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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF SKI8P, A WD REPEAT PROTEIN INVOLVED IN MRNA DEG AND MEIOTIC RECOMBINATION
Keywords WD REPEAT, BETA-TRANSDUCIN REPEAT, WD40 REPEAT, BETA PROPELL ANTIVIRAL PROTEIN, RECOMBINATION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1SQ9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ANTIVIRAL PROTEIN SKI8  A 378 2971 0
2  Ligand   ANTIVIRAL PROTEIN SKI8  A 2 0 10
3 Water     230 0 230
total       610 2971 240

Proteins
Unit 1 LYS3 VAL4 PHE5 ILE6 ALA7 THR8 ALA9 ASN10 ALA11 GLY12 LYS13 ALA14 HIS15 ASP16 ALA17 ASP18 ILE19 PHE20 SER21 VAL22 SER23 ALA24 CYS25 ASN26 SER27 PHE28 THR29 VAL30 SER31 CYS32 SER33 GLY34 ASP35 GLY36 TYR37 LEU38 LYS39 VAL40 TRP41 ASP42 ASN43 LYS44 LEU45 LEU46 ASP47 ASN48 GLU49 ASN50 PRO51 LYS52 ASP53 LYS54 SER55 TYR56 SER57 HIS58 PHE59 VAL60 HIS61 LYS62 SER63 GLY64 LEU65 HIS66 HIS67 VAL68 ASP69 VAL70 LEU71 GLN72 ALA73 ILE74 GLU75 ARG76 ASP77 ALA78 PHE79 GLU80 LEU81 CYS82 LEU83 VAL84 ALA85 THR86 THR87 SER88 PHE89 SER90 GLY91 ASP92 LEU93 LEU94 PHE95 TYR96 ARG97 ILE98 THR99 ARG100 GLU101 ASP102 GLU103 THR104 LYS105 LYS106 VAL107 ILE108 PHE109 GLU110 LYS111 LEU112 ASP113 LEU114 LEU115 ASP116 SER117 ASP118 MET119 LYS120 LYS121 HIS122 SER123 PHE124 TRP125 ALA126 LEU127 LYS128 TRP129 GLY130 ALA131 SER132 ASN133 SER138 HIS139 ARG140 LEU141 VAL142 ALA143 THR144 ASP145 VAL146 LYS147 GLY148 THR149 THR150 TYR151 ILE152 TRP153 LYS154 PHE155 HIS156 PRO157 PHE158 ALA159 ASP160 GLU161 SER162 ASN163 SER164 LEU165 THR166 LEU167 ASN168 TRP169 SER170 PRO171 THR172 LEU173 GLU174 LEU175 GLN176 GLY177 THR178 VAL179 GLU180 SER181 PRO182 MET183 THR184 PRO185 SER186 GLN187 PHE188 ALA189 THR190 SER191 VAL192 ASP193 ILE194 SER195 GLU196 ARG197 GLY198 LEU199 ILE200 ALA201 THR202 GLY203 PHE204 ASN205 ASN206 GLY207 THR208 VAL209 GLN210 ILE211 SER212 GLU213 LEU214 SER215 THR216 LEU217 ARG218 PRO219 LEU220 TYR221 ASN222 PHE223 GLU224 SER225 GLN226 HIS227 ASN231 ASN232 SER233 ASN234 SER235 ILE236 ARG237 SER238 VAL239 LYS240 PHE241 SER242 PRO243 GLN244 GLY245 SER246 LEU247 LEU248 ALA249 ILE250 ALA251 HIS252 ASP253 SER254 ASN255 SER256 PHE257 GLY258 CYS259 ILE260 THR261 LEU262 TYR263 GLU264 THR265 GLU266 PHE267 GLY268 GLU269 ARG270 ILE271 GLY272 SER273 LEU274 SER275 VAL276 PRO277 GLY286 GLU287 PHE288 ALA289 HIS290 SER291 SER292 TRP293 VAL294 MET295 SER296 LEU297 SER298 PHE299 ASN300 ASP301 SER302 GLY303 GLU304 THR305 LEU306 CYS307 SER308 ALA309 GLY310 TRP311 ASP312 GLY313 LYS314 LEU315 ARG316 PHE317 TRP318 ASP319 VAL320 LYS321 THR322 LYS323 GLU324 ARG325 ILE326 THR327 THR328 LEU329 ASN330 MET331 HIS332 CYS333 ASP334 ASP335 ILE336 GLU337 ILE338 GLU339 GLU340 ASP341 ILE342 LEU343 ALA344 VAL345 ASP346 GLU347 HIS348 GLY349 ASP350 SER351 LEU352 ALA353 GLU354 PRO355 GLY356 VAL357 PHE358 ASP359 VAL360 LYS361 PHE362 LEU363 LYS364 LYS365 GLY366 TRP367 ARG368 SER369 GLY370 MET371 GLY372 ALA373 ASP374 LEU375 ASN376 GLU377 SER378 LEU379 CYS380 CYS381 VAL382 CYS383 LEU384 ASP385 ARG386 SER387 ILE388 ARG389 TRP390 PHE391 ARG392 GLU393 ALA394 GLY395

Ligands
Unit 2 SO4400 SO4401

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany