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Sequence, Chains, Asymmetric and Biological Units

Title CATALYTIC DOMAIN OF HUMAN PHOSPHODIESTERASE 3B IN COMPLEX WITH A DIHYDROPYRIDAZINE INHIBITOR
Keywords PDE3B PHOSPHODIESTERASE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1SO2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  A 363 2916 0
2  Protein   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  B 363 2909 0
3  Protein   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  C 372 2964 0
4  Protein   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  D 365 2916 0
5  Ligand   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  A 6 0 81
6  Ligand   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  B 5 0 80
7  Ligand   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  C 3 0 32
8  Ligand   CGMP-INHIBITED 3',5'-CYCLIC PHOSPHODIESTERASE B  D 3 0 32
9 Water     362 0 362
total       1842 11705 587
Proteins
Unit 1 LEU659 ASP660 LEU661 ILE662 LEU663 VAL664 GLU665 GLU666 TYR667 ASP668 SER669 LEU670 ILE671 GLU672 LYS673 MET674 SER675 ASN676 TRP677 ASN678 PHE679 PRO680 ILE681 PHE682 GLU683 LEU684 VAL685 GLU686 LYS687 MET688 GLY689 GLU690 LYS691 SER692 GLY693 ARG694 ILE695 LEU696 SER697 GLN698 VAL699 MET700 TYR701 THR702 LEU703 PHE704 GLN705 ASP706 THR707 GLY708 LEU709 LEU710 GLU711 ILE712 PHE713 LYS714 ILE715 PRO716 THR717 GLN718 GLN719 PHE720 MET721 ASN722 TYR723 PHE724 ARG725 ALA726 LEU727 GLU728 ASN729 GLY730 TYR731 ARG732 ASP733 ILE734 PRO735 TYR736 HIS737 ASN738 ARG739 ILE740 HIS741 ALA742 THR743 ASP744 VAL745 LEU746 HIS747 ALA748 VAL749 TRP750 TYR751 LEU752 THR753 THR754 ARG755 PRO756 VAL757 PRO758 GLY759 LEU760 GLN761 GLN762 ILE763 HIS764 ASN765 GLY766 GLY782 ARG783 ILE784 ALA785 TYR786 ILE787 SER788 SER789 LYS790 SER791 CYS792 SER793 ASN794 PRO795 ASP796 GLU797 SER798 TYR799 GLY800 CYS801 LEU802 SER803 SER804 ASN805 ILE806 PRO807 ALA808 LEU809 GLU810 LEU811 MET812 ALA813 LEU814 TYR815 VAL816 ALA817 ALA818 ALA819 MET820 HIS821 ASP822 TYR823 ASP824 HIS825 PRO826 GLY827 ARG828 THR829 ASN830 ALA831 PHE832 LEU833 VAL834 ALA835 THR836 ASN837 ALA838 PRO839 GLN840 ALA841 VAL842 LEU843 TYR844 ASN845 ASP846 ARG847 SER848 VAL849 LEU850 GLU851 ASN852 HIS853 HIS854 ALA855 ALA856 SER857 ALA858 TRP859 ASN860 LEU861 TYR862 LEU863 SER864 ARG865 PRO866 GLU867 TYR868 ASN869 PHE870 LEU871 LEU872 HIS873 LEU874 ASP875 HIS876 VAL877 GLU878 PHE879 LYS880 ARG881 PHE882 ARG883 PHE884 LEU885 VAL886 ILE887 GLU888 ALA889 ILE890 LEU891 ALA892 THR893 ASP894 LEU895 LYS896 LYS897 HIS898 PHE899 ASP900 PHE901 LEU902 ALA903 GLU904 PHE905 ASN906 ALA907 LYS908 ALA909 ASN910 ASP911 VAL912 ASN913 SER914 ASN915 GLY916 ILE917 GLU918 TRP919 SER920 ASN921 GLU922 ASN923 ASP924 ARG925 LEU926 LEU927 VAL928 CYS929 GLN930 VAL931 CYS932 ILE933 LYS934 LEU935 ALA936 ASP937 ILE938 ASN939 GLY940 PRO941 ALA942 LYS943 VAL944 ARG945 ASP946 LEU947 HIS948 LEU949 LYS950 TRP951 THR952 GLU953 GLY954 ILE955 VAL956 ASN957 GLU958 PHE959 TYR960 GLU961 GLN962 GLY963 ASP964 GLU965 GLU966 ALA967 ASN968 LEU969 GLY970 LEU971 PRO972 ILE973 SER974 PRO975 PHE976 MET977 ASP978 ARG979 SER980 SER981 PRO982 GLN983 LEU984 ALA985 LYS986 LEU987 GLN988 GLU989 SER990 PHE991 ILE992 THR993 HIS994 ILE995 VAL996 GLY997 PRO998 LEU999 CYS1000 ASN1001 SER1002 TYR1003 ASP1004 ALA1005 ALA1006 GLY1007 LEU1008 LEU1009 PRO1010 GLY1011 GLN1012 TRP1013 LEU1014 GLU1015 SER1053 ARG1054 ARG1055 ARG1056 ILE1057 PHE1058 CYS1059 GLN1060 LEU1061 MET1062 HIS1063 HIS1064 LEU1065 THR1066 GLU1067 ASN1068 HIS1069 LYS1070 ILE1071 TRP1072 LYS1073
Unit 2 LEU659 ASP660 LEU661 ILE662 LEU663 VAL664 GLU665 GLU666 TYR667 ASP668 SER669 LEU670 ILE671 GLU672 LYS673 MET674 SER675 ASN676 TRP677 ASN678 PHE679 PRO680 ILE681 PHE682 GLU683 LEU684 VAL685 GLU686 LYS687 MET688 GLY689 GLU690 LYS691 SER692 GLY693 ARG694 ILE695 LEU696 SER697 GLN698 VAL699 MET700 TYR701 THR702 LEU703 PHE704 GLN705 ASP706 THR707 GLY708 LEU709 LEU710 GLU711 ILE712 PHE713 LYS714 ILE715 PRO716 THR717 GLN718 GLN719 PHE720 MET721 ASN722 TYR723 PHE724 ARG725 ALA726 LEU727 GLU728 ASN729 GLY730 TYR731 ARG732 ASP733 ILE734 PRO735 TYR736 HIS737 ASN738 ARG739 ILE740 HIS741 ALA742 THR743 ASP744 VAL745 LEU746 HIS747 ALA748 VAL749 TRP750 TYR751 LEU752 THR753 THR754 ARG755 PRO756 VAL757 PRO758 GLY759 LEU760 GLN761 GLN762 ILE763 HIS764 ASN765 GLY766 GLY782 ARG783 ILE784 ALA785 TYR786 ILE787 SER788 SER789 LYS790 SER791 CYS792 SER793 ASN794 PRO795 ASP796 GLU797 SER798 TYR799 GLY800 CYS801 LEU802 SER803 SER804 ASN805 ILE806 PRO807 ALA808 LEU809 GLU810 LEU811 MET812 ALA813 LEU814 TYR815 VAL816 ALA817 ALA818 ALA819 MET820 HIS821 ASP822 TYR823 ASP824 HIS825 PRO826 GLY827 ARG828 THR829 ASN830 ALA831 PHE832 LEU833 VAL834 ALA835 THR836 ASN837 ALA838 PRO839 GLN840 ALA841 VAL842 LEU843 TYR844 ASN845 ASP846 ARG847 SER848 VAL849 LEU850 GLU851 ASN852 HIS853 HIS854 ALA855 ALA856 SER857 ALA858 TRP859 ASN860 LEU861 TYR862 LEU863 SER864 ARG865 PRO866 GLU867 TYR868 ASN869 PHE870 LEU871 LEU872 HIS873 LEU874 ASP875 HIS876 VAL877 GLU878 PHE879 LYS880 ARG881 PHE882 ARG883 PHE884 LEU885 VAL886 ILE887 GLU888 ALA889 ILE890 LEU891 ALA892 THR893 ASP894 LEU895 LYS896 LYS897 HIS898 PHE899 ASP900 PHE901 LEU902 ALA903 GLU904 PHE905 ASN906 ALA907 LYS908 ALA909 ASN910 ASP911 VAL912 ASN913 SER914 ASN915 GLY916 ILE917 GLU918 TRP919 SER920 ASN921 GLU922 ASN923 ASP924 ARG925 LEU926 LEU927 VAL928 CYS929 GLN930 VAL931 CYS932 ILE933 LYS934 LEU935 ALA936 ASP937 ILE938 ASN939 GLY940 PRO941 ALA942 LYS943 VAL944 ARG945 ASP946 LEU947 HIS948 LEU949 LYS950 TRP951 THR952 GLU953 GLY954 ILE955 VAL956 ASN957 GLU958 PHE959 TYR960 GLU961 GLN962 GLY963 ASP964 GLU965 GLU966 ALA967 ASN968 LEU969 GLY970 LEU971 PRO972 ILE973 SER974 PRO975 PHE976 MET977 ASP978 ARG979 SER980 SER981 PRO982 GLN983 LEU984 ALA985 LYS986 LEU987 GLN988 GLU989 SER990 PHE991 ILE992 THR993 HIS994 ILE995 VAL996 GLY997 PRO998 LEU999 CYS1000 ASN1001 SER1002 TYR1003 ASP1004 ALA1005 ALA1006 GLY1007 LEU1008 LEU1009 PRO1010 GLY1011 GLN1012 TRP1013 LEU1014 GLU1015 SER1053 ARG1054 ARG1055 ARG1056 ILE1057 PHE1058 CYS1059 GLN1060 LEU1061 MET1062 HIS1063 HIS1064 LEU1065 THR1066 GLU1067 ASN1068 HIS1069 LYS1070 ILE1071 TRP1072 LYS1073
Unit 3 LEU659 ASP660 LEU661 ILE662 LEU663 VAL664 GLU665 GLU666 TYR667 ASP668 SER669 LEU670 ILE671 GLU672 LYS673 MET674 SER675 ASN676 TRP677 ASN678 PHE679 PRO680 ILE681 PHE682 GLU683 LEU684 VAL685 GLU686 LYS687 MET688 GLY689 GLU690 LYS691 SER692 GLY693 ARG694 ILE695 LEU696 SER697 GLN698 VAL699 MET700 TYR701 THR702 LEU703 PHE704 GLN705 ASP706 THR707 GLY708 LEU709 LEU710 GLU711 ILE712 PHE713 LYS714 ILE715 PRO716 THR717 GLN718 GLN719 PHE720 MET721 ASN722 TYR723 PHE724 ARG725 ALA726 LEU727 GLU728 ASN729 GLY730 TYR731 ARG732 ASP733 ILE734 PRO735 TYR736 HIS737 ASN738 ARG739 ILE740 HIS741 ALA742 THR743 ASP744 VAL745 LEU746 HIS747 ALA748 VAL749 TRP750 TYR751 LEU752 THR753 THR754 ARG755 PRO756 VAL757 PRO758 GLY759 LEU760 GLN761 GLN762 ILE763 HIS764 ASN765 GLY766 CYS767 ASP774 SER775 ASP776 GLY777 ARG778 ILE779 ASN780 HIS781 GLY782 ARG783 ILE784 ALA785 TYR786 ILE787 SER788 SER789 LYS790 SER791 CYS792 SER793 ASN794 PRO795 ASP796 GLU797 SER798 TYR799 GLY800 CYS801 LEU802 SER803 SER804 ASN805 ILE806 PRO807 ALA808 LEU809 GLU810 LEU811 MET812 ALA813 LEU814 TYR815 VAL816 ALA817 ALA818 ALA819 MET820 HIS821 ASP822 TYR823 ASP824 HIS825 PRO826 GLY827 ARG828 THR829 ASN830 ALA831 PHE832 LEU833 VAL834 ALA835 THR836 ASN837 ALA838 PRO839 GLN840 ALA841 VAL842 LEU843 TYR844 ASN845 ASP846 ARG847 SER848 VAL849 LEU850 GLU851 ASN852 HIS853 HIS854 ALA855 ALA856 SER857 ALA858 TRP859 ASN860 LEU861 TYR862 LEU863 SER864 ARG865 PRO866 GLU867 TYR868 ASN869 PHE870 LEU871 LEU872 HIS873 LEU874 ASP875 HIS876 VAL877 GLU878 PHE879 LYS880 ARG881 PHE882 ARG883 PHE884 LEU885 VAL886 ILE887 GLU888 ALA889 ILE890 LEU891 ALA892 THR893 ASP894 LEU895 LYS896 LYS897 HIS898 PHE899 ASP900 PHE901 LEU902 ALA903 GLU904 PHE905 ASN906 ALA907 LYS908 ALA909 ASN910 ASP911 VAL912 ASN913 SER914 ASN915 GLY916 ILE917 GLU918 TRP919 SER920 ASN921 GLU922 ASN923 ASP924 ARG925 LEU926 LEU927 VAL928 CYS929 GLN930 VAL931 CYS932 ILE933 LYS934 LEU935 ALA936 ASP937 ILE938 ASN939 GLY940 PRO941 ALA942 LYS943 VAL944 ARG945 ASP946 LEU947 HIS948 LEU949 LYS950 TRP951 THR952 GLU953 GLY954 ILE955 VAL956 ASN957 GLU958 PHE959 TYR960 GLU961 GLN962 GLY963 ASP964 GLU965 GLU966 ALA967 ASN968 LEU969 GLY970 LEU971 PRO972 ILE973 SER974 PRO975 PHE976 MET977 ASP978 ARG979 SER980 SER981 PRO982 GLN983 LEU984 ALA985 LYS986 LEU987 GLN988 GLU989 SER990 PHE991 ILE992 THR993 HIS994 ILE995 VAL996 GLY997 PRO998 LEU999 CYS1000 ASN1001 SER1002 TYR1003 ASP1004 ALA1005 ALA1006 GLY1007 LEU1008 LEU1009 PRO1010 GLY1011 GLN1012 TRP1013 LEU1014 GLU1015 SER1053 ARG1054 ARG1055 ARG1056 ILE1057 PHE1058 CYS1059 GLN1060 LEU1061 MET1062 HIS1063 HIS1064 LEU1065 THR1066 GLU1067 ASN1068 HIS1069 LYS1070 ILE1071 TRP1072 LYS1073
Unit 4 LEU659 ASP660 LEU661 ILE662 LEU663 VAL664 GLU665 GLU666 TYR667 ASP668 SER669 LEU670 ILE671 GLU672 LYS673 MET674 SER675 ASN676 TRP677 ASN678 PHE679 PRO680 ILE681 PHE682 GLU683 LEU684 VAL685 GLU686 LYS687 MET688 GLY689 GLU690 LYS691 SER692 GLY693 ARG694 ILE695 LEU696 SER697 GLN698 VAL699 MET700 TYR701 THR702 LEU703 PHE704 GLN705 ASP706 THR707 GLY708 LEU709 LEU710 GLU711 ILE712 PHE713 LYS714 ILE715 PRO716 THR717 GLN718 GLN719 PHE720 MET721 ASN722 TYR723 PHE724 ARG725 ALA726 LEU727 GLU728 ASN729 GLY730 TYR731 ARG732 ASP733 ILE734 PRO735 TYR736 HIS737 ASN738 ARG739 ILE740 HIS741 ALA742 THR743 ASP744 VAL745 LEU746 HIS747 ALA748 VAL749 TRP750 TYR751 LEU752 THR753 THR754 ARG755 PRO756 VAL757 PRO758 GLY759 LEU760 GLN761 GLN762 ILE763 HIS764 ASN765 GLY766 ASN780 HIS781 GLY782 ARG783 ILE784 ALA785 TYR786 ILE787 SER788 SER789 LYS790 SER791 CYS792 SER793 ASN794 PRO795 ASP796 GLU797 SER798 TYR799 GLY800 CYS801 LEU802 SER803 SER804 ASN805 ILE806 PRO807 ALA808 LEU809 GLU810 LEU811 MET812 ALA813 LEU814 TYR815 VAL816 ALA817 ALA818 ALA819 MET820 HIS821 ASP822 TYR823 ASP824 HIS825 PRO826 GLY827 ARG828 THR829 ASN830 ALA831 PHE832 LEU833 VAL834 ALA835 THR836 ASN837 ALA838 PRO839 GLN840 ALA841 VAL842 LEU843 TYR844 ASN845 ASP846 ARG847 SER848 VAL849 LEU850 GLU851 ASN852 HIS853 HIS854 ALA855 ALA856 SER857 ALA858 TRP859 ASN860 LEU861 TYR862 LEU863 SER864 ARG865 PRO866 GLU867 TYR868 ASN869 PHE870 LEU871 LEU872 HIS873 LEU874 ASP875 HIS876 VAL877 GLU878 PHE879 LYS880 ARG881 PHE882 ARG883 PHE884 LEU885 VAL886 ILE887 GLU888 ALA889 ILE890 LEU891 ALA892 THR893 ASP894 LEU895 LYS896 LYS897 HIS898 PHE899 ASP900 PHE901 LEU902 ALA903 GLU904 PHE905 ASN906 ALA907 LYS908 ALA909 ASN910 ASP911 VAL912 ASN913 SER914 ASN915 GLY916 ILE917 GLU918 TRP919 SER920 ASN921 GLU922 ASN923 ASP924 ARG925 LEU926 LEU927 VAL928 CYS929 GLN930 VAL931 CYS932 ILE933 LYS934 LEU935 ALA936 ASP937 ILE938 ASN939 GLY940 PRO941 ALA942 LYS943 VAL944 ARG945 ASP946 LEU947 HIS948 LEU949 LYS950 TRP951 THR952 GLU953 GLY954 ILE955 VAL956 ASN957 GLU958 PHE959 TYR960 GLU961 GLN962 GLY963 ASP964 GLU965 GLU966 ALA967 ASN968 LEU969 GLY970 LEU971 PRO972 ILE973 SER974 PRO975 PHE976 MET977 ASP978 ARG979 SER980 SER981 PRO982 GLN983 LEU984 ALA985 LYS986 LEU987 GLN988 GLU989 SER990 PHE991 ILE992 THR993 HIS994 ILE995 VAL996 GLY997 PRO998 LEU999 CYS1000 ASN1001 SER1002 TYR1003 ASP1004 ALA1005 ALA1006 GLY1007 LEU1008 LEU1009 PRO1010 GLY1011 GLN1012 TRP1013 LEU1014 GLU1015 ALA1016 GLU1017 ARG1055 ARG1056 ILE1057 PHE1058 CYS1059 GLN1060 LEU1061 MET1062 HIS1063 HIS1064 LEU1065 THR1066 GLU1067 ASN1068 HIS1069 LYS1070 ILE1071 TRP1072 LYS1073
Ligands
Unit 5 HG9453 HG9454 666461 MG471 MG472 MG479
Unit 6 HG9451 HG9452 666462 MG473 MG474
Unit 7 666463 MG475 MG476
Unit 8 666464 MG477 MG478
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany