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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PEPTIDE DEFORMYLASE FROM LEPTOSPIRA INTERROGANS (LIPDF) AT PH7.5
Keywords CLOSED CONFORMATION, DIMER, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1SV2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PEPTIDE DEFORMYLASE  A 171 1337 0
2  Protein   PEPTIDE DEFORMYLASE  B 172 1351 0
3  Ligand   PEPTIDE DEFORMYLASE  A 2 0 9
4  Ligand   PEPTIDE DEFORMYLASE  B 4 0 15
5 Water     52 0 52
total       401 2688 76

Proteins
Unit 1 SER1 VAL2 ARG3 LYS4 ILE5 LEU6 ARG7 MET8 GLY9 ASP10 PRO11 ILE12 LEU13 ARG14 LYS15 ILE16 SER17 GLU18 PRO19 VAL20 THR21 GLU22 ASP23 GLU24 ILE25 GLN26 THR27 LYS28 GLU29 PHE30 LYS31 LYS32 LEU33 ILE34 ARG35 ASP36 MET37 PHE38 ASP39 THR40 MET41 ARG42 HIS43 ALA44 GLU45 GLY46 VAL47 GLY48 LEU49 ALA50 ALA51 PRO52 GLN53 ILE54 GLY55 ILE56 LEU57 LYS58 GLN59 ILE60 VAL61 VAL62 VAL63 GLY64 SER65 GLU66 ASP67 ASN68 GLU69 ARG70 TYR71 PRO72 GLY73 THR74 PRO75 ASP76 VAL77 PRO78 GLU79 ARG80 ILE81 ILE82 LEU83 ASN84 PRO85 VAL86 ILE87 THR88 PRO89 LEU90 THR91 LYS92 ASP93 THR94 SER95 GLY96 PHE97 TRP98 GLU99 GLY100 CYS101 LEU102 SER103 VAL104 PRO105 GLY106 MET107 ARG108 GLY109 TYR110 VAL111 GLU112 ARG113 PRO114 ASN115 GLN116 ILE117 ARG118 MET119 GLN120 TRP121 MET122 ASP123 GLU124 LYS125 GLY126 ASN127 GLN128 PHE129 ASP130 GLU131 THR132 ILE133 ASP134 GLY135 TYR136 LYS137 ALA138 ILE139 VAL140 TYR141 GLN142 HIS143 GLU144 CYS145 ASP146 HIS147 LEU148 GLN149 GLY150 ILE151 LEU152 TYR153 VAL154 ASP155 ARG156 LEU157 LYS158 ASP159 THR160 LYS161 LEU162 PHE163 GLY164 PHE165 ASN166 GLU167 THR168 LEU169 ASP170 SER171
Unit 2 SER1 VAL2 ARG3 LYS4 ILE5 LEU6 ARG7 MET8 GLY9 ASP10 PRO11 ILE12 LEU13 ARG14 LYS15 ILE16 SER17 GLU18 PRO19 VAL20 THR21 GLU22 ASP23 GLU24 ILE25 GLN26 THR27 LYS28 GLU29 PHE30 LYS31 LYS32 LEU33 ILE34 ARG35 ASP36 MET37 PHE38 ASP39 THR40 MET41 ARG42 HIS43 ALA44 GLU45 GLY46 VAL47 GLY48 LEU49 ALA50 ALA51 PRO52 GLN53 ILE54 GLY55 ILE56 LEU57 LYS58 GLN59 ILE60 VAL61 VAL62 VAL63 GLY64 SER65 GLU66 ASP67 ASN68 GLU69 ARG70 TYR71 PRO72 GLY73 THR74 PRO75 ASP76 VAL77 PRO78 GLU79 ARG80 ILE81 ILE82 LEU83 ASN84 PRO85 VAL86 ILE87 THR88 PRO89 LEU90 THR91 LYS92 ASP93 THR94 SER95 GLY96 PHE97 TRP98 GLU99 GLY100 CYS101 LEU102 SER103 VAL104 PRO105 GLY106 MET107 ARG108 GLY109 TYR110 VAL111 GLU112 ARG113 PRO114 ASN115 GLN116 ILE117 ARG118 MET119 GLN120 TRP121 MET122 ASP123 GLU124 LYS125 GLY126 ASN127 GLN128 PHE129 ASP130 GLU131 THR132 ILE133 ASP134 GLY135 TYR136 LYS137 ALA138 ILE139 VAL140 TYR141 GLN142 HIS143 GLU144 CYS145 ASP146 HIS147 LEU148 GLN149 GLY150 ILE151 LEU152 TYR153 VAL154 ASP155 ARG156 LEU157 LYS158 ASP159 THR160 LYS161 LEU162 PHE163 GLY164 PHE165 ASN166 GLU167 THR168 LEU169 ASP170 SER171 SER172

Ligands
Unit 3 DTT513 ZN1001
Unit 4 ZN1001 DTT1513 FMT1514 FMT2001

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany