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Sequence, Chains, Asymmetric and Biological Units

Title AGGLUTININ FROM RICINUS COMMUNIS WITH GALACTOAZA
Keywords RIBOSOME-INACTIVATING PROTEIN, IMMUNOTOXIN, AGGLUTININ RICIN HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1RZO     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AGGLUTININ  A 259 2038 0
2  Protein   AGGLUTININ  B 262 2044 0
3  Protein   AGGLUTININ  C 260 2045 0
4  Protein   AGGLUTININ  D 262 2044 0
5  Ligand   AGGLUTININ  A 4 0 27
6  Ligand   AGGLUTININ  B 8 0 75
7  Ligand   AGGLUTININ  C 3 0 22
8  Ligand   AGGLUTININ  D 6 0 58
9 Water     406 0 406
total       1470 8171 588
Proteins
Unit 1 LYS1004 GLN1005 TYR1006 PRO1007 ILE1008 ILE1009 ASN1010 PHE1011 THR1012 THR1013 ALA1014 ASP1015 ALA1016 THR1017 VAL1018 GLU1019 SER1020 TYR1021 THR1022 ASN1023 PHE1024 ILE1025 ARG1026 ALA1027 VAL1028 ARG1029 SER1030 HIS1031 LEU1032 THR1033 THR1034 GLY1035 ALA1036 ASP1037 VAL1038 ARG1039 HIS1040 GLU1041 ILE1042 PRO1043 VAL1044 LEU1045 PRO1046 ASN1047 ARG1048 VAL1049 GLY1050 LEU1051 PRO1052 ILE1053 SER1054 GLN1055 ARG1056 PHE1057 ILE1058 LEU1059 VAL1060 GLU1061 LEU1062 SER1063 ASN1064 HIS1065 ALA1066 GLU1067 LEU1068 SER1069 VAL1070 THR1071 LEU1072 ALA1073 LEU1074 ASP1075 VAL1076 THR1077 ASN1078 ALA1079 TYR1080 VAL1081 VAL1082 GLY1083 CYS1084 ARG1085 ALA1086 GLY1087 ASN1088 SER1089 ALA1090 TYR1091 PHE1092 PHE1093 HIS1094 PRO1095 ASP1096 ASN1097 GLN1098 GLU1099 ASP1100 ALA1101 GLU1102 ALA1103 ILE1104 THR1105 HIS1106 LEU1107 PHE1108 THR1109 ASP1110 VAL1111 GLN1112 ASN1113 SER1114 PHE1115 THR1116 PHE1117 ALA1118 PHE1119 GLY1120 GLY1121 ASN1122 TYR1123 ASP1124 ARG1125 LEU1126 GLU1127 GLN1128 LEU1129 GLY1130 GLY1131 LEU1132 ARG1133 GLU1134 ASN1135 ILE1136 GLU1137 LEU1138 GLY1139 THR1140 GLY1141 PRO1142 LEU1143 GLU1144 ASP1145 ALA1146 ILE1147 SER1148 ALA1149 LEU1150 TYR1151 TYR1152 TYR1153 SER1154 THR1155 CYS1156 GLY1157 THR1158 GLN1159 ILE1160 PRO1161 THR1162 LEU1163 ALA1164 ARG1165 SER1166 PHE1167 MET1168 VAL1169 CYS1170 ILE1171 GLN1172 MET1173 ILE1174 SER1175 GLU1176 ALA1177 ALA1178 ARG1179 PHE1180 GLN1181 TYR1182 ILE1183 GLU1184 GLY1185 GLU1186 MET1187 ARG1188 THR1189 ARG1190 ILE1191 ARG1192 TYR1193 ASN1194 ARG1195 ARG1196 SER1197 ALA1198 PRO1199 ASP1200 PRO1201 SER1202 VAL1203 ILE1204 THR1205 LEU1206 GLU1207 ASN1208 SER1209 TRP1210 GLY1211 ARG1212 LEU1213 SER1214 THR1215 ALA1216 ILE1217 GLN1218 GLU1219 SER1220 ASN1221 GLN1222 GLY1223 ALA1224 PHE1225 ALA1226 SER1227 PRO1228 ILE1229 GLN1230 LEU1231 GLN1232 ARG1233 ARG1234 ASN1235 GLY1236 SER1237 LYS1238 PHE1239 ASN1240 VAL1241 TYR1242 ASP1243 VAL1244 SER1245 ILE1246 LEU1247 ILE1248 PRO1249 ILE1250 ILE1251 ALA1252 LEU1253 MET1254 VAL1255 TYR1256 ARG1257 CYS1258 ALA1259 PRO1260 PRO1261 PRO1262
Unit 2 ALA2001 ASP2002 VAL2003 CYS2004 MET2005 ASP2006 PRO2007 GLU2008 PRO2009 ILE2010 VAL2011 ARG2012 ILE2013 VAL2014 GLY2015 ARG2016 ASN2017 GLY2018 LEU2019 CYS2020 VAL2021 ASP2022 VAL2023 THR2024 GLY2025 GLU2026 GLU2027 PHE2028 PHE2029 ASP2030 GLY2031 ASN2032 PRO2033 ILE2034 GLN2035 LEU2036 TRP2037 PRO2038 CYS2039 LYS2040 SER2041 ASN2042 THR2043 ASP2044 TRP2045 ASN2046 GLN2047 LEU2048 TRP2049 THR2050 LEU2051 ARG2052 LYS2053 ASP2054 SER2055 THR2056 ILE2057 ARG2058 SER2059 ASN2060 GLY2061 LYS2062 CYS2063 LEU2064 THR2065 ILE2066 SER2067 LYS2068 SER2069 SER2070 PRO2071 ARG2072 GLN2073 GLN2074 VAL2075 VAL2076 ILE2077 TYR2078 ASN2079 CYS2080 SER2081 THR2082 ALA2083 THR2084 VAL2085 GLY2086 ALA2087 THR2088 ARG2089 TRP2090 GLN2091 ILE2092 TRP2093 ASP2094 ASN2095 ARG2096 THR2097 ILE2098 ILE2099 ASN2100 PRO2101 ARG2102 SER2103 GLY2104 LEU2105 VAL2106 LEU2107 ALA2108 ALA2109 THR2110 SER2111 GLY2112 ASN2113 SER2114 GLY2115 THR2116 LYS2117 LEU2118 THR2119 VAL2120 GLN2121 THR2122 ASN2123 ILE2124 TYR2125 ALA2126 VAL2127 SER2128 GLN2129 GLY2130 TRP2131 LEU2132 PRO2133 THR2134 ASN2135 ASN2136 THR2137 GLN2138 PRO2139 PHE2140 VAL2141 THR2142 THR2143 ILE2144 VAL2145 GLY2146 LEU2147 TYR2148 GLY2149 MET2150 CYS2151 LEU2152 GLN2153 ALA2154 ASN2155 SER2156 GLY2157 LYS2158 VAL2159 TRP2160 LEU2161 GLU2162 ASP2163 CYS2164 THR2165 SER2166 GLU2167 LYS2168 ALA2169 GLU2170 GLN2171 GLN2172 TRP2173 ALA2174 LEU2175 TYR2176 ALA2177 ASP2178 GLY2179 SER2180 ILE2181 ARG2182 PRO2183 GLN2184 GLN2185 ASN2186 ARG2187 ASP2188 ASN2189 CYS2190 LEU2191 THR2192 THR2193 ASP2194 ALA2195 ASN2196 ILE2197 LYS2198 GLY2199 THR2200 VAL2201 VAL2202 LYS2203 ILE2204 LEU2205 SER2206 CYS2207 GLY2208 PRO2209 ALA2210 SER2211 SER2212 GLY2213 GLN2214 ARG2215 TRP2216 MET2217 PHE2218 LYS2219 ASN2220 ASP2221 GLY2222 THR2223 ILE2224 LEU2225 ASN2226 LEU2227 TYR2228 ASN2229 GLY2230 LEU2231 VAL2232 LEU2233 ASP2234 VAL2235 ARG2236 ARG2237 SER2238 ASP2239 PRO2240 SER2241 LEU2242 LYS2243 GLN2244 ILE2245 ILE2246 VAL2247 HIS2248 PRO2249 PHE2250 HIS2251 GLY2252 ASN2253 LEU2254 ASN2255 GLN2256 ILE2257 TRP2258 LEU2259 PRO2260 LEU2261 PHE2262
Unit 3 PRO1003 LYS1004 GLN1005 TYR1006 PRO1007 ILE1008 ILE1009 ASN1010 PHE1011 THR1012 THR1013 ALA1014 ASP1015 ALA1016 THR1017 VAL1018 GLU1019 SER1020 TYR1021 THR1022 ASN1023 PHE1024 ILE1025 ARG1026 ALA1027 VAL1028 ARG1029 SER1030 HIS1031 LEU1032 THR1033 THR1034 GLY1035 ALA1036 ASP1037 VAL1038 ARG1039 HIS1040 GLU1041 ILE1042 PRO1043 VAL1044 LEU1045 PRO1046 ASN1047 ARG1048 VAL1049 GLY1050 LEU1051 PRO1052 ILE1053 SER1054 GLN1055 ARG1056 PHE1057 ILE1058 LEU1059 VAL1060 GLU1061 LEU1062 SER1063 ASN1064 HIS1065 ALA1066 GLU1067 LEU1068 SER1069 VAL1070 THR1071 LEU1072 ALA1073 LEU1074 ASP1075 VAL1076 THR1077 ASN1078 ALA1079 TYR1080 VAL1081 VAL1082 GLY1083 CYS1084 ARG1085 ALA1086 GLY1087 ASN1088 SER1089 ALA1090 TYR1091 PHE1092 PHE1093 HIS1094 PRO1095 ASP1096 ASN1097 GLN1098 GLU1099 ASP1100 ALA1101 GLU1102 ALA1103 ILE1104 THR1105 HIS1106 LEU1107 PHE1108 THR1109 ASP1110 VAL1111 GLN1112 ASN1113 SER1114 PHE1115 THR1116 PHE1117 ALA1118 PHE1119 GLY1120 GLY1121 ASN1122 TYR1123 ASP1124 ARG1125 LEU1126 GLU1127 GLN1128 LEU1129 GLY1130 GLY1131 LEU1132 ARG1133 GLU1134 ASN1135 ILE1136 GLU1137 LEU1138 GLY1139 THR1140 GLY1141 PRO1142 LEU1143 GLU1144 ASP1145 ALA1146 ILE1147 SER1148 ALA1149 LEU1150 TYR1151 TYR1152 TYR1153 SER1154 THR1155 CYS1156 GLY1157 THR1158 GLN1159 ILE1160 PRO1161 THR1162 LEU1163 ALA1164 ARG1165 SER1166 PHE1167 MET1168 VAL1169 CYS1170 ILE1171 GLN1172 MET1173 ILE1174 SER1175 GLU1176 ALA1177 ALA1178 ARG1179 PHE1180 GLN1181 TYR1182 ILE1183 GLU1184 GLY1185 GLU1186 MET1187 ARG1188 THR1189 ARG1190 ILE1191 ARG1192 TYR1193 ASN1194 ARG1195 ARG1196 SER1197 ALA1198 PRO1199 ASP1200 PRO1201 SER1202 VAL1203 ILE1204 THR1205 LEU1206 GLU1207 ASN1208 SER1209 TRP1210 GLY1211 ARG1212 LEU1213 SER1214 THR1215 ALA1216 ILE1217 GLN1218 GLU1219 SER1220 ASN1221 GLN1222 GLY1223 ALA1224 PHE1225 ALA1226 SER1227 PRO1228 ILE1229 GLN1230 LEU1231 GLN1232 ARG1233 ARG1234 ASN1235 GLY1236 SER1237 LYS1238 PHE1239 ASN1240 VAL1241 TYR1242 ASP1243 VAL1244 SER1245 ILE1246 LEU1247 ILE1248 PRO1249 ILE1250 ILE1251 ALA1252 LEU1253 MET1254 VAL1255 TYR1256 ARG1257 CYS1258 ALA1259 PRO1260 PRO1261 PRO1262
Unit 4 ALA2001 ASP2002 VAL2003 CYS2004 MET2005 ASP2006 PRO2007 GLU2008 PRO2009 ILE2010 VAL2011 ARG2012 ILE2013 VAL2014 GLY2015 ARG2016 ASN2017 GLY2018 LEU2019 CYS2020 VAL2021 ASP2022 VAL2023 THR2024 GLY2025 GLU2026 GLU2027 PHE2028 PHE2029 ASP2030 GLY2031 ASN2032 PRO2033 ILE2034 GLN2035 LEU2036 TRP2037 PRO2038 CYS2039 LYS2040 SER2041 ASN2042 THR2043 ASP2044 TRP2045 ASN2046 GLN2047 LEU2048 TRP2049 THR2050 LEU2051 ARG2052 LYS2053 ASP2054 SER2055 THR2056 ILE2057 ARG2058 SER2059 ASN2060 GLY2061 LYS2062 CYS2063 LEU2064 THR2065 ILE2066 SER2067 LYS2068 SER2069 SER2070 PRO2071 ARG2072 GLN2073 GLN2074 VAL2075 VAL2076 ILE2077 TYR2078 ASN2079 CYS2080 SER2081 THR2082 ALA2083 THR2084 VAL2085 GLY2086 ALA2087 THR2088 ARG2089 TRP2090 GLN2091 ILE2092 TRP2093 ASP2094 ASN2095 ARG2096 THR2097 ILE2098 ILE2099 ASN2100 PRO2101 ARG2102 SER2103 GLY2104 LEU2105 VAL2106 LEU2107 ALA2108 ALA2109 THR2110 SER2111 GLY2112 ASN2113 SER2114 GLY2115 THR2116 LYS2117 LEU2118 THR2119 VAL2120 GLN2121 THR2122 ASN2123 ILE2124 TYR2125 ALA2126 VAL2127 SER2128 GLN2129 GLY2130 TRP2131 LEU2132 PRO2133 THR2134 ASN2135 ASN2136 THR2137 GLN2138 PRO2139 PHE2140 VAL2141 THR2142 THR2143 ILE2144 VAL2145 GLY2146 LEU2147 TYR2148 GLY2149 MET2150 CYS2151 LEU2152 GLN2153 ALA2154 ASN2155 SER2156 GLY2157 LYS2158 VAL2159 TRP2160 LEU2161 GLU2162 ASP2163 CYS2164 THR2165 SER2166 GLU2167 LYS2168 ALA2169 GLU2170 GLN2171 GLN2172 TRP2173 ALA2174 LEU2175 TYR2176 ALA2177 ASP2178 GLY2179 SER2180 ILE2181 ARG2182 PRO2183 GLN2184 GLN2185 ASN2186 ARG2187 ASP2188 ASN2189 CYS2190 LEU2191 THR2192 THR2193 ASP2194 ALA2195 ASN2196 ILE2197 LYS2198 GLY2199 THR2200 VAL2201 VAL2202 LYS2203 ILE2204 LEU2205 SER2206 CYS2207 GLY2208 PRO2209 ALA2210 SER2211 SER2212 GLY2213 GLN2214 ARG2215 TRP2216 MET2217 PHE2218 LYS2219 ASN2220 ASP2221 GLY2222 THR2223 ILE2224 LEU2225 ASN2226 LEU2227 TYR2228 ASN2229 GLY2230 LEU2231 VAL2232 LEU2233 ASP2234 VAL2235 ARG2236 ARG2237 SER2238 ASP2239 PRO2240 SER2241 LEU2242 LYS2243 GLN2244 ILE2245 ILE2246 VAL2247 HIS2248 PRO2249 PHE2250 HIS2251 GLY2252 ASN2253 LEU2254 ASN2255 GLN2256 ILE2257 TRP2258 LEU2259 PRO2260 LEU2261 PHE2262
Ligands
Unit 5 GAL5001 SO46001 SO46004 SO46005
Unit 6 GAL5002 GAL5003 GAL5004 GAL5005 GAL5006 SO46002 SO46003 SO46006
Unit 7 GAL5501 SO46501 SO46504
Unit 8 GAL5502 GAL5503 GAL5504 GAL5505 SO46502 SO46503
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany