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Sequence, Chains, Asymmetric and Biological Units

Title BINDING POSITION OF RIBOSOME RECYCLING FACTOR (RRF) ON THE E. COLI 70S RIBOSOME
Keywords RRF BINDING POSITION ON THE RIBOSOME
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1T1M     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 12 12 0
2  DNA    B 42 42 0
3  Protein   RIBOSOME RECYCLING FACTOR  C 184 184 0
total       238 238 0

Proteins
Unit 3 VAL1 ASN2 PRO3 PHE4 ILE5 LYS6 GLU7 ALA8 LYS9 GLU10 LYS11 MET12 LYS13 ARG14 THR15 LEU16 GLU17 LYS18 ILE19 GLU20 ASP21 GLU22 LEU23 ARG24 LYS25 MET26 ARG27 THR28 GLY29 LYS30 PRO31 SER32 PRO33 ALA34 ILE35 LEU36 GLU37 GLU38 ILE39 LYS40 VAL41 ASP42 TYR43 TYR44 GLY45 VAL46 PRO47 THR48 PRO49 VAL50 ASN51 GLN52 LEU53 ALA54 THR55 ILE56 SER57 ILE58 SER59 GLU60 GLU61 ARG62 THR63 LEU64 VAL65 ILE66 LYS67 PRO68 TRP69 ASP70 LYS71 SER72 VAL73 LEU74 SER75 LEU76 ILE77 GLU78 LYS79 ALA80 ILE81 ASN82 ALA83 SER84 ASP85 LEU86 GLY87 LEU88 ASN89 PRO90 ILE91 ASN92 ASP93 GLY94 ASN95 VAL96 ILE97 ARG98 LEU99 VAL100 PHE101 PRO102 SER103 PRO104 THR105 THR106 GLU107 GLN108 ARG109 GLU110 LYS111 TRP112 VAL113 LYS114 LYS115 ALA116 LYS117 GLU118 ILE119 VAL120 GLU121 GLU122 GLY123 LYS124 ILE125 ALA126 ILE127 ARG128 ASN129 ILE130 ARG131 ARG132 GLU133 ILE134 LEU135 LYS136 LYS137 ILE138 LYS139 GLU140 ASP141 GLN142 LYS143 GLU144 GLY145 LEU146 ILE147 PRO148 GLU149 ASP150 ASP151 ALA152 LYS153 ARG154 LEU155 GLU156 ASN157 GLU158 ILE159 GLN160 LYS161 LEU162 THR163 ASP164 GLU165 PHE166 ILE167 GLU168 LYS169 LEU170 ASP171 GLU172 VAL173 PHE174 GLU175 ILE176 LYS177 LYS178 GLU179 GLU180 ILE181 MET182 GLU183 PHE184

Nucleic acids
Unit 1 U1061 G1062 G1063 C1064 U1065 U1066 A1067 G1068 A1069 A1070 G1071 C1072
Unit 2 G1401 C1402 C1403 C1404 G1405 U1406 C1407 A1408 C1409 A1410 C1411 C1412 A1413 U1414 G1415 G1416 G1417 A1418 G1419 U1420 A1480 U1481 G1482 A1483 C1484 U1485 G1486 G1487 G1488 G1489 U1490 G1491 A1492 A1493 G1494 U1495 C1496 G1497 U1498 A1499 A1500 C1501

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany