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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF VANX
Keywords VANX, E.FAECIUM, DIPEPTIDASE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1R44     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  A 202 1651 0
2  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  B 202 1651 0
3  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  C 202 1651 0
4  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  D 202 1651 0
5  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  E 202 1651 0
6  Protein   D-ALANYL-D-ALANINE DIPEPTIDASE  F 202 1651 0
7  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  A 1 0 1
8  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  B 1 0 1
9  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  C 1 0 1
10  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  D 1 0 1
11  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  E 1 0 1
12  Ligand   D-ALANYL-D-ALANINE DIPEPTIDASE  F 1 0 1
13 Water     12 0 12
total       1230 9906 18

Proteins
Unit 1 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202
Unit 2 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202
Unit 3 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202
Unit 4 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202
Unit 5 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202
Unit 6 MET1 GLU2 ILE3 GLY4 PHE5 THR6 PHE7 LEU8 ASP9 GLU10 ILE11 VAL12 HIS13 GLY14 VAL15 ARG16 TRP17 ASP18 ALA19 LYS20 TYR21 ALA22 THR23 TRP24 ASP25 ASN26 PHE27 THR28 GLY29 LYS30 PRO31 VAL32 ASP33 GLY34 TYR35 GLU36 VAL37 ASN38 ARG39 ILE40 VAL41 GLY42 THR43 TYR44 GLU45 LEU46 ALA47 GLU48 SER49 LEU50 LEU51 LYS52 ALA53 LYS54 GLU55 LEU56 ALA57 ALA58 THR59 GLN60 GLY61 TYR62 GLY63 LEU64 LEU65 LEU66 TRP67 ASP68 GLY69 TYR70 ARG71 PRO72 LYS73 ARG74 ALA75 VAL76 ASN77 CYS78 PHE79 MET80 GLN81 TRP82 ALA83 ALA84 GLN85 PRO86 GLU87 ASN88 ASN89 LEU90 THR91 LYS92 GLU93 SER94 TYR95 TYR96 PRO97 ASN98 ILE99 ASP100 ARG101 THR102 GLU103 MET104 ILE105 SER106 LYS107 GLY108 TYR109 VAL110 ALA111 SER112 LYS113 SER114 SER115 HIS116 SER117 ARG118 GLY119 SER120 ALA121 ILE122 ASP123 LEU124 THR125 LEU126 TYR127 ARG128 LEU129 ASP130 THR131 GLY132 GLU133 LEU134 VAL135 PRO136 MET137 GLY138 SER139 ARG140 PHE141 ASP142 PHE143 MET144 ASP145 GLU146 ARG147 SER148 HIS149 HIS150 ALA151 ALA152 ASN153 GLY154 ILE155 SER156 CYS157 ASN158 GLU159 ALA160 GLN161 ASN162 ARG163 ARG164 ARG165 LEU166 ARG167 SER168 ILE169 MET170 GLU171 ASN172 SER173 GLY174 PHE175 GLU176 ALA177 TYR178 SER179 LEU180 GLU181 TRP182 TRP183 HIS184 TYR185 VAL186 LEU187 ARG188 ASP189 GLU190 PRO191 TYR192 PRO193 ASN194 SER195 TYR196 PHE197 ASP198 PHE199 PRO200 VAL201 LYS202

Ligands
Unit 7 ZN203
Unit 8 ZN203
Unit 9 ZN203
Unit 10 ZN203
Unit 11 ZN203
Unit 12 ZN203

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany