Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title IRON-OXO CLUSTERS BIOMINERALIZING ON PROTEIN SURFACES. STRUC ANALYSIS OF H.SALINARUM DPSA IN ITS LOW AND HIGH IRON STATE
Keywords DPSA, FERRITIN, IRON CLUSTER, HIGH IRON, METAL BINDING PROTE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1TKP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IRON-RICH DPSA-HOMOLOG PROTEIN  A 180 1394 0
2  Protein   IRON-RICH DPSA-HOMOLOG PROTEIN  B 175 1355 0
3  Protein   IRON-RICH DPSA-HOMOLOG PROTEIN  C 175 1355 0
4  Protein   IRON-RICH DPSA-HOMOLOG PROTEIN  D 175 1355 0
5  Ligand   IRON-RICH DPSA-HOMOLOG PROTEIN  A 13 0 17
6  Ligand   IRON-RICH DPSA-HOMOLOG PROTEIN  B 10 0 14
7  Ligand   IRON-RICH DPSA-HOMOLOG PROTEIN  C 3 0 3
8  Ligand   IRON-RICH DPSA-HOMOLOG PROTEIN  D 8 0 8
9 Water     227 0 227
total       966 5459 269

Proteins
Unit 1 SER2 THR3 GLN4 LYS5 ASN6 ALA7 ARG8 ALA9 THR10 ALA11 GLY12 GLU13 VAL14 GLU15 GLY16 SER17 ASP18 ALA19 LEU20 ARG21 MET22 ASP23 ALA24 ASP25 ARG26 ALA27 GLU28 GLN29 CYS30 VAL31 ASP32 ALA33 LEU34 ASN35 ALA36 ASP37 LEU38 ALA39 ASN40 VAL41 TYR42 VAL43 LEU44 TYR45 HIS46 GLN47 LEU48 LYS49 LYS50 HIS51 HIS52 TRP53 ASN54 VAL55 GLU56 GLY57 ALA58 GLU59 PHE60 ARG61 ASP62 LEU63 HIS64 LEU65 PHE66 LEU67 GLY68 GLU69 ALA70 ALA71 GLU72 THR73 ALA74 GLU75 GLU76 VAL77 ALA78 ASP79 GLU80 LEU81 ALA82 GLU83 ARG84 VAL85 GLN86 ALA87 LEU88 GLY89 GLY90 VAL91 PRO92 HIS93 ALA94 SER95 PRO96 GLU97 THR98 LEU99 GLN100 ALA101 GLU102 ALA103 SER104 VAL105 ASP106 VAL107 GLU108 ASP109 GLU110 ASP111 VAL112 TYR113 ASP114 ILE115 ARG116 THR117 SER118 LEU119 ALA120 ASN121 ASP122 MET123 ALA124 ILE125 TYR126 GLY127 ASP128 ILE129 ILE130 GLU131 ALA132 THR133 ARG134 GLU135 HIS136 THR137 GLU138 LEU139 ALA140 GLU141 ASN142 LEU143 GLY144 ASP145 HIS146 ALA147 THR148 ALA149 HIS150 MET151 LEU152 ARG153 GLU154 GLY155 LEU156 ILE157 GLU158 LEU159 GLU160 ASP161 ASP162 ALA163 HIS164 HIS165 ILE166 GLU167 HIS168 TYR169 LEU170 GLU171 ASP172 ASP173 THR174 LEU175 VAL176 THR177 GLN178 GLY179 ALA180 LEU181
Unit 2 ALA7 ARG8 ALA9 THR10 ALA11 GLY12 GLU13 VAL14 GLU15 GLY16 SER17 ASP18 ALA19 LEU20 ARG21 MET22 ASP23 ALA24 ASP25 ARG26 ALA27 GLU28 GLN29 CYS30 VAL31 ASP32 ALA33 LEU34 ASN35 ALA36 ASP37 LEU38 ALA39 ASN40 VAL41 TYR42 VAL43 LEU44 TYR45 HIS46 GLN47 LEU48 LYS49 LYS50 HIS51 HIS52 TRP53 ASN54 VAL55 GLU56 GLY57 ALA58 GLU59 PHE60 ARG61 ASP62 LEU63 HIS64 LEU65 PHE66 LEU67 GLY68 GLU69 ALA70 ALA71 GLU72 THR73 ALA74 GLU75 GLU76 VAL77 ALA78 ASP79 GLU80 LEU81 ALA82 GLU83 ARG84 VAL85 GLN86 ALA87 LEU88 GLY89 GLY90 VAL91 PRO92 HIS93 ALA94 SER95 PRO96 GLU97 THR98 LEU99 GLN100 ALA101 GLU102 ALA103 SER104 VAL105 ASP106 VAL107 GLU108 ASP109 GLU110 ASP111 VAL112 TYR113 ASP114 ILE115 ARG116 THR117 SER118 LEU119 ALA120 ASN121 ASP122 MET123 ALA124 ILE125 TYR126 GLY127 ASP128 ILE129 ILE130 GLU131 ALA132 THR133 ARG134 GLU135 HIS136 THR137 GLU138 LEU139 ALA140 GLU141 ASN142 LEU143 GLY144 ASP145 HIS146 ALA147 THR148 ALA149 HIS150 MET151 LEU152 ARG153 GLU154 GLY155 LEU156 ILE157 GLU158 LEU159 GLU160 ASP161 ASP162 ALA163 HIS164 HIS165 ILE166 GLU167 HIS168 TYR169 LEU170 GLU171 ASP172 ASP173 THR174 LEU175 VAL176 THR177 GLN178 GLY179 ALA180 LEU181
Unit 3 ALA7 ARG8 ALA9 THR10 ALA11 GLY12 GLU13 VAL14 GLU15 GLY16 SER17 ASP18 ALA19 LEU20 ARG21 MET22 ASP23 ALA24 ASP25 ARG26 ALA27 GLU28 GLN29 CYS30 VAL31 ASP32 ALA33 LEU34 ASN35 ALA36 ASP37 LEU38 ALA39 ASN40 VAL41 TYR42 VAL43 LEU44 TYR45 HIS46 GLN47 LEU48 LYS49 LYS50 HIS51 HIS52 TRP53 ASN54 VAL55 GLU56 GLY57 ALA58 GLU59 PHE60 ARG61 ASP62 LEU63 HIS64 LEU65 PHE66 LEU67 GLY68 GLU69 ALA70 ALA71 GLU72 THR73 ALA74 GLU75 GLU76 VAL77 ALA78 ASP79 GLU80 LEU81 ALA82 GLU83 ARG84 VAL85 GLN86 ALA87 LEU88 GLY89 GLY90 VAL91 PRO92 HIS93 ALA94 SER95 PRO96 GLU97 THR98 LEU99 GLN100 ALA101 GLU102 ALA103 SER104 VAL105 ASP106 VAL107 GLU108 ASP109 GLU110 ASP111 VAL112 TYR113 ASP114 ILE115 ARG116 THR117 SER118 LEU119 ALA120 ASN121 ASP122 MET123 ALA124 ILE125 TYR126 GLY127 ASP128 ILE129 ILE130 GLU131 ALA132 THR133 ARG134 GLU135 HIS136 THR137 GLU138 LEU139 ALA140 GLU141 ASN142 LEU143 GLY144 ASP145 HIS146 ALA147 THR148 ALA149 HIS150 MET151 LEU152 ARG153 GLU154 GLY155 LEU156 ILE157 GLU158 LEU159 GLU160 ASP161 ASP162 ALA163 HIS164 HIS165 ILE166 GLU167 HIS168 TYR169 LEU170 GLU171 ASP172 ASP173 THR174 LEU175 VAL176 THR177 GLN178 GLY179 ALA180 LEU181
Unit 4 ALA7 ARG8 ALA9 THR10 ALA11 GLY12 GLU13 VAL14 GLU15 GLY16 SER17 ASP18 ALA19 LEU20 ARG21 MET22 ASP23 ALA24 ASP25 ARG26 ALA27 GLU28 GLN29 CYS30 VAL31 ASP32 ALA33 LEU34 ASN35 ALA36 ASP37 LEU38 ALA39 ASN40 VAL41 TYR42 VAL43 LEU44 TYR45 HIS46 GLN47 LEU48 LYS49 LYS50 HIS51 HIS52 TRP53 ASN54 VAL55 GLU56 GLY57 ALA58 GLU59 PHE60 ARG61 ASP62 LEU63 HIS64 LEU65 PHE66 LEU67 GLY68 GLU69 ALA70 ALA71 GLU72 THR73 ALA74 GLU75 GLU76 VAL77 ALA78 ASP79 GLU80 LEU81 ALA82 GLU83 ARG84 VAL85 GLN86 ALA87 LEU88 GLY89 GLY90 VAL91 PRO92 HIS93 ALA94 SER95 PRO96 GLU97 THR98 LEU99 GLN100 ALA101 GLU102 ALA103 SER104 VAL105 ASP106 VAL107 GLU108 ASP109 GLU110 ASP111 VAL112 TYR113 ASP114 ILE115 ARG116 THR117 SER118 LEU119 ALA120 ASN121 ASP122 MET123 ALA124 ILE125 TYR126 GLY127 ASP128 ILE129 ILE130 GLU131 ALA132 THR133 ARG134 GLU135 HIS136 THR137 GLU138 LEU139 ALA140 GLU141 ASN142 LEU143 GLY144 ASP145 HIS146 ALA147 THR148 ALA149 HIS150 MET151 LEU152 ARG153 GLU154 GLY155 LEU156 ILE157 GLU158 LEU159 GLU160 ASP161 ASP162 ALA163 HIS164 HIS165 ILE166 GLU167 HIS168 TYR169 LEU170 GLU171 ASP172 ASP173 THR174 LEU175 VAL176 THR177 GLN178 GLY179 ALA180 LEU181

Ligands
Unit 5 FE304 FE307 FE308 FE310 FE313 FE315 FE316 FE321 FE324 FE328 FE330 SO4401 NA501
Unit 6 FE303 FE305 FE317 FE318 FE320 FE322 FE326 FE327 FE329 SO4402
Unit 7 FE306 FE311 NA502
Unit 8 FE301 FE302 FE309 FE312 FE314 FE319 FE323 FE325

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany