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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE SINGLE-CHAIN FV FRAGMENT 1696 IN COMPLEX WITH THE EPITOPE PEPTIDE CORRESPONDING TO N- TERMINUS OF HIV-2 PROTEASE
Keywords ANTIBODY-ANTIGEN COMPLEX; HIV INHIBITING ANTIBODY, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1SVZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SINGLE-CHAIN FV FRAGMENT 1696  A 232 1830 0
2  Protein   SINGLE-CHAIN FV FRAGMENT 1696  B 232 1830 0
3  Protein   EPITOPE PEPTIDE CORRESPONDING TO N-TERMINUS OF HIV-2 PROTEASE  C 6 55 0
4  Protein   EPITOPE PEPTIDE CORRESPONDING TO N-TERMINUS OF HIV-2 PROTEASE  D 6 55 0
5 Water     355 0 355
total       831 3770 355

Proteins
Unit 1 ASP1 ILE2 LEU3 MET4 THR5 GLN6 THR7 PRO8 LEU9 TYR10 LEU11 PRO12 VAL13 SER14 LEU15 GLY16 ASP17 GLN18 ALA19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 GLN27 THR28 ILE29 VAL30 HIS31 ASN32 ASN33 GLY34 ASN35 THR36 TYR37 LEU38 GLU39 TRP40 TYR41 LEU42 GLN43 LYS44 PRO45 GLY46 GLN47 SER48 PRO49 GLN50 LEU51 LEU52 ILE53 TYR54 LYS55 VAL56 SER57 ASN58 ARG59 PHE60 SER61 GLY62 VAL63 PRO64 ASP65 ARG66 PHE67 SER68 GLY69 SER70 GLY71 SER72 GLY73 THR74 ASP75 PHE76 THR77 LEU78 LYS79 ILE80 SER81 ARG82 VAL83 GLU84 ALA85 GLU86 ASP87 LEU88 GLY89 ILE90 TYR91 TYR92 CYS93 PHE94 GLN95 GLY96 SER97 HIS98 PHE99 PRO100 PRO101 THR102 PHE103 GLY104 GLY105 GLY106 THR107 LYS108 LEU109 GLU110 ILE111 LYS112 GLU128 VAL129 GLN130 LEU131 GLN132 GLN133 SER134 GLY135 PRO136 GLU137 LEU138 LYS139 LYS140 PRO141 GLY142 GLU143 THR144 VAL145 LYS146 ILE147 SER148 CYS149 LYS150 ALA151 THR152 ASN153 TYR154 ALA155 PHE156 THR157 ASP158 TYR159 SER160 MET161 HIS162 TRP163 VAL164 LYS165 GLN166 ALA167 PRO168 GLY169 GLY170 ASP171 LEU172 LYS173 TYR174 VAL175 GLY176 TRP177 ILE178 ASN179 THR180 GLU181 THR182 ASP183 GLU184 PRO185 THR186 PHE187 ALA188 ASP189 ASP190 PHE191 LYS192 GLY193 ARG194 PHE195 ALA196 PHE197 SER198 LEU199 ASP200 THR201 SER202 THR203 SER204 THR205 ALA206 PHE207 LEU208 GLN209 ILE210 ASN211 ASN212 LEU213 LYS214 ASN215 GLU216 ASP217 THR218 ALA219 THR220 TYR221 PHE222 CYS223 VAL224 ARG225 ASP226 ARG227 HIS228 ASP229 TYR230 GLY231 GLU232 ILE233 PHE234 THR235 TYR236 TRP237 GLY238 GLN239 GLY240 THR241 THR242 VAL243 THR244 VAL245 SER246 SER247
Unit 2 ASP1 ILE2 LEU3 MET4 THR5 GLN6 THR7 PRO8 LEU9 TYR10 LEU11 PRO12 VAL13 SER14 LEU15 GLY16 ASP17 GLN18 ALA19 SER20 ILE21 SER22 CYS23 ARG24 SER25 SER26 GLN27 THR28 ILE29 VAL30 HIS31 ASN32 ASN33 GLY34 ASN35 THR36 TYR37 LEU38 GLU39 TRP40 TYR41 LEU42 GLN43 LYS44 PRO45 GLY46 GLN47 SER48 PRO49 GLN50 LEU51 LEU52 ILE53 TYR54 LYS55 VAL56 SER57 ASN58 ARG59 PHE60 SER61 GLY62 VAL63 PRO64 ASP65 ARG66 PHE67 SER68 GLY69 SER70 GLY71 SER72 GLY73 THR74 ASP75 PHE76 THR77 LEU78 LYS79 ILE80 SER81 ARG82 VAL83 GLU84 ALA85 GLU86 ASP87 LEU88 GLY89 ILE90 TYR91 TYR92 CYS93 PHE94 GLN95 GLY96 SER97 HIS98 PHE99 PRO100 PRO101 THR102 PHE103 GLY104 GLY105 GLY106 THR107 LYS108 LEU109 GLU110 ILE111 LYS112 GLU128 VAL129 GLN130 LEU131 GLN132 GLN133 SER134 GLY135 PRO136 GLU137 LEU138 LYS139 LYS140 PRO141 GLY142 GLU143 THR144 VAL145 LYS146 ILE147 SER148 CYS149 LYS150 ALA151 THR152 ASN153 TYR154 ALA155 PHE156 THR157 ASP158 TYR159 SER160 MET161 HIS162 TRP163 VAL164 LYS165 GLN166 ALA167 PRO168 GLY169 GLY170 ASP171 LEU172 LYS173 TYR174 VAL175 GLY176 TRP177 ILE178 ASN179 THR180 GLU181 THR182 ASP183 GLU184 PRO185 THR186 PHE187 ALA188 ASP189 ASP190 PHE191 LYS192 GLY193 ARG194 PHE195 ALA196 PHE197 SER198 LEU199 ASP200 THR201 SER202 THR203 SER204 THR205 ALA206 PHE207 LEU208 GLN209 ILE210 ASN211 ASN212 LEU213 LYS214 ASN215 GLU216 ASP217 THR218 ALA219 THR220 TYR221 PHE222 CYS223 VAL224 ARG225 ASP226 ARG227 HIS228 ASP229 TYR230 GLY231 GLU232 ILE233 PHE234 THR235 TYR236 TRP237 GLY238 GLN239 GLY240 THR241 THR242 VAL243 THR244 VAL245 SER246 SER247
Unit 3 PRO1 GLN2 PHE3 SER4 LEU5 TRP6
Unit 4 PRO1 GLN2 PHE3 SER4 LEU5 TRP6

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany