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| Title | PBP2X FROM STREPTOCOCCUS PNEUMONIAE STRAIN 5259 WITH REDUCED SUSCEPTIBILITY TO BETA-LACTAM ANTIBIOTICS | |
| Keywords | PENICILLIN-BINDING PROTEIN, TRANSPEPTIDASE, ANTIBIOTIC RESISTANCE, PEPTIDOGLYCAN SYNTHESIS, CELL WALL, TRANSMEMBRANE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 1RP5 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | PENICILLIN-BINDING PROTEIN 2X | A | 687 | 5128 | 0 |
| 2 | Protein | PENICILLIN-BINDING PROTEIN 2X | B | 680 | 5132 | 0 |
| 3 | Ligand | PENICILLIN-BINDING PROTEIN 2X | A | 1 | 0 | 5 |
| 4 | Ligand | PENICILLIN-BINDING PROTEIN 2X | B | 1 | 0 | 5 |
| 5 | Water | 45 | 0 | 45 | ||
| total | 1414 | 10260 | 55 |
| Unit 1 | LYS64 VAL65 HIS66 GLN67 THR68 THR69 ARG70 THR71 VAL72 PRO73 ALA74 LYS75 ARG76 GLY77 THR78 ILE79 TYR80 ASP81 ARG82 ASN83 GLY84 VAL85 PRO86 ILE87 ALA88 GLU89 ASP90 ALA91 THR92 SER93 TYR94 ASN95 VAL96 TYR97 ALA98 VAL99 ILE100 ASP101 GLU102 ASN103 TYR104 LYS105 SER106 ALA107 THR108 GLY109 LYS110 ILE111 LEU112 TYR113 VAL114 GLU115 LYS116 THR117 GLN118 PHE119 ASN120 LYS121 VAL122 ALA123 GLU124 VAL125 PHE126 HIS127 LYS128 TYR129 LEU130 ASP131 MET132 GLU133 GLU134 SER135 TYR136 VAL137 ARG138 GLU139 GLN140 LEU141 SER142 GLN143 PRO144 ASN145 LEU146 LYS147 GLN148 VAL149 SER150 PHE151 GLY152 ALA153 LYS154 GLY155 ASN156 GLY157 ILE158 THR159 TYR160 ALA161 ASN162 MET163 MET164 SER165 ILE166 LYS167 LYS168 GLU169 LEU170 GLU171 THR172 ALA173 GLU174 VAL175 LYS176 GLY177 ILE178 ASP179 PHE180 THR181 THR182 SER183 PRO184 ASN185 ARG186 SER187 TYR188 PRO189 ASN190 GLY191 GLN192 PHE193 ALA194 SER195 SER196 PHE197 ILE198 GLY199 LEU200 ALA201 GLN202 LEU203 HIS204 GLU205 ASN206 GLU207 ASP208 GLY209 SER210 LYS211 SER212 LEU213 LEU214 GLY215 THR216 SER217 GLY218 MET219 GLU220 SER221 SER222 LEU223 ASN224 SER225 ILE226 LEU227 ALA228 GLY229 THR230 ASP231 GLY232 ILE233 ILE234 THR235 TYR236 GLU237 LYS238 ASP239 ARG240 LEU241 GLY242 ASN243 ILE244 VAL245 PRO246 GLY247 THR248 GLU249 GLN250 VAL251 SER252 GLN253 GLN254 THR255 VAL256 ASP257 GLY258 LYS259 ASP260 VAL261 TYR262 THR263 THR264 ILE265 SER266 SER267 PRO268 LEU269 GLN270 SER271 PHE272 MET273 GLU274 THR275 GLN276 MET277 ASP278 ALA279 PHE280 GLN281 GLU282 LYS283 VAL284 LYS285 GLY286 LYS287 TYR288 MET289 THR290 ALA291 THR292 LEU293 VAL294 SER295 ALA296 LYS297 THR298 GLY299 GLU300 ILE301 LEU302 ALA303 THR304 THR305 GLN306 ARG307 PRO308 THR309 PHE310 ASP311 ALA312 ASP313 THR314 LYS315 GLU316 GLY317 ILE318 THR319 GLU320 ASP321 PHE322 VAL323 TRP324 ARG325 ASP326 ILE327 LEU328 TYR329 GLN330 SER331 ASN332 TYR333 GLU334 PRO335 GLY336 SER337 THR338 MET339 LYS340 VAL341 MET342 MET343 LEU344 ALA345 ALA346 ALA347 ILE348 ASP349 ASN350 ASN351 THR352 PHE353 PRO354 GLY355 GLY356 GLU357 VAL358 PHE359 ASN360 SER361 SER362 GLU363 LEU364 LYS365 ILE366 ALA367 ASP368 ALA369 THR370 ILE371 ARG372 ASP373 TRP374 ASP375 VAL376 ASN377 GLU378 GLY379 LEU380 THR381 GLY382 GLY383 ARG384 MET385 MET386 THR387 PHE388 SER389 GLN390 GLY391 PHE392 ALA393 HIS394 SER395 SER396 ASN397 VAL398 GLY399 MET400 THR401 LEU402 LEU403 GLU404 GLN405 LYS406 MET407 GLY408 ASP409 ALA410 THR411 TRP412 LEU413 ASP414 TYR415 LEU416 ASN417 ARG418 PHE419 LYS420 PHE421 GLY422 VAL423 PRO424 THR425 ARG426 PHE427 GLY428 LEU429 THR430 ASP431 GLU432 TYR433 ALA434 GLY435 GLN436 LEU437 PRO438 ALA439 ASP440 ASN441 ILE442 VAL443 ASN444 ILE445 ALA446 MET447 SER448 ALA449 PHE450 GLY451 GLN452 GLY453 ILE454 SER455 VAL456 THR457 GLN458 THR459 GLN460 MET461 LEU462 ARG463 ALA464 PHE465 THR466 ALA467 ILE468 ALA469 ASN470 ASP471 GLY472 VAL473 MET474 LEU475 GLU476 PRO477 LYS478 PHE479 ILE480 SER481 ALA482 LEU483 TYR484 ASP485 PRO486 ASN487 ASP488 GLN489 SER490 VAL491 ARG492 LYS493 SER494 GLN495 LYS496 GLU497 ILE498 VAL499 GLY500 ASN501 PRO502 VAL503 SER504 LYS505 GLU506 ALA507 ALA508 SER509 VAL510 THR511 ARG512 ASP513 HIS514 MET515 VAL516 MET517 VAL518 GLY519 THR520 ASP521 PRO522 THR523 TYR524 GLY525 THR526 MET527 TYR528 ASN529 HIS530 SER531 THR532 GLY533 LYS534 ALA535 THR536 VAL537 ASN538 VAL539 PRO540 GLY541 GLN542 ASN543 VAL544 ALA545 LEU546 LYS547 SER548 GLY549 THR550 ALA551 GLU552 ILE553 ALA554 ASP555 GLU556 LYS557 ASN558 GLY559 GLY560 TYR561 LEU562 THR563 GLY564 SER565 THR566 ASN567 ASN568 ILE569 PHE570 SER571 VAL572 VAL573 SER574 MET575 HIS576 PRO577 ALA578 GLU579 ASN580 PRO581 ASP582 PHE583 ILE584 LEU585 TYR586 VAL587 THR588 VAL589 GLN590 GLN591 PRO592 GLU593 HIS594 TYR595 SER596 GLY597 ILE598 GLN599 LEU600 GLY601 GLU602 PHE603 ALA604 ASN605 PRO606 ILE607 LEU608 GLU609 ARG610 ALA611 SER612 ALA613 MET614 LYS615 GLU616 SER617 LEU618 ASN619 LEU620 GLN621 THR622 THR623 ALA624 LYS625 ALA626 LEU627 GLU628 GLN629 VAL630 SER631 GLN632 GLN633 SER634 PRO635 TYR636 PRO637 MET638 PRO639 SER640 VAL641 LYS642 ASP643 ILE644 SER645 PRO646 GLY647 ASP648 LEU649 ALA650 GLU651 GLU652 LEU653 ARG654 ARG655 ASN656 LEU657 VAL658 GLN659 PRO660 ILE661 VAL662 VAL663 GLY664 THR665 GLY666 THR667 LYS668 ILE669 LYS670 ASN671 SER672 SER673 ALA674 GLU675 GLU676 GLY677 LYS678 ASN679 LEU680 ALA681 PRO682 ASN683 GLN684 GLN685 VAL686 LEU687 ILE688 LEU689 SER690 ASP691 LYS692 ALA693 GLU694 GLU695 VAL696 PRO697 ASP698 MET699 TYR700 GLY701 TRP702 THR703 LYS704 GLU705 THR706 ALA707 GLU708 THR709 PHE710 ALA711 LYS712 TRP713 LEU714 ASN715 ILE716 GLU717 LEU718 GLU719 PHE720 GLU721 GLY722 SER723 GLY724 SER725 THR726 VAL727 GLN728 LYS729 GLN730 ASP731 VAL732 ARG733 ALA734 ASN735 THR736 ALA737 ILE738 LYS739 ASP740 ILE741 LYS742 LYS743 ILE744 LYS745 LEU746 THR747 LEU748 GLY749 ASP750 |
| Unit 2 | LYS64 VAL65 HIS66 GLN67 THR68 THR69 ARG70 THR71 VAL72 PRO73 ALA74 LYS75 ARG76 GLY77 THR78 ILE79 TYR80 ASP81 ARG82 ASN83 GLY84 VAL85 PRO86 ILE87 ALA88 GLU89 ASP90 ALA91 THR92 SER93 TYR94 ASN95 VAL96 TYR97 ALA98 VAL99 ILE100 ASP101 GLU102 ASN103 TYR104 LYS105 SER106 ALA107 THR108 GLY109 LYS110 ILE111 LEU112 TYR113 VAL114 GLU115 LYS116 THR117 GLN118 PHE119 ASN120 LYS121 VAL122 ALA123 GLU124 VAL125 PHE126 HIS127 LYS128 TYR129 LEU130 ASP131 MET132 GLU133 GLU134 SER135 TYR136 VAL137 ARG138 GLU139 GLN140 LEU141 SER142 GLN143 PRO144 ASN145 LEU146 LYS147 GLN148 VAL149 SER150 PHE151 GLY152 ALA153 LYS154 GLY155 ASN156 GLY157 ILE158 THR159 TYR160 ALA161 ASN162 MET163 MET164 SER165 ILE166 LYS167 LYS168 GLU169 LEU170 GLU171 THR172 ALA173 GLU174 VAL175 LYS176 GLY177 ILE178 ASP179 PHE180 THR181 THR182 SER183 PRO184 ASN185 ARG186 SER187 TYR188 PRO189 ASN190 GLY191 GLN192 PHE193 ALA194 SER195 SER196 PHE197 ILE198 GLY199 LEU200 ALA201 GLN202 LEU203 HIS204 GLU205 ASN206 GLU207 ASP208 GLY209 SER210 LYS211 SER212 LEU213 LEU214 GLY215 THR216 SER217 GLY218 MET219 GLU220 SER221 SER222 LEU223 ASN224 SER225 ILE226 LEU227 ALA228 GLY229 THR230 ASP231 GLY232 ILE233 ILE234 THR235 TYR236 GLU237 LYS238 ASP239 ARG240 LEU241 GLY242 ASN243 ILE244 VAL245 PRO246 GLY247 THR248 GLU249 GLN250 VAL251 SER252 GLN253 GLN254 THR255 VAL256 ASP257 GLY258 LYS259 ASP260 VAL261 TYR262 THR263 THR264 ILE265 SER266 SER267 PRO268 LEU269 GLN270 SER271 PHE272 MET273 GLU274 THR275 GLN276 MET277 ASP278 ALA279 PHE280 GLN281 GLU282 LYS283 VAL284 LYS285 GLY286 LYS287 TYR288 MET289 THR290 ALA291 THR292 LEU293 VAL294 SER295 ALA296 LYS297 THR298 GLY299 GLU300 ILE301 LEU302 ALA303 THR304 THR305 GLN306 ARG307 PRO308 THR309 PHE310 ASP311 ALA312 ASP313 THR314 LYS315 GLU316 GLY317 ILE318 THR319 GLU320 ASP321 PHE322 VAL323 TRP324 ARG325 ASP326 ILE327 LEU328 TYR329 GLN330 SER331 ASN332 TYR333 GLU334 PRO335 GLY336 SER337 THR338 MET339 LYS340 VAL341 MET342 MET343 LEU344 ALA345 ALA346 ALA347 ILE348 ASP349 ASN350 ASN351 THR352 PHE353 PRO354 GLY355 GLY356 GLU357 VAL358 PHE359 ASN360 SER361 SER362 GLU363 LEU364 LYS365 ILE366 ALA367 ASP368 ALA369 THR370 ILE371 ARG372 ASP373 TRP374 ASP375 VAL376 ARG384 MET385 MET386 THR387 PHE388 SER389 GLN390 GLY391 PHE392 ALA393 HIS394 SER395 SER396 ASN397 VAL398 GLY399 MET400 THR401 LEU402 LEU403 GLU404 GLN405 LYS406 MET407 GLY408 ASP409 ALA410 THR411 TRP412 LEU413 ASP414 TYR415 LEU416 ASN417 ARG418 PHE419 LYS420 PHE421 GLY422 VAL423 PRO424 THR425 ARG426 PHE427 GLY428 LEU429 THR430 ASP431 GLU432 TYR433 ALA434 GLY435 GLN436 LEU437 PRO438 ALA439 ASP440 ASN441 ILE442 VAL443 ASN444 ILE445 ALA446 MET447 SER448 ALA449 PHE450 GLY451 GLN452 GLY453 ILE454 SER455 VAL456 THR457 GLN458 THR459 GLN460 MET461 LEU462 ARG463 ALA464 PHE465 THR466 ALA467 ILE468 ALA469 ASN470 ASP471 GLY472 VAL473 MET474 LEU475 GLU476 PRO477 LYS478 PHE479 ILE480 SER481 ALA482 LEU483 TYR484 ASP485 PRO486 ASN487 ASP488 GLN489 SER490 VAL491 ARG492 LYS493 SER494 GLN495 LYS496 GLU497 ILE498 VAL499 GLY500 ASN501 PRO502 VAL503 SER504 LYS505 GLU506 ALA507 ALA508 SER509 VAL510 THR511 ARG512 ASP513 HIS514 MET515 VAL516 MET517 VAL518 GLY519 THR520 ASP521 PRO522 THR523 TYR524 GLY525 THR526 MET527 TYR528 ASN529 HIS530 SER531 THR532 GLY533 LYS534 ALA535 THR536 VAL537 ASN538 VAL539 PRO540 GLY541 GLN542 ASN543 VAL544 ALA545 LEU546 LYS547 SER548 GLY549 THR550 ALA551 GLU552 ILE553 ALA554 ASP555 GLU556 LYS557 ASN558 GLY559 GLY560 TYR561 LEU562 THR563 GLY564 SER565 THR566 ASN567 ASN568 ILE569 PHE570 SER571 VAL572 VAL573 SER574 MET575 HIS576 PRO577 ALA578 GLU579 ASN580 PRO581 ASP582 PHE583 ILE584 LEU585 TYR586 VAL587 THR588 VAL589 GLN590 GLN591 PRO592 GLU593 HIS594 TYR595 SER596 GLY597 ILE598 GLN599 LEU600 GLY601 GLU602 PHE603 ALA604 ASN605 PRO606 ILE607 LEU608 GLU609 ARG610 ALA611 SER612 ALA613 MET614 LYS615 GLU616 SER617 LEU618 ASN619 LEU620 GLN621 THR622 THR623 ALA624 LYS625 ALA626 LEU627 GLU628 GLN629 VAL630 SER631 GLN632 GLN633 SER634 PRO635 TYR636 PRO637 MET638 PRO639 SER640 VAL641 LYS642 ASP643 ILE644 SER645 PRO646 GLY647 ASP648 LEU649 ALA650 GLU651 GLU652 LEU653 ARG654 ARG655 ASN656 LEU657 VAL658 GLN659 PRO660 ILE661 VAL662 VAL663 GLY664 THR665 GLY666 THR667 LYS668 ILE669 LYS670 ASN671 SER672 SER673 ALA674 GLU675 GLU676 GLY677 LYS678 ASN679 LEU680 ALA681 PRO682 ASN683 GLN684 GLN685 VAL686 LEU687 ILE688 LEU689 SER690 ASP691 LYS692 ALA693 GLU694 GLU695 VAL696 PRO697 ASP698 MET699 TYR700 GLY701 TRP702 THR703 LYS704 GLU705 THR706 ALA707 GLU708 THR709 PHE710 ALA711 LYS712 TRP713 LEU714 ASN715 ILE716 GLU717 LEU718 GLU719 PHE720 GLU721 GLY722 SER723 GLY724 SER725 THR726 VAL727 GLN728 LYS729 GLN730 ASP731 VAL732 ARG733 ALA734 ASN735 THR736 ALA737 ILE738 LYS739 ASP740 ILE741 LYS742 LYS743 ILE744 LYS745 LEU746 THR747 LEU748 GLY749 ASP750 |
| Unit 3 | SO4751 |
| Unit 4 | SO4751 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |