Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE RNA-DEPENDENT RNA POLYMERASE FROM HUMAN RHINOVIRUS 16
Keywords RHINOVIRUS, RNA, POLYMERASE, 3D, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1TP7     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GENOME POLYPROTEIN  A 460 3606 80
2  Protein   GENOME POLYPROTEIN  B 460 3606 80
3  Protein   GENOME POLYPROTEIN  C 460 3606 80
4  Protein   GENOME POLYPROTEIN  D 460 3606 80
5  Ligand   GENOME POLYPROTEIN  A 2 0 22
6  Ligand   GENOME POLYPROTEIN  B 1 0 5
7  Ligand   GENOME POLYPROTEIN  C 1 0 5
8  Ligand   GENOME POLYPROTEIN  D 1 0 5
9 Water     270 0 270
total       2115 14424 627
Proteins
Unit 1 GLY1 GLN2 ILE3 GLN4 ILE5 SER6 LYS7 HIS8 VAL9 LYS10 ASP11 VAL12 GLY13 LEU14 PRO15 SER16 ILE17 HIS18 THR19 PRO20 THR21 LYS22 THR23 LYS24 LEU25 GLN26 PRO27 SER28 VAL29 PHE30 TYR31 ASP32 ILE33 PHE34 PRO35 GLY36 SER37 LYS38 GLU39 PRO40 ALA41 VAL42 LEU43 THR44 GLU45 LYS46 ASP47 PRO48 ARG49 LEU50 LYS51 VAL52 ASP53 PHE54 ASP55 SER56 ALA57 LEU58 PHE59 SER60 LYS61 TYR62 LYS63 GLY64 ASN65 THR66 GLU67 CYS68 SER69 LEU70 ASN71 GLU72 HIS73 ILE74 GLN75 VAL76 ALA77 VAL78 ALA79 HIS80 TYR81 SER82 ALA83 GLN84 LEU85 ALA86 THR87 LEU88 ASP89 ILE90 ASP91 PRO92 GLN93 PRO94 ILE95 ALA96 MSE97 GLU98 ASP99 SER100 VAL101 PHE102 GLY103 MSE104 ASP105 GLY106 LEU107 GLU108 ALA109 LEU110 ASP111 LEU112 ASN113 THR114 SER115 ALA116 GLY117 TYR118 PRO119 TYR120 VAL121 THR122 LEU123 GLY124 ILE125 LYS126 LYS127 LYS128 ASP129 LEU130 ILE131 ASN132 ASN133 LYS134 THR135 LYS136 ASP137 ILE138 SER139 LYS140 LEU141 LYS142 LEU143 ALA144 LEU145 ASP146 LYS147 TYR148 ASP149 VAL150 ASP151 LEU152 PRO153 MSE154 ILE155 THR156 PHE157 LEU158 LYS159 ASP160 GLU161 LEU162 ARG163 LYS164 LYS165 ASP166 LYS167 ILE168 ALA169 ALA170 GLY171 LYS172 THR173 ARG174 VAL175 ILE176 GLU177 ALA178 SER179 SER180 ILE181 ASN182 ASP183 THR184 ILE185 LEU186 PHE187 ARG188 THR189 VAL190 TYR191 GLY192 ASN193 LEU194 PHE195 SER196 LYS197 PHE198 HIS199 LEU200 ASN201 PRO202 GLY203 VAL204 VAL205 THR206 GLY207 CYS208 ALA209 VAL210 GLY211 CYS212 ASP213 PRO214 GLU215 THR216 PHE217 TRP218 SER219 LYS220 ILE221 PRO222 LEU223 MSE224 LEU225 ASP226 GLY227 ASP228 CYS229 ILE230 MSE231 ALA232 PHE233 ASP234 TYR235 THR236 ASN237 TYR238 ASP239 GLY240 SER241 ILE242 HIS243 PRO244 ILE245 TRP246 PHE247 LYS248 ALA249 LEU250 GLY251 MSE252 VAL253 LEU254 ASP255 ASN256 LEU257 SER258 PHE259 ASN260 PRO261 THR262 LEU263 ILE264 ASN265 ARG266 LEU267 CYS268 ASN269 SER270 LYS271 HIS272 ILE273 PHE274 LYS275 SER276 THR277 TYR278 TYR279 GLU280 VAL281 GLU282 GLY283 GLY284 VAL285 PRO286 SER287 GLY288 CYS289 SER290 GLY291 THR292 SER293 ILE294 PHE295 ASN296 SER297 MSE298 ILE299 ASN300 ASN301 ILE302 ILE303 ILE304 ARG305 THR306 LEU307 VAL308 LEU309 ASP310 ALA311 TYR312 LYS313 HIS314 ILE315 ASP316 LEU317 ASP318 LYS319 LEU320 LYS321 ILE322 ILE323 ALA324 TYR325 GLY326 ASP327 ASP328 VAL329 ILE330 PHE331 SER332 TYR333 LYS334 TYR335 LYS336 LEU337 ASP338 MSE339 GLU340 ALA341 ILE342 ALA343 LYS344 GLU345 GLY346 GLN347 LYS348 TYR349 GLY350 LEU351 THR352 ILE353 THR354 PRO355 ALA356 ASP357 LYS358 SER359 SER360 GLU361 PHE362 LYS363 GLU364 LEU365 ASP366 TYR367 GLY368 ASN369 VAL370 THR371 PHE372 LEU373 LYS374 ARG375 GLY376 PHE377 ARG378 GLN379 ASP380 ASP381 LYS382 TYR383 LYS384 PHE385 LEU386 ILE387 HIS388 PRO389 THR390 PHE391 PRO392 VAL393 GLU394 GLU395 ILE396 TYR397 GLU398 SER399 ILE400 ARG401 TRP402 THR403 LYS404 LYS405 PRO406 SER407 GLN408 MSE409 GLN410 GLU411 HIS412 VAL413 LEU414 SER415 LEU416 CYS417 HIS418 LEU419 MSE420 TRP421 HIS422 ASN423 GLY424 PRO425 GLU426 ILE427 TYR428 LYS429 ASP430 PHE431 GLU432 THR433 LYS434 ILE435 ARG436 SER437 VAL438 SER439 ALA440 GLY441 ARG442 ALA443 LEU444 TYR445 ILE446 PRO447 PRO448 TYR449 GLU450 LEU451 LEU452 ARG453 HIS454 GLU455 TRP456 TYR457 GLU458 LYS459 PHE460
Unit 2 GLY1 GLN2 ILE3 GLN4 ILE5 SER6 LYS7 HIS8 VAL9 LYS10 ASP11 VAL12 GLY13 LEU14 PRO15 SER16 ILE17 HIS18 THR19 PRO20 THR21 LYS22 THR23 LYS24 LEU25 GLN26 PRO27 SER28 VAL29 PHE30 TYR31 ASP32 ILE33 PHE34 PRO35 GLY36 SER37 LYS38 GLU39 PRO40 ALA41 VAL42 LEU43 THR44 GLU45 LYS46 ASP47 PRO48 ARG49 LEU50 LYS51 VAL52 ASP53 PHE54 ASP55 SER56 ALA57 LEU58 PHE59 SER60 LYS61 TYR62 LYS63 GLY64 ASN65 THR66 GLU67 CYS68 SER69 LEU70 ASN71 GLU72 HIS73 ILE74 GLN75 VAL76 ALA77 VAL78 ALA79 HIS80 TYR81 SER82 ALA83 GLN84 LEU85 ALA86 THR87 LEU88 ASP89 ILE90 ASP91 PRO92 GLN93 PRO94 ILE95 ALA96 MSE97 GLU98 ASP99 SER100 VAL101 PHE102 GLY103 MSE104 ASP105 GLY106 LEU107 GLU108 ALA109 LEU110 ASP111 LEU112 ASN113 THR114 SER115 ALA116 GLY117 TYR118 PRO119 TYR120 VAL121 THR122 LEU123 GLY124 ILE125 LYS126 LYS127 LYS128 ASP129 LEU130 ILE131 ASN132 ASN133 LYS134 THR135 LYS136 ASP137 ILE138 SER139 LYS140 LEU141 LYS142 LEU143 ALA144 LEU145 ASP146 LYS147 TYR148 ASP149 VAL150 ASP151 LEU152 PRO153 MSE154 ILE155 THR156 PHE157 LEU158 LYS159 ASP160 GLU161 LEU162 ARG163 LYS164 LYS165 ASP166 LYS167 ILE168 ALA169 ALA170 GLY171 LYS172 THR173 ARG174 VAL175 ILE176 GLU177 ALA178 SER179 SER180 ILE181 ASN182 ASP183 THR184 ILE185 LEU186 PHE187 ARG188 THR189 VAL190 TYR191 GLY192 ASN193 LEU194 PHE195 SER196 LYS197 PHE198 HIS199 LEU200 ASN201 PRO202 GLY203 VAL204 VAL205 THR206 GLY207 CYS208 ALA209 VAL210 GLY211 CYS212 ASP213 PRO214 GLU215 THR216 PHE217 TRP218 SER219 LYS220 ILE221 PRO222 LEU223 MSE224 LEU225 ASP226 GLY227 ASP228 CYS229 ILE230 MSE231 ALA232 PHE233 ASP234 TYR235 THR236 ASN237 TYR238 ASP239 GLY240 SER241 ILE242 HIS243 PRO244 ILE245 TRP246 PHE247 LYS248 ALA249 LEU250 GLY251 MSE252 VAL253 LEU254 ASP255 ASN256 LEU257 SER258 PHE259 ASN260 PRO261 THR262 LEU263 ILE264 ASN265 ARG266 LEU267 CYS268 ASN269 SER270 LYS271 HIS272 ILE273 PHE274 LYS275 SER276 THR277 TYR278 TYR279 GLU280 VAL281 GLU282 GLY283 GLY284 VAL285 PRO286 SER287 GLY288 CYS289 SER290 GLY291 THR292 SER293 ILE294 PHE295 ASN296 SER297 MSE298 ILE299 ASN300 ASN301 ILE302 ILE303 ILE304 ARG305 THR306 LEU307 VAL308 LEU309 ASP310 ALA311 TYR312 LYS313 HIS314 ILE315 ASP316 LEU317 ASP318 LYS319 LEU320 LYS321 ILE322 ILE323 ALA324 TYR325 GLY326 ASP327 ASP328 VAL329 ILE330 PHE331 SER332 TYR333 LYS334 TYR335 LYS336 LEU337 ASP338 MSE339 GLU340 ALA341 ILE342 ALA343 LYS344 GLU345 GLY346 GLN347 LYS348 TYR349 GLY350 LEU351 THR352 ILE353 THR354 PRO355 ALA356 ASP357 LYS358 SER359 SER360 GLU361 PHE362 LYS363 GLU364 LEU365 ASP366 TYR367 GLY368 ASN369 VAL370 THR371 PHE372 LEU373 LYS374 ARG375 GLY376 PHE377 ARG378 GLN379 ASP380 ASP381 LYS382 TYR383 LYS384 PHE385 LEU386 ILE387 HIS388 PRO389 THR390 PHE391 PRO392 VAL393 GLU394 GLU395 ILE396 TYR397 GLU398 SER399 ILE400 ARG401 TRP402 THR403 LYS404 LYS405 PRO406 SER407 GLN408 MSE409 GLN410 GLU411 HIS412 VAL413 LEU414 SER415 LEU416 CYS417 HIS418 LEU419 MSE420 TRP421 HIS422 ASN423 GLY424 PRO425 GLU426 ILE427 TYR428 LYS429 ASP430 PHE431 GLU432 THR433 LYS434 ILE435 ARG436 SER437 VAL438 SER439 ALA440 GLY441 ARG442 ALA443 LEU444 TYR445 ILE446 PRO447 PRO448 TYR449 GLU450 LEU451 LEU452 ARG453 HIS454 GLU455 TRP456 TYR457 GLU458 LYS459 PHE460
Unit 3 GLY1 GLN2 ILE3 GLN4 ILE5 SER6 LYS7 HIS8 VAL9 LYS10 ASP11 VAL12 GLY13 LEU14 PRO15 SER16 ILE17 HIS18 THR19 PRO20 THR21 LYS22 THR23 LYS24 LEU25 GLN26 PRO27 SER28 VAL29 PHE30 TYR31 ASP32 ILE33 PHE34 PRO35 GLY36 SER37 LYS38 GLU39 PRO40 ALA41 VAL42 LEU43 THR44 GLU45 LYS46 ASP47 PRO48 ARG49 LEU50 LYS51 VAL52 ASP53 PHE54 ASP55 SER56 ALA57 LEU58 PHE59 SER60 LYS61 TYR62 LYS63 GLY64 ASN65 THR66 GLU67 CYS68 SER69 LEU70 ASN71 GLU72 HIS73 ILE74 GLN75 VAL76 ALA77 VAL78 ALA79 HIS80 TYR81 SER82 ALA83 GLN84 LEU85 ALA86 THR87 LEU88 ASP89 ILE90 ASP91 PRO92 GLN93 PRO94 ILE95 ALA96 MSE97 GLU98 ASP99 SER100 VAL101 PHE102 GLY103 MSE104 ASP105 GLY106 LEU107 GLU108 ALA109 LEU110 ASP111 LEU112 ASN113 THR114 SER115 ALA116 GLY117 TYR118 PRO119 TYR120 VAL121 THR122 LEU123 GLY124 ILE125 LYS126 LYS127 LYS128 ASP129 LEU130 ILE131 ASN132 ASN133 LYS134 THR135 LYS136 ASP137 ILE138 SER139 LYS140 LEU141 LYS142 LEU143 ALA144 LEU145 ASP146 LYS147 TYR148 ASP149 VAL150 ASP151 LEU152 PRO153 MSE154 ILE155 THR156 PHE157 LEU158 LYS159 ASP160 GLU161 LEU162 ARG163 LYS164 LYS165 ASP166 LYS167 ILE168 ALA169 ALA170 GLY171 LYS172 THR173 ARG174 VAL175 ILE176 GLU177 ALA178 SER179 SER180 ILE181 ASN182 ASP183 THR184 ILE185 LEU186 PHE187 ARG188 THR189 VAL190 TYR191 GLY192 ASN193 LEU194 PHE195 SER196 LYS197 PHE198 HIS199 LEU200 ASN201 PRO202 GLY203 VAL204 VAL205 THR206 GLY207 CYS208 ALA209 VAL210 GLY211 CYS212 ASP213 PRO214 GLU215 THR216 PHE217 TRP218 SER219 LYS220 ILE221 PRO222 LEU223 MSE224 LEU225 ASP226 GLY227 ASP228 CYS229 ILE230 MSE231 ALA232 PHE233 ASP234 TYR235 THR236 ASN237 TYR238 ASP239 GLY240 SER241 ILE242 HIS243 PRO244 ILE245 TRP246 PHE247 LYS248 ALA249 LEU250 GLY251 MSE252 VAL253 LEU254 ASP255 ASN256 LEU257 SER258 PHE259 ASN260 PRO261 THR262 LEU263 ILE264 ASN265 ARG266 LEU267 CYS268 ASN269 SER270 LYS271 HIS272 ILE273 PHE274 LYS275 SER276 THR277 TYR278 TYR279 GLU280 VAL281 GLU282 GLY283 GLY284 VAL285 PRO286 SER287 GLY288 CYS289 SER290 GLY291 THR292 SER293 ILE294 PHE295 ASN296 SER297 MSE298 ILE299 ASN300 ASN301 ILE302 ILE303 ILE304 ARG305 THR306 LEU307 VAL308 LEU309 ASP310 ALA311 TYR312 LYS313 HIS314 ILE315 ASP316 LEU317 ASP318 LYS319 LEU320 LYS321 ILE322 ILE323 ALA324 TYR325 GLY326 ASP327 ASP328 VAL329 ILE330 PHE331 SER332 TYR333 LYS334 TYR335 LYS336 LEU337 ASP338 MSE339 GLU340 ALA341 ILE342 ALA343 LYS344 GLU345 GLY346 GLN347 LYS348 TYR349 GLY350 LEU351 THR352 ILE353 THR354 PRO355 ALA356 ASP357 LYS358 SER359 SER360 GLU361 PHE362 LYS363 GLU364 LEU365 ASP366 TYR367 GLY368 ASN369 VAL370 THR371 PHE372 LEU373 LYS374 ARG375 GLY376 PHE377 ARG378 GLN379 ASP380 ASP381 LYS382 TYR383 LYS384 PHE385 LEU386 ILE387 HIS388 PRO389 THR390 PHE391 PRO392 VAL393 GLU394 GLU395 ILE396 TYR397 GLU398 SER399 ILE400 ARG401 TRP402 THR403 LYS404 LYS405 PRO406 SER407 GLN408 MSE409 GLN410 GLU411 HIS412 VAL413 LEU414 SER415 LEU416 CYS417 HIS418 LEU419 MSE420 TRP421 HIS422 ASN423 GLY424 PRO425 GLU426 ILE427 TYR428 LYS429 ASP430 PHE431 GLU432 THR433 LYS434 ILE435 ARG436 SER437 VAL438 SER439 ALA440 GLY441 ARG442 ALA443 LEU444 TYR445 ILE446 PRO447 PRO448 TYR449 GLU450 LEU451 LEU452 ARG453 HIS454 GLU455 TRP456 TYR457 GLU458 LYS459 PHE460
Unit 4 GLY1 GLN2 ILE3 GLN4 ILE5 SER6 LYS7 HIS8 VAL9 LYS10 ASP11 VAL12 GLY13 LEU14 PRO15 SER16 ILE17 HIS18 THR19 PRO20 THR21 LYS22 THR23 LYS24 LEU25 GLN26 PRO27 SER28 VAL29 PHE30 TYR31 ASP32 ILE33 PHE34 PRO35 GLY36 SER37 LYS38 GLU39 PRO40 ALA41 VAL42 LEU43 THR44 GLU45 LYS46 ASP47 PRO48 ARG49 LEU50 LYS51 VAL52 ASP53 PHE54 ASP55 SER56 ALA57 LEU58 PHE59 SER60 LYS61 TYR62 LYS63 GLY64 ASN65 THR66 GLU67 CYS68 SER69 LEU70 ASN71 GLU72 HIS73 ILE74 GLN75 VAL76 ALA77 VAL78 ALA79 HIS80 TYR81 SER82 ALA83 GLN84 LEU85 ALA86 THR87 LEU88 ASP89 ILE90 ASP91 PRO92 GLN93 PRO94 ILE95 ALA96 MSE97 GLU98 ASP99 SER100 VAL101 PHE102 GLY103 MSE104 ASP105 GLY106 LEU107 GLU108 ALA109 LEU110 ASP111 LEU112 ASN113 THR114 SER115 ALA116 GLY117 TYR118 PRO119 TYR120 VAL121 THR122 LEU123 GLY124 ILE125 LYS126 LYS127 LYS128 ASP129 LEU130 ILE131 ASN132 ASN133 LYS134 THR135 LYS136 ASP137 ILE138 SER139 LYS140 LEU141 LYS142 LEU143 ALA144 LEU145 ASP146 LYS147 TYR148 ASP149 VAL150 ASP151 LEU152 PRO153 MSE154 ILE155 THR156 PHE157 LEU158 LYS159 ASP160 GLU161 LEU162 ARG163 LYS164 LYS165 ASP166 LYS167 ILE168 ALA169 ALA170 GLY171 LYS172 THR173 ARG174 VAL175 ILE176 GLU177 ALA178 SER179 SER180 ILE181 ASN182 ASP183 THR184 ILE185 LEU186 PHE187 ARG188 THR189 VAL190 TYR191 GLY192 ASN193 LEU194 PHE195 SER196 LYS197 PHE198 HIS199 LEU200 ASN201 PRO202 GLY203 VAL204 VAL205 THR206 GLY207 CYS208 ALA209 VAL210 GLY211 CYS212 ASP213 PRO214 GLU215 THR216 PHE217 TRP218 SER219 LYS220 ILE221 PRO222 LEU223 MSE224 LEU225 ASP226 GLY227 ASP228 CYS229 ILE230 MSE231 ALA232 PHE233 ASP234 TYR235 THR236 ASN237 TYR238 ASP239 GLY240 SER241 ILE242 HIS243 PRO244 ILE245 TRP246 PHE247 LYS248 ALA249 LEU250 GLY251 MSE252 VAL253 LEU254 ASP255 ASN256 LEU257 SER258 PHE259 ASN260 PRO261 THR262 LEU263 ILE264 ASN265 ARG266 LEU267 CYS268 ASN269 SER270 LYS271 HIS272 ILE273 PHE274 LYS275 SER276 THR277 TYR278 TYR279 GLU280 VAL281 GLU282 GLY283 GLY284 VAL285 PRO286 SER287 GLY288 CYS289 SER290 GLY291 THR292 SER293 ILE294 PHE295 ASN296 SER297 MSE298 ILE299 ASN300 ASN301 ILE302 ILE303 ILE304 ARG305 THR306 LEU307 VAL308 LEU309 ASP310 ALA311 TYR312 LYS313 HIS314 ILE315 ASP316 LEU317 ASP318 LYS319 LEU320 LYS321 ILE322 ILE323 ALA324 TYR325 GLY326 ASP327 ASP328 VAL329 ILE330 PHE331 SER332 TYR333 LYS334 TYR335 LYS336 LEU337 ASP338 MSE339 GLU340 ALA341 ILE342 ALA343 LYS344 GLU345 GLY346 GLN347 LYS348 TYR349 GLY350 LEU351 THR352 ILE353 THR354 PRO355 ALA356 ASP357 LYS358 SER359 SER360 GLU361 PHE362 LYS363 GLU364 LEU365 ASP366 TYR367 GLY368 ASN369 VAL370 THR371 PHE372 LEU373 LYS374 ARG375 GLY376 PHE377 ARG378 GLN379 ASP380 ASP381 LYS382 TYR383 LYS384 PHE385 LEU386 ILE387 HIS388 PRO389 THR390 PHE391 PRO392 VAL393 GLU394 GLU395 ILE396 TYR397 GLU398 SER399 ILE400 ARG401 TRP402 THR403 LYS404 LYS405 PRO406 SER407 GLN408 MSE409 GLN410 GLU411 HIS412 VAL413 LEU414 SER415 LEU416 CYS417 HIS418 LEU419 MSE420 TRP421 HIS422 ASN423 GLY424 PRO425 GLU426 ILE427 TYR428 LYS429 ASP430 PHE431 GLU432 THR433 LYS434 ILE435 ARG436 SER437 VAL438 SER439 ALA440 GLY441 ARG442 ALA443 LEU444 TYR445 ILE446 PRO447 PRO448 TYR449 GLU450 LEU451 LEU452 ARG453 HIS454 GLU455 TRP456 TYR457 GLU458 LYS459 PHE460
Ligands
Unit 5 SO4470 DMX500
Unit 6 SO4471
Unit 7 SO4472
Unit 8 SO4473
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany