Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF COLLAGEN IV NC1 DOMAIN FROM PLACENTA BA MEMBRANE
Keywords BASEMENT MEMBRANE, TYPE IV COLLAGEN, NC1 DOMAIN, STRUCTURAL
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1T61     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TYPE IV COLLAGEN  A 223 1724 0
2  Protein   TYPE IV COLLAGEN  B 223 1725 0
3  Protein   TYPE IV COLLAGEN  C 222 1720 0
4  Protein   TYPE IV COLLAGEN  D 224 1735 0
5  Protein   TYPE IV COLLAGEN  E 224 1735 0
6  Protein   TYPE IV COLLAGEN  F 222 1720 0
7  Ligand   TYPE IV COLLAGEN  A 7 0 27
8  Ligand   TYPE IV COLLAGEN  B 3 0 8
9  Ligand   TYPE IV COLLAGEN  C 4 0 4
10  Ligand   TYPE IV COLLAGEN  D 2 0 7
11  Ligand   TYPE IV COLLAGEN  E 2 0 7
12  Ligand   TYPE IV COLLAGEN  F 3 0 3
13 Water     673 0 673
total       2032 10359 729
Proteins
Unit 1 GLY5 PHE6 LEU7 VAL8 THR9 ARG10 HIS11 SER12 GLN13 THR14 THR15 ASP16 ASP17 PRO18 GLN19 CYS20 PRO21 PRO22 GLY23 THR24 LYS25 ILE26 LEU27 TYR28 HIS29 GLY30 TYR31 SER32 LEU33 LEU34 TYR35 VAL36 GLN37 GLY38 ASN39 GLU40 ARG41 ALA42 HIS43 GLY44 GLN45 ASP46 LEU47 GLY48 THR49 ALA50 GLY51 SER52 CYS53 LEU54 ARG55 LYS56 PHE57 SER58 THR59 MET60 PRO61 PHE62 LEU63 PHE64 CYS65 ASN66 ILE67 ASN68 ASN69 VAL70 CYS71 ASN72 PHE73 ALA74 SER75 ARG76 ASN77 ASP78 TYR79 SER80 TYR81 TRP82 LEU83 SER84 THR85 PRO86 GLU87 PRO88 MET89 PRO90 MET91 SER92 MET93 ALA94 PRO95 ILE96 THR97 GLY98 GLU99 ASN100 ILE101 ARG102 PRO103 PHE104 ILE105 SER106 ARG107 CYS108 ALA109 VAL110 CYS111 GLU112 ALA113 PRO114 ALA115 MET116 VAL117 MET118 ALA119 VAL120 HIS121 SER122 GLN123 THR124 ILE125 GLN126 ILE127 PRO128 GLN129 CYS130 PRO131 THR132 GLY133 TRP134 SER135 SER136 LEU137 TRP138 ILE139 GLY140 TYR141 SER142 PHE143 VAL144 MET145 HIS146 THR147 SER148 ALA149 GLY150 ALA151 GLU152 GLY153 SER154 GLY155 GLN156 ALA157 LEU158 ALA159 SER160 PRO161 GLY162 SER163 CYS164 LEU165 GLU166 GLU167 PHE168 ARG169 SER170 ALA171 PRO172 PHE173 ILE174 GLU175 CYS176 HIS177 GLY178 ARG179 GLY180 THR181 CYS182 ASN183 TYR184 TYR185 ALA186 ASN187 ALA188 TYR189 SER190 PHE191 TRP192 LEU193 ALA194 THR195 ILE196 GLU197 ARG198 SER199 GLU200 MET201 PHE202 LYS203 LYS204 PRO205 THR206 PRO207 SER208 THR209 LEU210 LYS211 ALA212 GLY213 GLU214 LEU215 ARG216 THR217 HIS218 VAL219 SER220 ARG221 CYS222 GLN223 VAL224 CYS225 MET226 ARG227
Unit 2 PHE6 LEU7 VAL8 THR9 ARG10 HIS11 SER12 GLN13 THR14 THR15 ASP16 ASP17 PRO18 GLN19 CYS20 PRO21 PRO22 GLY23 THR24 LYS25 ILE26 LEU27 TYR28 HIS29 GLY30 TYR31 SER32 LEU33 LEU34 TYR35 VAL36 GLN37 GLY38 ASN39 GLU40 ARG41 ALA42 HIS43 GLY44 GLN45 ASP46 LEU47 GLY48 THR49 ALA50 GLY51 SER52 CYS53 LEU54 ARG55 LYS56 PHE57 SER58 THR59 MET60 PRO61 PHE62 LEU63 PHE64 CYS65 ASN66 ILE67 ASN68 ASN69 VAL70 CYS71 ASN72 PHE73 ALA74 SER75 ARG76 ASN77 ASP78 TYR79 SER80 TYR81 TRP82 LEU83 SER84 THR85 PRO86 GLU87 PRO88 MET89 PRO90 MET91 SER92 MET93 ALA94 PRO95 ILE96 THR97 GLY98 GLU99 ASN100 ILE101 ARG102 PRO103 PHE104 ILE105 SER106 ARG107 CYS108 ALA109 VAL110 CYS111 GLU112 ALA113 PRO114 ALA115 MET116 VAL117 MET118 ALA119 VAL120 HIS121 SER122 GLN123 THR124 ILE125 GLN126 ILE127 PRO128 GLN129 CYS130 PRO131 THR132 GLY133 TRP134 SER135 SER136 LEU137 TRP138 ILE139 GLY140 TYR141 SER142 PHE143 VAL144 MET145 HIS146 THR147 SER148 ALA149 GLY150 ALA151 GLU152 GLY153 SER154 GLY155 GLN156 ALA157 LEU158 ALA159 SER160 PRO161 GLY162 SER163 CYS164 LEU165 GLU166 GLU167 PHE168 ARG169 SER170 ALA171 PRO172 PHE173 ILE174 GLU175 CYS176 HIS177 GLY178 ARG179 GLY180 THR181 CYS182 ASN183 TYR184 TYR185 ALA186 ASN187 ALA188 TYR189 SER190 PHE191 TRP192 LEU193 ALA194 THR195 ILE196 GLU197 ARG198 SER199 GLU200 MET201 PHE202 LYS203 LYS204 PRO205 THR206 PRO207 SER208 THR209 LEU210 LYS211 ALA212 GLY213 GLU214 LEU215 ARG216 THR217 HIS218 VAL219 SER220 ARG221 CYS222 GLN223 VAL224 CYS225 MET226 ARG227 ARG228
Unit 3 TYR5 LEU6 LEU7 VAL8 LYS9 HIS10 SER11 GLN12 THR13 ASP14 GLN15 GLU16 PRO17 MET18 CYS19 PRO20 VAL21 GLY22 MET23 ASN24 LYS25 LEU26 TRP27 SER28 GLY29 TYR30 SER31 LEU32 LEU33 TYR34 PHE35 GLU36 GLY37 GLN38 GLU39 LYS40 ALA41 HIS42 ASN43 GLN44 ASP45 LEU46 GLY47 LEU48 ALA49 GLY50 SER51 CYS52 LEU53 ALA54 ARG55 PHE56 SER57 THR58 MET59 PRO60 PHE61 LEU62 TYR63 CYS64 ASN65 PRO66 GLY67 ASP68 VAL69 CYS70 TYR71 TYR72 ALA73 SER74 ARG75 ASN76 ASP77 LYS78 SER79 TYR80 TRP81 LEU82 SER83 THR84 THR85 ALA86 PRO87 LEU88 PRO89 MET90 MET91 PRO92 VAL93 ALA94 GLU95 GLU96 ASP97 ILE98 ARG99 PRO100 TYR101 ILE102 SER103 ARG104 CYS105 SER106 VAL107 CYS108 GLU109 ALA110 PRO111 ALA112 VAL113 ALA114 ILE115 ALA116 VAL117 HIS118 SER119 GLN120 ASP121 VAL122 SER123 ILE124 PRO125 HIS126 CYS127 PRO128 ALA129 GLY130 TRP131 ARG132 SER133 LEU134 TRP135 ILE136 GLY137 TYR138 SER139 PHE140 LEU141 MET142 HIS143 THR144 ALA145 ALA146 GLY147 ASP148 GLU149 GLY150 GLY151 GLY152 GLN153 SER154 LEU155 VAL156 SER157 PRO158 GLY159 SER160 CYS161 LEU162 GLU163 ASP164 PHE165 ARG166 ALA167 THR168 PRO169 PHE170 ILE171 GLU172 CYS173 ASN174 GLY175 ALA176 ARG177 GLY178 THR179 CYS180 HIS181 TYR182 TYR183 ALA184 ASN185 LYS186 TYR187 SER188 PHE189 TRP190 LEU191 THR192 THR193 ILE194 PRO195 GLU196 GLN197 SER198 PHE199 GLN200 GLY201 THR202 PRO203 SER204 ALA205 ASP206 THR207 LEU208 LYS209 ALA210 GLY211 LEU212 ILE213 ARG214 THR215 HIS216 ILE217 SER218 ARG219 CYS220 GLN221 VAL222 CYS223 MET224 LYS225 ASN226
Unit 4 GLY5 PHE6 LEU7 VAL8 THR9 ARG10 HIS11 SER12 GLN13 THR14 THR15 ASP16 ASP17 PRO18 GLN19 CYS20 PRO21 PRO22 GLY23 THR24 LYS25 ILE26 LEU27 TYR28 HIS29 GLY30 TYR31 SER32 LEU33 LEU34 TYR35 VAL36 GLN37 GLY38 ASN39 GLU40 ARG41 ALA42 HIS43 GLY44 GLN45 ASP46 LEU47 GLY48 THR49 ALA50 GLY51 SER52 CYS53 LEU54 ARG55 LYS56 PHE57 SER58 THR59 MET60 PRO61 PHE62 LEU63 PHE64 CYS65 ASN66 ILE67 ASN68 ASN69 VAL70 CYS71 ASN72 PHE73 ALA74 SER75 ARG76 ASN77 ASP78 TYR79 SER80 TYR81 TRP82 LEU83 SER84 THR85 PRO86 GLU87 PRO88 MET89 PRO90 MET91 SER92 MET93 ALA94 PRO95 ILE96 THR97 GLY98 GLU99 ASN100 ILE101 ARG102 PRO103 PHE104 ILE105 SER106 ARG107 CYS108 ALA109 VAL110 CYS111 GLU112 ALA113 PRO114 ALA115 MET116 VAL117 MET118 ALA119 VAL120 HIS121 SER122 GLN123 THR124 ILE125 GLN126 ILE127 PRO128 GLN129 CYS130 PRO131 THR132 GLY133 TRP134 SER135 SER136 LEU137 TRP138 ILE139 GLY140 TYR141 SER142 PHE143 VAL144 MET145 HIS146 THR147 SER148 ALA149 GLY150 ALA151 GLU152 GLY153 SER154 GLY155 GLN156 ALA157 LEU158 ALA159 SER160 PRO161 GLY162 SER163 CYS164 LEU165 GLU166 GLU167 PHE168 ARG169 SER170 ALA171 PRO172 PHE173 ILE174 GLU175 CYS176 HIS177 GLY178 ARG179 GLY180 THR181 CYS182 ASN183 TYR184 TYR185 ALA186 ASN187 ALA188 TYR189 SER190 PHE191 TRP192 LEU193 ALA194 THR195 ILE196 GLU197 ARG198 SER199 GLU200 MET201 PHE202 LYS203 LYS204 PRO205 THR206 PRO207 SER208 THR209 LEU210 LYS211 ALA212 GLY213 GLU214 LEU215 ARG216 THR217 HIS218 VAL219 SER220 ARG221 CYS222 GLN223 VAL224 CYS225 MET226 ARG227 ARG228
Unit 5 GLY5 PHE6 LEU7 VAL8 THR9 ARG10 HIS11 SER12 GLN13 THR14 THR15 ASP16 ASP17 PRO18 GLN19 CYS20 PRO21 PRO22 GLY23 THR24 LYS25 ILE26 LEU27 TYR28 HIS29 GLY30 TYR31 SER32 LEU33 LEU34 TYR35 VAL36 GLN37 GLY38 ASN39 GLU40 ARG41 ALA42 HIS43 GLY44 GLN45 ASP46 LEU47 GLY48 THR49 ALA50 GLY51 SER52 CYS53 LEU54 ARG55 LYS56 PHE57 SER58 THR59 MET60 PRO61 PHE62 LEU63 PHE64 CYS65 ASN66 ILE67 ASN68 ASN69 VAL70 CYS71 ASN72 PHE73 ALA74 SER75 ARG76 ASN77 ASP78 TYR79 SER80 TYR81 TRP82 LEU83 SER84 THR85 PRO86 GLU87 PRO88 MET89 PRO90 MET91 SER92 MET93 ALA94 PRO95 ILE96 THR97 GLY98 GLU99 ASN100 ILE101 ARG102 PRO103 PHE104 ILE105 SER106 ARG107 CYS108 ALA109 VAL110 CYS111 GLU112 ALA113 PRO114 ALA115 MET116 VAL117 MET118 ALA119 VAL120 HIS121 SER122 GLN123 THR124 ILE125 GLN126 ILE127 PRO128 GLN129 CYS130 PRO131 THR132 GLY133 TRP134 SER135 SER136 LEU137 TRP138 ILE139 GLY140 TYR141 SER142 PHE143 VAL144 MET145 HIS146 THR147 SER148 ALA149 GLY150 ALA151 GLU152 GLY153 SER154 GLY155 GLN156 ALA157 LEU158 ALA159 SER160 PRO161 GLY162 SER163 CYS164 LEU165 GLU166 GLU167 PHE168 ARG169 SER170 ALA171 PRO172 PHE173 ILE174 GLU175 CYS176 HIS177 GLY178 ARG179 GLY180 THR181 CYS182 ASN183 TYR184 TYR185 ALA186 ASN187 ALA188 TYR189 SER190 PHE191 TRP192 LEU193 ALA194 THR195 ILE196 GLU197 ARG198 SER199 GLU200 MET201 PHE202 LYS203 LYS204 PRO205 THR206 PRO207 SER208 THR209 LEU210 LYS211 ALA212 GLY213 GLU214 LEU215 ARG216 THR217 HIS218 VAL219 SER220 ARG221 CYS222 GLN223 VAL224 CYS225 MET226 ARG227 ARG228
Unit 6 TYR5 LEU6 LEU7 VAL8 LYS9 HIS10 SER11 GLN12 THR13 ASP14 GLN15 GLU16 PRO17 MET18 CYS19 PRO20 VAL21 GLY22 MET23 ASN24 LYS25 LEU26 TRP27 SER28 GLY29 TYR30 SER31 LEU32 LEU33 TYR34 PHE35 GLU36 GLY37 GLN38 GLU39 LYS40 ALA41 HIS42 ASN43 GLN44 ASP45 LEU46 GLY47 LEU48 ALA49 GLY50 SER51 CYS52 LEU53 ALA54 ARG55 PHE56 SER57 THR58 MET59 PRO60 PHE61 LEU62 TYR63 CYS64 ASN65 PRO66 GLY67 ASP68 VAL69 CYS70 TYR71 TYR72 ALA73 SER74 ARG75 ASN76 ASP77 LYS78 SER79 TYR80 TRP81 LEU82 SER83 THR84 THR85 ALA86 PRO87 LEU88 PRO89 MET90 MET91 PRO92 VAL93 ALA94 GLU95 GLU96 ASP97 ILE98 ARG99 PRO100 TYR101 ILE102 SER103 ARG104 CYS105 SER106 VAL107 CYS108 GLU109 ALA110 PRO111 ALA112 VAL113 ALA114 ILE115 ALA116 VAL117 HIS118 SER119 GLN120 ASP121 VAL122 SER123 ILE124 PRO125 HIS126 CYS127 PRO128 ALA129 GLY130 TRP131 ARG132 SER133 LEU134 TRP135 ILE136 GLY137 TYR138 SER139 PHE140 LEU141 MET142 HIS143 THR144 ALA145 ALA146 GLY147 ASP148 GLU149 GLY150 GLY151 GLY152 GLN153 SER154 LEU155 VAL156 SER157 PRO158 GLY159 SER160 CYS161 LEU162 GLU163 ASP164 PHE165 ARG166 ALA167 THR168 PRO169 PHE170 ILE171 GLU172 CYS173 ASN174 GLY175 ALA176 ARG177 GLY178 THR179 CYS180 HIS181 TYR182 TYR183 ALA184 ASN185 LYS186 TYR187 SER188 PHE189 TRP190 LEU191 THR192 THR193 ILE194 PRO195 GLU196 GLN197 SER198 PHE199 GLN200 GLY201 THR202 PRO203 SER204 ALA205 ASP206 THR207 LEU208 LYS209 ALA210 GLY211 LEU212 ILE213 ARG214 THR215 HIS216 ILE217 SER218 ARG219 CYS220 GLN221 VAL222 CYS223 MET224 LYS225 ASN226
Ligands
Unit 7 K802 K807 CL810 GOL811 GOL812 GOL813 GOL814
Unit 8 K806 CL809 GOL810
Unit 9 K801 K805 CL808 CA814
Unit 10 CL804 GOL805
Unit 11 CL811 GOL812
Unit 12 K803 CL812 CA813
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany