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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE VPS9 DOMAIN OF RABEX-5
Keywords VPS9 DOMAIN, RAB5 GUANINE-NUCLEOTIDE EXCHANGE FACTOR, GEF, P TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1TXU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RAB5 GDP/GTP EXCHANGE FACTOR  A 254 2008 72
2  Ligand   RAB5 GDP/GTP EXCHANGE FACTOR  A 1 0 1
3 Water     82 0 82
total       337 2008 155

Proteins
Unit 1 GLU134 THR135 ASP136 ARG137 VAL138 SER139 LYS140 GLU141 PHE142 ILE143 GLU144 PHE145 LEU146 LYS147 THR148 PHE149 HIS150 LYS151 THR152 GLY153 GLN154 GLU155 ILE156 TYR157 LYS158 GLN159 THR160 LYS161 LEU162 PHE163 LEU164 GLU165 GLY166 MSE167 HIS168 TYR169 LYS170 ARG171 ASP172 LEU173 SER174 ILE175 GLU176 GLU177 GLN178 SER179 GLU180 CYS181 ALA182 GLN183 ASP184 PHE185 TYR186 HIS187 ASN188 VAL189 ALA190 GLU191 ARG192 MSE193 GLN194 THR195 ARG196 GLY197 LYS198 VAL199 PRO200 PRO201 GLU202 ARG203 VAL204 GLU205 LYS206 ILE207 MSE208 ASP209 GLN210 ILE211 GLU212 LYS213 TYR214 ILE215 MSE216 THR217 ARG218 LEU219 TYR220 LYS221 TYR222 VAL223 PHE224 CYS225 PRO226 GLU227 THR228 THR229 ASP230 ASP231 GLU232 LYS233 LYS234 ASP235 LEU236 ALA237 ILE238 GLN239 LYS240 ARG241 ILE242 ARG243 ALA244 LEU245 ARG246 TRP247 VAL248 THR249 PRO250 GLN251 MSE252 LEU253 CYS254 VAL255 PRO256 VAL257 ASN258 GLU259 ASP260 ILE261 PRO262 GLU263 VAL264 SER265 ASP266 MSE267 VAL268 VAL269 LYS270 ALA271 ILE272 THR273 ASP274 ILE275 ILE276 GLU277 MSE278 ASP279 SER280 LYS281 ARG282 VAL283 PRO284 ARG285 ASP286 LYS287 LEU288 ALA289 CYS290 ILE291 THR292 LYS293 CYS294 SER295 LYS296 HIS297 ILE298 PHE299 ASN300 ALA301 ILE302 LYS303 ILE304 THR305 LYS306 ASN307 GLU308 PRO309 ALA310 SER311 ALA312 ASP313 ASP314 PHE315 LEU316 PRO317 THR318 LEU319 ILE320 TYR321 ILE322 VAL323 LEU324 LYS325 GLY326 ASN327 PRO328 PRO329 ARG330 LEU331 GLN332 SER333 ASN334 ILE335 GLN336 TYR337 ILE338 THR339 ARG340 PHE341 CYS342 ASN343 PRO344 SER345 ARG346 LEU347 MSE348 THR349 GLY350 GLU351 ASP352 GLY353 TYR354 TYR355 PHE356 THR357 ASN358 LEU359 CYS360 CYS361 ALA362 VAL363 ALA364 PHE365 ILE366 GLU367 LYS368 LEU369 ASP370 ALA371 GLN372 SER373 LEU374 ASN375 LEU376 SER377 GLN378 GLU379 ASP380 PHE381 ASP382 ARG383 TYR384 MSE385 SER386 GLY387

Ligands
Unit 2 MG1

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany