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Sequence, Chains, Asymmetric and Biological Units

Title X-RAY CRYSTAL STRUCTURE OF AIF-2B ALPHA SUBUNIT-RELATED TRANSLATION INITIATION FACTOR [THERMOTOGA MARITIMA]
Keywords STRUCTURAL GENOMICS, TRANSLATION INITIATION FACTOR, AIF-2B SUBUNIT, PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, ISOMERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1T9K     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  A 340 2586 64
2  Protein   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  B 340 2586 64
3  Protein   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  C 342 2595 72
4  Protein   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  D 342 2595 72
5  Ligand   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  A 2 0 6
6  Ligand   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  B 2 0 6
7  Ligand   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  C 1 0 5
8  Ligand   PROBABLE METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE  D 1 0 5
9 Water     198 0 198
total       1568 10362 492

Proteins
Unit 1 LEU3 LYS4 THR5 LYS6 THR7 MSE8 GLU9 TRP10 SER11 GLY12 ASN13 SER14 LEU15 LYS16 LEU17 LEU18 ASP19 GLN20 ARG21 LYS22 LEU23 PRO24 PHE25 ILE26 GLU27 GLU28 TYR29 VAL30 GLU31 CYS32 LYS33 THR34 HIS35 GLU36 GLU37 VAL38 ALA39 HIS40 ALA41 ILE42 LYS43 GLU44 MSE45 ILE46 VAL47 ARG48 GLY49 ALA50 PRO51 ALA52 ILE53 GLY54 VAL55 ALA56 ALA57 ALA58 PHE59 GLY60 TYR61 VAL62 LEU63 GLY64 LEU65 ARG66 ASP67 TYR68 LYS69 THR70 GLY71 SER72 LEU73 THR74 ASP75 TRP76 MSE77 LYS78 GLN79 VAL80 LYS81 GLU82 THR83 LEU84 ALA85 ARG86 THR87 ARG88 PRO89 THR90 ALA91 VAL92 ASN93 LEU94 PHE95 TRP96 ALA97 LEU98 ASN99 ARG100 MSE101 GLU102 LYS103 VAL104 PHE105 PHE106 GLU107 ASN108 ALA109 ASP110 ARG111 GLU112 ASN113 LEU114 PHE115 GLU116 ILE117 LEU118 GLU119 ASN120 GLU121 ALA122 LEU123 LYS124 MSE125 ALA126 TYR127 GLU128 ASP129 ILE130 GLU131 VAL132 ASN133 LYS134 ALA135 ILE136 GLY137 LYS138 ASN139 GLY140 ALA141 GLN142 LEU143 ILE144 LYS145 ASP146 GLY147 SER148 THR149 ILE150 LEU151 THR152 HIS153 CYS154 ASN155 ALA156 GLY157 ALA158 LEU159 ALA160 THR161 VAL162 ASP163 TYR164 GLY165 THR166 ALA167 LEU168 GLY169 VAL170 ILE171 ARG172 ALA173 ALA174 VAL175 GLU176 SER177 GLY178 LYS179 ARG180 ILE181 ARG182 VAL183 PHE184 ALA185 ASP186 GLU187 THR188 ARG189 PRO190 TYR191 LEU192 GLN193 GLY194 ALA195 ARG196 LEU197 THR198 ALA199 TRP200 GLU201 LEU202 MSE203 LYS204 ASP205 GLY206 ILE207 GLU208 VAL209 TYR210 VAL211 ILE212 THR213 ASP214 ASN215 MSE216 ALA217 GLY218 TRP219 LEU220 MSE221 LYS222 ARG223 GLY224 LEU225 ILE226 ASP227 ALA228 VAL229 VAL230 VAL231 GLY232 ALA233 ASP234 ARG235 ILE236 ALA237 LEU238 ASN239 GLY240 ASP241 THR242 ALA243 ASN244 LYS245 ILE246 GLY247 THR248 TYR249 SER250 LEU251 ALA252 VAL253 LEU254 ALA255 LYS256 ARG257 ASN258 ASN259 ILE260 PRO261 PHE262 TYR263 VAL264 ALA265 ALA266 PRO267 VAL268 SER269 THR270 ILE271 ASP272 PRO273 THR274 ILE275 ARG276 SER277 GLY278 GLU279 GLU280 ILE281 PRO282 ILE283 GLU284 GLU285 ARG286 ARG287 PRO288 GLU289 GLU290 VAL291 THR292 HIS293 CYS294 GLY295 GLY296 ASN297 ARG298 ILE299 ALA300 PRO301 GLU302 GLY303 VAL304 LYS305 VAL306 LEU307 ASN308 PRO309 ALA310 PHE311 ASP312 VAL313 THR314 GLU315 ASN316 THR317 LEU318 ILE319 THR320 ALA321 ILE322 ILE323 THR324 GLU325 LYS326 GLY327 VAL328 ILE329 ARG330 PRO331 PRO332 PHE333 GLU334 GLU335 ASN336 ILE337 LYS338 LYS339 ILE340 LEU341 GLU342
Unit 2 LEU3 LYS4 THR5 LYS6 THR7 MSE8 GLU9 TRP10 SER11 GLY12 ASN13 SER14 LEU15 LYS16 LEU17 LEU18 ASP19 GLN20 ARG21 LYS22 LEU23 PRO24 PHE25 ILE26 GLU27 GLU28 TYR29 VAL30 GLU31 CYS32 LYS33 THR34 HIS35 GLU36 GLU37 VAL38 ALA39 HIS40 ALA41 ILE42 LYS43 GLU44 MSE45 ILE46 VAL47 ARG48 GLY49 ALA50 PRO51 ALA52 ILE53 GLY54 VAL55 ALA56 ALA57 ALA58 PHE59 GLY60 TYR61 VAL62 LEU63 GLY64 LEU65 ARG66 ASP67 TYR68 LYS69 THR70 GLY71 SER72 LEU73 THR74 ASP75 TRP76 MSE77 LYS78 GLN79 VAL80 LYS81 GLU82 THR83 LEU84 ALA85 ARG86 THR87 ARG88 PRO89 THR90 ALA91 VAL92 ASN93 LEU94 PHE95 TRP96 ALA97 LEU98 ASN99 ARG100 MSE101 GLU102 LYS103 VAL104 PHE105 PHE106 GLU107 ASN108 ALA109 ASP110 ARG111 GLU112 ASN113 LEU114 PHE115 GLU116 ILE117 LEU118 GLU119 ASN120 GLU121 ALA122 LEU123 LYS124 MSE125 ALA126 TYR127 GLU128 ASP129 ILE130 GLU131 VAL132 ASN133 LYS134 ALA135 ILE136 GLY137 LYS138 ASN139 GLY140 ALA141 GLN142 LEU143 ILE144 LYS145 ASP146 GLY147 SER148 THR149 ILE150 LEU151 THR152 HIS153 CYS154 ASN155 ALA156 GLY157 ALA158 LEU159 ALA160 THR161 VAL162 ASP163 TYR164 GLY165 THR166 ALA167 LEU168 GLY169 VAL170 ILE171 ARG172 ALA173 ALA174 VAL175 GLU176 SER177 GLY178 LYS179 ARG180 ILE181 ARG182 VAL183 PHE184 ALA185 ASP186 GLU187 THR188 ARG189 PRO190 TYR191 LEU192 GLN193 GLY194 ALA195 ARG196 LEU197 THR198 ALA199 TRP200 GLU201 LEU202 MSE203 LYS204 ASP205 GLY206 ILE207 GLU208 VAL209 TYR210 VAL211 ILE212 THR213 ASP214 ASN215 MSE216 ALA217 GLY218 TRP219 LEU220 MSE221 LYS222 ARG223 GLY224 LEU225 ILE226 ASP227 ALA228 VAL229 VAL230 VAL231 GLY232 ALA233 ASP234 ARG235 ILE236 ALA237 LEU238 ASN239 GLY240 ASP241 THR242 ALA243 ASN244 LYS245 ILE246 GLY247 THR248 TYR249 SER250 LEU251 ALA252 VAL253 LEU254 ALA255 LYS256 ARG257 ASN258 ASN259 ILE260 PRO261 PHE262 TYR263 VAL264 ALA265 ALA266 PRO267 VAL268 SER269 THR270 ILE271 ASP272 PRO273 THR274 ILE275 ARG276 SER277 GLY278 GLU279 GLU280 ILE281 PRO282 ILE283 GLU284 GLU285 ARG286 ARG287 PRO288 GLU289 GLU290 VAL291 THR292 HIS293 CYS294 GLY295 GLY296 ASN297 ARG298 ILE299 ALA300 PRO301 GLU302 GLY303 VAL304 LYS305 VAL306 LEU307 ASN308 PRO309 ALA310 PHE311 ASP312 VAL313 THR314 GLU315 ASN316 THR317 LEU318 ILE319 THR320 ALA321 ILE322 ILE323 THR324 GLU325 LYS326 GLY327 VAL328 ILE329 ARG330 PRO331 PRO332 PHE333 GLU334 GLU335 ASN336 ILE337 LYS338 LYS339 ILE340 LEU341 GLU342
Unit 3 MSE1 LYS2 LEU3 LYS4 THR5 LYS6 THR7 MSE8 GLU9 TRP10 SER11 GLY12 ASN13 SER14 LEU15 LYS16 LEU17 LEU18 ASP19 GLN20 ARG21 LYS22 LEU23 PRO24 PHE25 ILE26 GLU27 GLU28 TYR29 VAL30 GLU31 CYS32 LYS33 THR34 HIS35 GLU36 GLU37 VAL38 ALA39 HIS40 ALA41 ILE42 LYS43 GLU44 MSE45 ILE46 VAL47 ARG48 GLY49 ALA50 PRO51 ALA52 ILE53 GLY54 VAL55 ALA56 ALA57 ALA58 PHE59 GLY60 TYR61 VAL62 LEU63 GLY64 LEU65 ARG66 ASP67 TYR68 LYS69 THR70 GLY71 SER72 LEU73 THR74 ASP75 TRP76 MSE77 LYS78 GLN79 VAL80 LYS81 GLU82 THR83 LEU84 ALA85 ARG86 THR87 ARG88 PRO89 THR90 ALA91 VAL92 ASN93 LEU94 PHE95 TRP96 ALA97 LEU98 ASN99 ARG100 MSE101 GLU102 LYS103 VAL104 PHE105 PHE106 GLU107 ASN108 ALA109 ASP110 ARG111 GLU112 ASN113 LEU114 PHE115 GLU116 ILE117 LEU118 GLU119 ASN120 GLU121 ALA122 LEU123 LYS124 MSE125 ALA126 TYR127 GLU128 ASP129 ILE130 GLU131 VAL132 ASN133 LYS134 ALA135 ILE136 GLY137 LYS138 ASN139 GLY140 ALA141 GLN142 LEU143 ILE144 LYS145 ASP146 GLY147 SER148 THR149 ILE150 LEU151 THR152 HIS153 CYS154 ASN155 ALA156 GLY157 ALA158 LEU159 ALA160 THR161 VAL162 ASP163 TYR164 GLY165 THR166 ALA167 LEU168 GLY169 VAL170 ILE171 ARG172 ALA173 ALA174 VAL175 GLU176 SER177 GLY178 LYS179 ARG180 ILE181 ARG182 VAL183 PHE184 ALA185 ASP186 GLU187 THR188 ARG189 PRO190 TYR191 LEU192 GLN193 GLY194 ALA195 ARG196 LEU197 THR198 ALA199 TRP200 GLU201 LEU202 MSE203 LYS204 ASP205 GLY206 ILE207 GLU208 VAL209 TYR210 VAL211 ILE212 THR213 ASP214 ASN215 MSE216 ALA217 GLY218 TRP219 LEU220 MSE221 LYS222 ARG223 GLY224 LEU225 ILE226 ASP227 ALA228 VAL229 VAL230 VAL231 GLY232 ALA233 ASP234 ARG235 ILE236 ALA237 LEU238 ASN239 GLY240 ASP241 THR242 ALA243 ASN244 LYS245 ILE246 GLY247 THR248 TYR249 SER250 LEU251 ALA252 VAL253 LEU254 ALA255 LYS256 ARG257 ASN258 ASN259 ILE260 PRO261 PHE262 TYR263 VAL264 ALA265 ALA266 PRO267 VAL268 SER269 THR270 ILE271 ASP272 PRO273 THR274 ILE275 ARG276 SER277 GLY278 GLU279 GLU280 ILE281 PRO282 ILE283 GLU284 GLU285 ARG286 ARG287 PRO288 GLU289 GLU290 VAL291 THR292 HIS293 CYS294 GLY295 GLY296 ASN297 ARG298 ILE299 ALA300 PRO301 GLU302 GLY303 VAL304 LYS305 VAL306 LEU307 ASN308 PRO309 ALA310 PHE311 ASP312 VAL313 THR314 GLU315 ASN316 THR317 LEU318 ILE319 THR320 ALA321 ILE322 ILE323 THR324 GLU325 LYS326 GLY327 VAL328 ILE329 ARG330 PRO331 PRO332 PHE333 GLU334 GLU335 ASN336 ILE337 LYS338 LYS339 ILE340 LEU341 GLU342
Unit 4 MSE1 LYS2 LEU3 LYS4 THR5 LYS6 THR7 MSE8 GLU9 TRP10 SER11 GLY12 ASN13 SER14 LEU15 LYS16 LEU17 LEU18 ASP19 GLN20 ARG21 LYS22 LEU23 PRO24 PHE25 ILE26 GLU27 GLU28 TYR29 VAL30 GLU31 CYS32 LYS33 THR34 HIS35 GLU36 GLU37 VAL38 ALA39 HIS40 ALA41 ILE42 LYS43 GLU44 MSE45 ILE46 VAL47 ARG48 GLY49 ALA50 PRO51 ALA52 ILE53 GLY54 VAL55 ALA56 ALA57 ALA58 PHE59 GLY60 TYR61 VAL62 LEU63 GLY64 LEU65 ARG66 ASP67 TYR68 LYS69 THR70 GLY71 SER72 LEU73 THR74 ASP75 TRP76 MSE77 LYS78 GLN79 VAL80 LYS81 GLU82 THR83 LEU84 ALA85 ARG86 THR87 ARG88 PRO89 THR90 ALA91 VAL92 ASN93 LEU94 PHE95 TRP96 ALA97 LEU98 ASN99 ARG100 MSE101 GLU102 LYS103 VAL104 PHE105 PHE106 GLU107 ASN108 ALA109 ASP110 ARG111 GLU112 ASN113 LEU114 PHE115 GLU116 ILE117 LEU118 GLU119 ASN120 GLU121 ALA122 LEU123 LYS124 MSE125 ALA126 TYR127 GLU128 ASP129 ILE130 GLU131 VAL132 ASN133 LYS134 ALA135 ILE136 GLY137 LYS138 ASN139 GLY140 ALA141 GLN142 LEU143 ILE144 LYS145 ASP146 GLY147 SER148 THR149 ILE150 LEU151 THR152 HIS153 CYS154 ASN155 ALA156 GLY157 ALA158 LEU159 ALA160 THR161 VAL162 ASP163 TYR164 GLY165 THR166 ALA167 LEU168 GLY169 VAL170 ILE171 ARG172 ALA173 ALA174 VAL175 GLU176 SER177 GLY178 LYS179 ARG180 ILE181 ARG182 VAL183 PHE184 ALA185 ASP186 GLU187 THR188 ARG189 PRO190 TYR191 LEU192 GLN193 GLY194 ALA195 ARG196 LEU197 THR198 ALA199 TRP200 GLU201 LEU202 MSE203 LYS204 ASP205 GLY206 ILE207 GLU208 VAL209 TYR210 VAL211 ILE212 THR213 ASP214 ASN215 MSE216 ALA217 GLY218 TRP219 LEU220 MSE221 LYS222 ARG223 GLY224 LEU225 ILE226 ASP227 ALA228 VAL229 VAL230 VAL231 GLY232 ALA233 ASP234 ARG235 ILE236 ALA237 LEU238 ASN239 GLY240 ASP241 THR242 ALA243 ASN244 LYS245 ILE246 GLY247 THR248 TYR249 SER250 LEU251 ALA252 VAL253 LEU254 ALA255 LYS256 ARG257 ASN258 ASN259 ILE260 PRO261 PHE262 TYR263 VAL264 ALA265 ALA266 PRO267 VAL268 SER269 THR270 ILE271 ASP272 PRO273 THR274 ILE275 ARG276 SER277 GLY278 GLU279 GLU280 ILE281 PRO282 ILE283 GLU284 GLU285 ARG286 ARG287 PRO288 GLU289 GLU290 VAL291 THR292 HIS293 CYS294 GLY295 GLY296 ASN297 ARG298 ILE299 ALA300 PRO301 GLU302 GLY303 VAL304 LYS305 VAL306 LEU307 ASN308 PRO309 ALA310 PHE311 ASP312 VAL313 THR314 GLU315 ASN316 THR317 LEU318 ILE319 THR320 ALA321 ILE322 ILE323 THR324 GLU325 LYS326 GLY327 VAL328 ILE329 ARG330 PRO331 PRO332 PHE333 GLU334 GLU335 ASN336 ILE337 LYS338 LYS339 ILE340 LEU341 GLU342

Ligands
Unit 5 SO4401 CL416
Unit 6 CL406 SO4411
Unit 7 SO4403
Unit 8 SO4413

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany