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Sequence, Chains, Asymmetric and Biological Units

Title HUMAN B LACTATE DEHYDROGENASE COMPLEXED WITH NAD+ AND 4-HYDR OXADIAZOLE-3-CARBOXYLIC ACID
Keywords PROTEIN-LIGAND COMPLEX, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1T2F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE B CHAIN  A 332 2555 0
2  Protein   L-LACTATE DEHYDROGENASE B CHAIN  B 332 2555 0
3  Protein   L-LACTATE DEHYDROGENASE B CHAIN  C 332 2555 0
4  Protein   L-LACTATE DEHYDROGENASE B CHAIN  D 332 2555 0
5  Ligand   L-LACTATE DEHYDROGENASE B CHAIN  A 2 0 53
6  Ligand   L-LACTATE DEHYDROGENASE B CHAIN  B 2 0 53
7  Ligand   L-LACTATE DEHYDROGENASE B CHAIN  C 2 0 53
8  Ligand   L-LACTATE DEHYDROGENASE B CHAIN  D 2 0 53
9 Water     233 0 233
total       1569 10220 445

Proteins
Unit 1 ALA1 THR2 LEU3 LYS4 GLU5 LYS6 LEU7 ILE8 ALA9 PRO10 VAL11 ALA12 GLU13 GLU14 GLU15 ALA16 THR17 VAL18 PRO19 ASN20 ASN21 LYS22 ILE23 THR24 VAL25 VAL26 GLY27 VAL28 GLY29 GLN30 VAL31 GLY32 MET33 ALA34 CYS35 ALA36 ILE37 SER38 ILE39 LEU40 GLY41 LYS42 SER43 LEU44 ALA45 ASP46 GLU47 LEU48 ALA49 LEU50 VAL51 ASP52 VAL53 LEU54 GLU55 ASP56 LYS57 LEU58 LYS59 GLY60 GLU61 MET62 MET63 ASP64 LEU65 GLN66 HIS67 GLY68 SER69 LEU70 PHE71 LEU72 GLN73 THR74 PRO75 LYS76 ILE77 VAL78 ALA79 ASP80 LYS81 ASP82 TYR83 SER84 VAL85 THR86 ALA87 ASN88 SER89 LYS90 ILE91 VAL92 VAL93 VAL94 THR95 ALA96 GLY97 VAL98 ARG99 GLN100 GLN101 GLU102 GLY103 GLU104 SER105 ARG106 LEU107 ASN108 LEU109 VAL110 GLN111 ARG112 ASN113 VAL114 ASN115 VAL116 PHE117 LYS118 PHE119 ILE120 ILE121 PRO122 GLN123 ILE124 VAL125 LYS126 TYR127 SER128 PRO129 ASP130 CYS131 ILE132 ILE133 ILE134 VAL135 VAL136 SER137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 VAL146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 LEU153 PRO154 LYS155 HIS156 ARG157 VAL158 ILE159 GLY160 SER161 GLY162 CYS163 ASN164 LEU165 ASP166 SER167 ALA168 ARG169 PHE170 ARG171 TYR172 LEU173 MET174 ALA175 GLU176 LYS177 LEU178 GLY179 ILE180 HIS181 PRO182 SER183 SER184 CYS185 HIS186 GLY187 TRP188 ILE189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 SER197 VAL198 ALA199 VAL200 TRP201 SER202 GLY203 VAL204 ASN205 VAL206 ALA207 GLY208 VAL209 SER210 LEU211 GLN212 GLU213 LEU214 ASN215 PRO216 GLU217 MET218 GLY219 THR220 ASP221 ASN222 ASP223 SER224 GLU225 ASN226 TRP227 LYS228 GLU229 VAL230 HIS231 LYS232 MET233 VAL234 VAL235 GLU236 SER237 ALA238 TYR239 GLU240 VAL241 ILE242 LYS243 LEU244 LYS245 GLY246 TYR247 THR248 ASN249 TRP250 ALA251 ILE252 GLY253 LEU254 SER255 VAL256 ALA257 ASP258 LEU259 ILE260 GLU261 SER262 MET263 LEU264 LYS265 ASN266 LEU267 SER268 ARG269 ILE270 HIS271 PRO272 VAL273 SER274 THR275 MET276 VAL277 LYS278 GLY279 MET280 TYR281 GLY282 ILE283 GLU284 ASN285 GLU286 VAL287 PHE288 LEU289 SER290 LEU291 PRO292 CYS293 ILE294 LEU295 ASN296 ALA297 ARG298 GLY299 LEU300 THR301 SER302 VAL303 ILE304 ASN305 GLN306 LYS307 LEU308 LYS309 ASP310 ASP311 GLU312 VAL313 ALA314 GLN315 LEU316 LYS317 LYS318 SER319 ALA320 ASP321 THR322 LEU323 TRP324 ASP325 ILE326 GLN327 LYS328 ASP329 LEU330 LYS331 PHE332
Unit 2 ALA1 THR2 LEU3 LYS4 GLU5 LYS6 LEU7 ILE8 ALA9 PRO10 VAL11 ALA12 GLU13 GLU14 GLU15 ALA16 THR17 VAL18 PRO19 ASN20 ASN21 LYS22 ILE23 THR24 VAL25 VAL26 GLY27 VAL28 GLY29 GLN30 VAL31 GLY32 MET33 ALA34 CYS35 ALA36 ILE37 SER38 ILE39 LEU40 GLY41 LYS42 SER43 LEU44 ALA45 ASP46 GLU47 LEU48 ALA49 LEU50 VAL51 ASP52 VAL53 LEU54 GLU55 ASP56 LYS57 LEU58 LYS59 GLY60 GLU61 MET62 MET63 ASP64 LEU65 GLN66 HIS67 GLY68 SER69 LEU70 PHE71 LEU72 GLN73 THR74 PRO75 LYS76 ILE77 VAL78 ALA79 ASP80 LYS81 ASP82 TYR83 SER84 VAL85 THR86 ALA87 ASN88 SER89 LYS90 ILE91 VAL92 VAL93 VAL94 THR95 ALA96 GLY97 VAL98 ARG99 GLN100 GLN101 GLU102 GLY103 GLU104 SER105 ARG106 LEU107 ASN108 LEU109 VAL110 GLN111 ARG112 ASN113 VAL114 ASN115 VAL116 PHE117 LYS118 PHE119 ILE120 ILE121 PRO122 GLN123 ILE124 VAL125 LYS126 TYR127 SER128 PRO129 ASP130 CYS131 ILE132 ILE133 ILE134 VAL135 VAL136 SER137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 VAL146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 LEU153 PRO154 LYS155 HIS156 ARG157 VAL158 ILE159 GLY160 SER161 GLY162 CYS163 ASN164 LEU165 ASP166 SER167 ALA168 ARG169 PHE170 ARG171 TYR172 LEU173 MET174 ALA175 GLU176 LYS177 LEU178 GLY179 ILE180 HIS181 PRO182 SER183 SER184 CYS185 HIS186 GLY187 TRP188 ILE189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 SER197 VAL198 ALA199 VAL200 TRP201 SER202 GLY203 VAL204 ASN205 VAL206 ALA207 GLY208 VAL209 SER210 LEU211 GLN212 GLU213 LEU214 ASN215 PRO216 GLU217 MET218 GLY219 THR220 ASP221 ASN222 ASP223 SER224 GLU225 ASN226 TRP227 LYS228 GLU229 VAL230 HIS231 LYS232 MET233 VAL234 VAL235 GLU236 SER237 ALA238 TYR239 GLU240 VAL241 ILE242 LYS243 LEU244 LYS245 GLY246 TYR247 THR248 ASN249 TRP250 ALA251 ILE252 GLY253 LEU254 SER255 VAL256 ALA257 ASP258 LEU259 ILE260 GLU261 SER262 MET263 LEU264 LYS265 ASN266 LEU267 SER268 ARG269 ILE270 HIS271 PRO272 VAL273 SER274 THR275 MET276 VAL277 LYS278 GLY279 MET280 TYR281 GLY282 ILE283 GLU284 ASN285 GLU286 VAL287 PHE288 LEU289 SER290 LEU291 PRO292 CYS293 ILE294 LEU295 ASN296 ALA297 ARG298 GLY299 LEU300 THR301 SER302 VAL303 ILE304 ASN305 GLN306 LYS307 LEU308 LYS309 ASP310 ASP311 GLU312 VAL313 ALA314 GLN315 LEU316 LYS317 LYS318 SER319 ALA320 ASP321 THR322 LEU323 TRP324 ASP325 ILE326 GLN327 LYS328 ASP329 LEU330 LYS331 PHE332
Unit 3 ALA1 THR2 LEU3 LYS4 GLU5 LYS6 LEU7 ILE8 ALA9 PRO10 VAL11 ALA12 GLU13 GLU14 GLU15 ALA16 THR17 VAL18 PRO19 ASN20 ASN21 LYS22 ILE23 THR24 VAL25 VAL26 GLY27 VAL28 GLY29 GLN30 VAL31 GLY32 MET33 ALA34 CYS35 ALA36 ILE37 SER38 ILE39 LEU40 GLY41 LYS42 SER43 LEU44 ALA45 ASP46 GLU47 LEU48 ALA49 LEU50 VAL51 ASP52 VAL53 LEU54 GLU55 ASP56 LYS57 LEU58 LYS59 GLY60 GLU61 MET62 MET63 ASP64 LEU65 GLN66 HIS67 GLY68 SER69 LEU70 PHE71 LEU72 GLN73 THR74 PRO75 LYS76 ILE77 VAL78 ALA79 ASP80 LYS81 ASP82 TYR83 SER84 VAL85 THR86 ALA87 ASN88 SER89 LYS90 ILE91 VAL92 VAL93 VAL94 THR95 ALA96 GLY97 VAL98 ARG99 GLN100 GLN101 GLU102 GLY103 GLU104 SER105 ARG106 LEU107 ASN108 LEU109 VAL110 GLN111 ARG112 ASN113 VAL114 ASN115 VAL116 PHE117 LYS118 PHE119 ILE120 ILE121 PRO122 GLN123 ILE124 VAL125 LYS126 TYR127 SER128 PRO129 ASP130 CYS131 ILE132 ILE133 ILE134 VAL135 VAL136 SER137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 VAL146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 LEU153 PRO154 LYS155 HIS156 ARG157 VAL158 ILE159 GLY160 SER161 GLY162 CYS163 ASN164 LEU165 ASP166 SER167 ALA168 ARG169 PHE170 ARG171 TYR172 LEU173 MET174 ALA175 GLU176 LYS177 LEU178 GLY179 ILE180 HIS181 PRO182 SER183 SER184 CYS185 HIS186 GLY187 TRP188 ILE189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 SER197 VAL198 ALA199 VAL200 TRP201 SER202 GLY203 VAL204 ASN205 VAL206 ALA207 GLY208 VAL209 SER210 LEU211 GLN212 GLU213 LEU214 ASN215 PRO216 GLU217 MET218 GLY219 THR220 ASP221 ASN222 ASP223 SER224 GLU225 ASN226 TRP227 LYS228 GLU229 VAL230 HIS231 LYS232 MET233 VAL234 VAL235 GLU236 SER237 ALA238 TYR239 GLU240 VAL241 ILE242 LYS243 LEU244 LYS245 GLY246 TYR247 THR248 ASN249 TRP250 ALA251 ILE252 GLY253 LEU254 SER255 VAL256 ALA257 ASP258 LEU259 ILE260 GLU261 SER262 MET263 LEU264 LYS265 ASN266 LEU267 SER268 ARG269 ILE270 HIS271 PRO272 VAL273 SER274 THR275 MET276 VAL277 LYS278 GLY279 MET280 TYR281 GLY282 ILE283 GLU284 ASN285 GLU286 VAL287 PHE288 LEU289 SER290 LEU291 PRO292 CYS293 ILE294 LEU295 ASN296 ALA297 ARG298 GLY299 LEU300 THR301 SER302 VAL303 ILE304 ASN305 GLN306 LYS307 LEU308 LYS309 ASP310 ASP311 GLU312 VAL313 ALA314 GLN315 LEU316 LYS317 LYS318 SER319 ALA320 ASP321 THR322 LEU323 TRP324 ASP325 ILE326 GLN327 LYS328 ASP329 LEU330 LYS331 PHE332
Unit 4 ALA1 THR2 LEU3 LYS4 GLU5 LYS6 LEU7 ILE8 ALA9 PRO10 VAL11 ALA12 GLU13 GLU14 GLU15 ALA16 THR17 VAL18 PRO19 ASN20 ASN21 LYS22 ILE23 THR24 VAL25 VAL26 GLY27 VAL28 GLY29 GLN30 VAL31 GLY32 MET33 ALA34 CYS35 ALA36 ILE37 SER38 ILE39 LEU40 GLY41 LYS42 SER43 LEU44 ALA45 ASP46 GLU47 LEU48 ALA49 LEU50 VAL51 ASP52 VAL53 LEU54 GLU55 ASP56 LYS57 LEU58 LYS59 GLY60 GLU61 MET62 MET63 ASP64 LEU65 GLN66 HIS67 GLY68 SER69 LEU70 PHE71 LEU72 GLN73 THR74 PRO75 LYS76 ILE77 VAL78 ALA79 ASP80 LYS81 ASP82 TYR83 SER84 VAL85 THR86 ALA87 ASN88 SER89 LYS90 ILE91 VAL92 VAL93 VAL94 THR95 ALA96 GLY97 VAL98 ARG99 GLN100 GLN101 GLU102 GLY103 GLU104 SER105 ARG106 LEU107 ASN108 LEU109 VAL110 GLN111 ARG112 ASN113 VAL114 ASN115 VAL116 PHE117 LYS118 PHE119 ILE120 ILE121 PRO122 GLN123 ILE124 VAL125 LYS126 TYR127 SER128 PRO129 ASP130 CYS131 ILE132 ILE133 ILE134 VAL135 VAL136 SER137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 VAL146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 LEU153 PRO154 LYS155 HIS156 ARG157 VAL158 ILE159 GLY160 SER161 GLY162 CYS163 ASN164 LEU165 ASP166 SER167 ALA168 ARG169 PHE170 ARG171 TYR172 LEU173 MET174 ALA175 GLU176 LYS177 LEU178 GLY179 ILE180 HIS181 PRO182 SER183 SER184 CYS185 HIS186 GLY187 TRP188 ILE189 LEU190 GLY191 GLU192 HIS193 GLY194 ASP195 SER196 SER197 VAL198 ALA199 VAL200 TRP201 SER202 GLY203 VAL204 ASN205 VAL206 ALA207 GLY208 VAL209 SER210 LEU211 GLN212 GLU213 LEU214 ASN215 PRO216 GLU217 MET218 GLY219 THR220 ASP221 ASN222 ASP223 SER224 GLU225 ASN226 TRP227 LYS228 GLU229 VAL230 HIS231 LYS232 MET233 VAL234 VAL235 GLU236 SER237 ALA238 TYR239 GLU240 VAL241 ILE242 LYS243 LEU244 LYS245 GLY246 TYR247 THR248 ASN249 TRP250 ALA251 ILE252 GLY253 LEU254 SER255 VAL256 ALA257 ASP258 LEU259 ILE260 GLU261 SER262 MET263 LEU264 LYS265 ASN266 LEU267 SER268 ARG269 ILE270 HIS271 PRO272 VAL273 SER274 THR275 MET276 VAL277 LYS278 GLY279 MET280 TYR281 GLY282 ILE283 GLU284 ASN285 GLU286 VAL287 PHE288 LEU289 SER290 LEU291 PRO292 CYS293 ILE294 LEU295 ASN296 ALA297 ARG298 GLY299 LEU300 THR301 SER302 VAL303 ILE304 ASN305 GLN306 LYS307 LEU308 LYS309 ASP310 ASP311 GLU312 VAL313 ALA314 GLN315 LEU316 LYS317 LYS318 SER319 ALA320 ASP321 THR322 LEU323 TRP324 ASP325 ILE326 GLN327 LYS328 ASP329 LEU330 LYS331 PHE332

Ligands
Unit 5 NAD401 OXQ402
Unit 6 NAD403 OXQ404
Unit 7 NAD405 OXQ406
Unit 8 NAD407 OXQ408

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany