYR57 LEU58 ILE59 PRO60 GLU61 ALA62 LEU63 ALA64 GLN65 GLY66 CYS67 ASP68 THR69 LEU70 VAL71 SER72 ILE73 GLY74 GLY75 ILE76 GLN77 SER78 ASN79 GLN80 THR81 ARG82 GLN83 VAL84 ALA85 ALA86 VAL87 ALA88 ALA89 HIS90 LEU91 GLY92 MET93 LYS94 CYS95 VAL96 LEU97 VAL98 GLN99 GLU100 ASN101 TRP102 VAL103 ASN104 TYR105 SER106 ASP107 ALA108 VAL109 TYR110 ASP111 ARG112 VAL113 GLY114 ASN115 ILE116 GLN117 MET118 SER119 ARG120 ILE121 LEU122 GLY123 ALA124 ASP125 VAL126 ARG127 LEU128 VAL129 ARG139 SER140 TRP141 GLU142 ASP143 ALA144 LEU145 GLU146 SER147 VAL148 ARG149 ALA150 ALA151 GLY152 GLY153 LYS154 PRO155 TYR156 ALA157 ILE158 PRO159 ALA160 GLY161 CYS162 SER163 ASP164 HIS165 PRO166 LEU167 GLY168 GLY169 LEU170 GLY171 PHE172 VAL173 GLY174 PHE175 ALA176 GLU177 GLU178 VAL179 ARG180 ALA181 GLN182 GLU183 ALA184 GLU185 LEU186 GLY187 PHE188 LYS189 PHE190 ASP191 TYR192 VAL193 VAL194 VAL195 CYS196 SER197 VAL198 THR199 GLY200 SER201 THR202 GLN203 ALA204 GLY205 MET206 VAL207 VAL208 GLY209 PHE210 ALA211 ALA212 ASP213 GLY214 ARG215 ALA216 ASP217 ARG218 VAL219 ILE220 GLY221 VAL222 ASP223 ALA224 SER225 ALA226 LYS227 PRO228 ALA229 GLN230 THR231 ARG232 GLU233 GLN234 ILE235 THR236 ARG237 ILE238 ALA239 ARG240 GLN241 THR242 ALA243 GLU244 LYS245 VAL246 GLY247 LEU248 GLU249 ARG250 ASP251 ILE252 MET253 ARG254 ALA255 ASP256 VAL257 VAL258 LEU259 ASP260 GLU261 ARG262 PHE263 ALA264 GLY265 PRO266 GLU267 TYR268 GLY269 LEU270 PRO271 ASN272 GLU273 GLY274 THR275 LEU276 GLU277 ALA278 ILE279 ARG280 LEU281 CYS282 ALA283 ARG284 THR285 GLU286 GLY287 MET288 LEU289 THR290 ASP291 PRO292 VAL293 TYR294 GLU295 GLY296 LYS297 SER298 MET299 HIS300 GLY301 MET302 ILE303 GLU304 MET305 VAL306 ARG307 ASN308 GLY309 GLU310 PHE311 PRO312 GLU313 GLY314 SER315 ARG316 VAL317 LEU318 TYR319 ALA320 HIS321 LEU322 GLY323 GLY324 VAL325 PRO326 ALA327 LEU328 ASN329 GLY330 TYR331 SER332 PHE333 ILE334 PHE335 ARG336 ASP337 GLY338

Ligands
Unit 5 PLP401 C2N501 NAK601
Unit 6 PLP401 SO4701
Unit 7 PLP401 C2N502 NAK602
Unit 8 PLP401 SO4702

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany