Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA
Keywords CRYSTAL STRUCTURE, 2-AMINOPURINE, BACTERIAL DECODING SITE RNA, FLUORESCENCE EMISSION SPECTRA, 9-BETA-D-RIBOFURANOSYL- 9H-PURIN-2-AMINE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1T0D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 17 346 22
2  RNA    B 16 331 0
3  RNA    C 17 346 22
4  RNA    D 16 331 0
5 Water     215 0 215
total       281 1354 259

Nucleic acids
Unit 1 G1 G2 U3 G4 G5 U6 G7 MTU8 A9 G10 U11 C12 G13 C14 U15 G16 G17
Unit 2 C20 A21 G22 C23 G24 U25 C26 A27 C28 A29 C30 C31 A32 C33 C34 C35
Unit 3 G1 G2 U3 G4 G5 U6 G7 MTU8 A9 G10 U11 C12 G13 C14 U15 G16 G17
Unit 4 C20 A21 G22 C23 G24 U25 C26 A27 C28 A29 C30 C31 A32 C33 C34 C35

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany