1TU4 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF RAB5-GDP COMPLEX
• Keywords: RAB5, GTPASE, PROTEIN TRANSPORT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1TU4	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RAS-RELATED PROTEIN RAB-5A	A	169	1294	32
2	Protein	RAS-RELATED PROTEIN RAB-5A	B	162	1234	32
3	Protein	RAS-RELATED PROTEIN RAB-5A	C	169	1294	32
4	Protein	RAS-RELATED PROTEIN RAB-5A	D	164	1252	32
5	Ligand	RAS-RELATED PROTEIN RAB-5A	A	2	0	29
6	Ligand	RAS-RELATED PROTEIN RAB-5A	B	5	0	40
7	Ligand	RAS-RELATED PROTEIN RAB-5A	C	2	0	29
8	Ligand	RAS-RELATED PROTEIN RAB-5A	D	7	0	50
9	Water			309	0	309
total				989	5074	585

Proteins

Unit 1	GLY 15 ASN 16 LYS 17 ILE 18 CYS 19 GLN 20 PHE 21 LYS 22 LEU 23 VAL 24 LEU 25 LEU 26 GLY 27 GLU 28 SER 29 ALA 30 VAL 31 GLY 32 LYS 33 SER 34 SER 35 LEU 36 VAL 37 LEU 38 ARG 39 PHE 40 VAL 41 LYS 42 GLY 43 GLN 44 PHE 45 HIS 46 GLU 47 PHE 48 GLN 49 GLU 50 SER 51 THR 52 ILE 53 GLY 54 ALA 55 ALA 56 PHE 57 LEU 58 THR 59 GLN 60 THR 61 VAL 62 CYS 63 LEU 64 ASP 65 ASP 66 THR 67 THR 68 VAL 69 LYS 70 PHE 71 GLU 72 ILE 73 TRP 74 ASP 75 THR 76 ALA 77 GLY 78 GLN 79 GLU 80 ARG 81 TYR 82 HIS 83 SER 84 LEU 85 ALA 86 PRO 87 MSE 88 TYR 89 TYR 90 ARG 91 GLY 92 ALA 93 GLN 94 ALA 95 ALA 96 ILE 97 VAL 98 VAL 99 TYR 100 ASP 101 ILE 102 THR 103 ASN 104 GLU 105 GLU 106 SER 107 PHE 108 ALA 109 ARG 110 ALA 111 LYS 112 ASN 113 TRP 114 VAL 115 LYS 116 GLU 117 LEU 118 GLN 119 ARG 120 GLN 121 ALA 122 SER 123 PRO 124 ASN 125 ILE 126 VAL 127 ILE 128 ALA 129 LEU 130 SER 131 GLY 132 ASN 133 LYS 134 ALA 135 ASP 136 LEU 137 ALA 138 ASN 139 LYS 140 ARG 141 ALA 142 VAL 143 ASP 144 PHE 145 GLN 146 GLU 147 ALA 148 GLN 149 SER 150 TYR 151 ALA 152 ASP 153 ASP 154 ASN 155 SER 156 LEU 157 LEU 158 PHE 159 MSE 160 GLU 161 THR 162 SER 163 ALA 164 LYS 165 THR 166 SER 167 MSE 168 ASN 169 VAL 170 ASN 171 GLU 172 ILE 173 PHE 174 MSE 175 ALA 176 ILE 177 ALA 178 LYS 179 LYS 180 LEU 181 PRO 182 LYS 183
Unit 2	ILE 18 CYS 19 GLN 20 PHE 21 LYS 22 LEU 23 VAL 24 LEU 25 LEU 26 GLY 27 GLU 28 SER 29 ALA 30 VAL 31 GLY 32 LYS 33 SER 34 SER 35 LEU 36 VAL 37 LEU 38 ARG 39 PHE 40 VAL 41 LYS 42 GLY 43 GLN 44 PHE 45 GLN 49 GLU 50 SER 51 THR 52 ILE 53 GLY 54 ALA 55 ALA 56 PHE 57 LEU 58 THR 59 GLN 60 THR 61 VAL 62 CYS 63 LEU 64 ASP 65 ASP 66 THR 67 THR 68 VAL 69 LYS 70 PHE 71 GLU 72 ILE 73 TRP 74 ASP 75 THR 76 ALA 77 GLY 78 GLN 79 GLU 80 ARG 81 TYR 82 HIS 83 SER 84 LEU 85 ALA 86 PRO 87 MSE 88 TYR 89 TYR 90 ARG 91 GLY 92 ALA 93 GLN 94 ALA 95 ALA 96 ILE 97 VAL 98 VAL 99 TYR 100 ASP 101 ILE 102 THR 103 ASN 104 GLU 105 GLU 106 SER 107 PHE 108 ALA 109 ARG 110 ALA 111 LYS 112 ASN 113 TRP 114 VAL 115 LYS 116 GLU 117 LEU 118 GLN 119 ARG 120 GLN 121 ALA 122 SER 123 PRO 124 ASN 125 ILE 126 VAL 127 ILE 128 ALA 129 LEU 130 SER 131 GLY 132 ASN 133 LYS 134 ALA 135 ASP 136 LEU 137 ALA 138 ASN 139 LYS 140 ARG 141 ALA 142 VAL 143 ASP 144 PHE 145 GLN 146 GLU 147 ALA 148 GLN 149 SER 150 TYR 151 ALA 152 ASP 153 ASP 154 ASN 155 SER 156 LEU 157 LEU 158 PHE 159 MSE 160 GLU 161 THR 162 SER 163 ALA 164 LYS 165 THR 166 SER 167 MSE 168 ASN 169 VAL 170 ASN 171 GLU 172 ILE 173 PHE 174 MSE 175 ALA 176 ILE 177 ALA 178 LYS 179 LYS 180 LEU 181 PRO 182
Unit 3	GLY 15 ASN 16 LYS 17 ILE 18 CYS 19 GLN 20 PHE 21 LYS 22 LEU 23 VAL 24 LEU 25 LEU 26 GLY 27 GLU 28 SER 29 ALA 30 VAL 31 GLY 32 LYS 33 SER 34 SER 35 LEU 36 VAL 37 LEU 38 ARG 39 PHE 40 VAL 41 LYS 42 GLY 43 GLN 44 PHE 45 HIS 46 GLU 47 PHE 48 GLN 49 GLU 50 SER 51 THR 52 ILE 53 GLY 54 ALA 55 ALA 56 PHE 57 LEU 58 THR 59 GLN 60 THR 61 VAL 62 CYS 63 LEU 64 ASP 65 ASP 66 THR 67 THR 68 VAL 69 LYS 70 PHE 71 GLU 72 ILE 73 TRP 74 ASP 75 THR 76 ALA 77 GLY 78 GLN 79 GLU 80 ARG 81 TYR 82 HIS 83 SER 84 LEU 85 ALA 86 PRO 87 MSE 88 TYR 89 TYR 90 ARG 91 GLY 92 ALA 93 GLN 94 ALA 95 ALA 96 ILE 97 VAL 98 VAL 99 TYR 100 ASP 101 ILE 102 THR 103 ASN 104 GLU 105 GLU 106 SER 107 PHE 108 ALA 109 ARG 110 ALA 111 LYS 112 ASN 113 TRP 114 VAL 115 LYS 116 GLU 117 LEU 118 GLN 119 ARG 120 GLN 121 ALA 122 SER 123 PRO 124 ASN 125 ILE 126 VAL 127 ILE 128 ALA 129 LEU 130 SER 131 GLY 132 ASN 133 LYS 134 ALA 135 ASP 136 LEU 137 ALA 138 ASN 139 LYS 140 ARG 141 ALA 142 VAL 143 ASP 144 PHE 145 GLN 146 GLU 147 ALA 148 GLN 149 SER 150 TYR 151 ALA 152 ASP 153 ASP 154 ASN 155 SER 156 LEU 157 LEU 158 PHE 159 MSE 160 GLU 161 THR 162 SER 163 ALA 164 LYS 165 THR 166 SER 167 MSE 168 ASN 169 VAL 170 ASN 171 GLU 172 ILE 173 PHE 174 MSE 175 ALA 176 ILE 177 ALA 178 LYS 179 LYS 180 LEU 181 PRO 182 LYS 183
Unit 4	ASN 16 LYS 17 ILE 18 CYS 19 GLN 20 PHE 21 LYS 22 LEU 23 VAL 24 LEU 25 LEU 26 GLY 27 GLU 28 SER 29 ALA 30 VAL 31 GLY 32 LYS 33 SER 34 SER 35 LEU 36 VAL 37 LEU 38 ARG 39 PHE 40 VAL 41 LYS 42 GLY 43 GLN 44 PHE 45 HIS 46 GLU 47 SER 51 THR 52 ILE 53 GLY 54 ALA 55 ALA 56 PHE 57 LEU 58 THR 59 GLN 60 THR 61 VAL 62 CYS 63 LEU 64 ASP 65 ASP 66 THR 67 THR 68 VAL 69 LYS 70 PHE 71 GLU 72 ILE 73 TRP 74 ASP 75 THR 76 ALA 77 GLY 78 GLN 79 GLU 80 ARG 81 TYR 82 HIS 83 SER 84 LEU 85 ALA 86 PRO 87 MSE 88 TYR 89 TYR 90 ARG 91 GLY 92 ALA 93 GLN 94 ALA 95 ALA 96 ILE 97 VAL 98 VAL 99 TYR 100 ASP 101 ILE 102 THR 103 ASN 104 GLU 105 GLU 106 SER 107 PHE 108 ALA 109 ARG 110 ALA 111 LYS 112 ASN 113 TRP 114 VAL 115 LYS 116 GLU 117 LEU 118 GLN 119 ARG 120 GLN 121 ALA 122 SER 123 PRO 124 ASN 125 ILE 126 VAL 127 ILE 128 ALA 129 LEU 130 SER 131 GLY 132 ASN 133 LYS 134 ALA 135 ASP 136 LEU 137 ALA 138 ASN 139 LYS 140 ARG 141 ALA 142 VAL 143 ASP 144 PHE 145 GLN 146 GLU 147 ALA 148 GLN 149 SER 150 TYR 151 ALA 152 ASP 153 ASP 154 ASN 155 SER 156 LEU 157 LEU 158 PHE 159 MSE 160 GLU 161 THR 162 SER 163 ALA 164 LYS 165 THR 166 SER 167 MSE 168 ASN 169 VAL 170 ASN 171 GLU 172 ILE 173 PHE 174 MSE 175 ALA 176 ILE 177 ALA 178 LYS 179 LYS 180 LEU 181 PRO 182

Ligands

Unit 5	GDP 1200 CO 1201
Unit 6	CO 251 SO4 261 SO4 264 GDP 2200 CO 2201
Unit 7	GDP 3200 CO 3201
Unit 8	CO 252 SO4 262 SO4 263 SO4 265 SO4 266 GDP 4200 CO 4201