Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title COMPUTER MODELING FROM SOLUTION DATA OF SPINACH CHLOROPLAST AND OF XENOPUS LAEVIS SOMATIC AND OOCYTE 5 S RRNAS
Keywords RNA
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1RRN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 118 2521 0
total       118 2521 0

Nucleic acids
Unit 1 G1 C2 C3 U4 A5 C6 G7 G8 C9 C10 A11 C12 A13 C14 C15 A16 C17 C18 C19 U20 G21 A22 A23 A24 G25 U26 G27 C28 C29 U30 G31 A32 U33 C34 U35 C36 G37 U38 C39 U40 G41 A42 U43 C44 U45 C46 A47 G48 A49 A50 G51 C52 G53 A54 U55 A56 C57 A58 G59 G60 G61 U62 C63 G64 G65 G66 C67 C68 U69 G70 G71 U72 U73 A74 G75 U76 A77 C78 C79 U80 G81 G82 A83 U84 G85 G86 G87 A88 G89 A90 C91 C92 G93 C94 C95 U96 G97 G98 G99 A100 A101 U102 A103 C104 C105 A106 G107 G108 U109 G110 U111 C112 G113 U114 A115 G116 G117 C118

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany