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Sequence, Chains, Asymmetric and Biological Units

Title AMIDE RECEPTOR OF THE AMIDASE OPERON OF PSEUDOMONAS AERUGINO COMPLEXED WITH THE NEGATIVE REGULATOR AMIR.
Keywords BINDING PROTEIN, GENE REGULATOR, RECEPTOR
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1QO0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AMIC  A 373 2943 0
2  Protein   AMIC  B 374 2944 0
3  Protein   AMIR  D 189 1440 0
4  Protein   AMIR  E 194 1471 0
5  Ligand   AMIC  A 1 0 6
6  Ligand   AMIC  B 1 0 6
7 Water     851 0 851
total       1983 8798 863

Proteins
Unit 1 ARG7 PRO8 LEU9 ILE10 GLY11 LEU12 LEU13 PHE14 SER15 GLU16 THR17 GLY18 VAL19 THR20 ALA21 ASP22 ILE23 GLU24 ARG25 SER26 GLN27 ARG28 TYR29 GLY30 ALA31 LEU32 LEU33 ALA34 VAL35 GLU36 GLN37 LEU38 ASN39 ARG40 GLU41 GLY42 GLY43 VAL44 GLY45 GLY46 ARG47 PRO48 ILE49 GLU50 THR51 LEU52 SER53 GLN54 ASP55 PRO56 GLY57 GLY58 ASP59 PRO60 ASP61 ARG62 TYR63 ARG64 LEU65 CYS66 ALA67 GLU68 ASP69 PHE70 ILE71 ARG72 ASN73 ARG74 GLY75 VAL76 ARG77 PHE78 LEU79 VAL80 GLY81 CYS82 TYR83 MET84 SER85 HIS86 THR87 ARG88 LYS89 ALA90 VAL91 MET92 PRO93 VAL94 VAL95 GLU96 ARG97 ALA98 ASP99 ALA100 LEU101 LEU102 CYS103 TYR104 PRO105 THR106 PRO107 TYR108 GLU109 GLY110 PHE111 GLU112 TYR113 SER114 PRO115 ASN116 ILE117 VAL118 TYR119 GLY120 GLY121 PRO122 ALA123 PRO124 ASN125 GLN126 ASN127 SER128 ALA129 PRO130 LEU131 ALA132 ALA133 TYR134 LEU135 ILE136 ARG137 HIS138 TYR139 GLY140 GLU141 ARG142 VAL143 VAL144 PHE145 ILE146 GLY147 SER148 ASP149 TYR150 ILE151 TYR152 PRO153 ARG154 GLU155 SER156 ASN157 HIS158 VAL159 MET160 ARG161 HIS162 LEU163 TYR164 ARG165 GLN166 HIS167 GLY168 GLY169 THR170 VAL171 LEU172 GLU173 GLU174 ILE175 TYR176 ILE177 PRO178 LEU179 TYR180 PRO181 SER182 ASP183 ASP184 ASP185 LEU186 GLN187 ARG188 ALA189 VAL190 GLU191 ARG192 ILE193 TYR194 GLN195 ALA196 ARG197 ALA198 ASP199 VAL200 VAL201 PHE202 SER203 THR204 VAL205 VAL206 GLY207 THR208 GLY209 THR210 ALA211 GLU212 LEU213 TYR214 ARG215 ALA216 ILE217 ALA218 ARG219 ARG220 TYR221 GLY222 ASP223 GLY224 ARG225 ARG226 PRO227 PRO228 ILE229 ALA230 SER231 LEU232 THR233 THR234 SER235 GLU236 ALA237 GLU238 VAL239 ALA240 LYS241 MET242 GLU243 SER244 ASP245 VAL246 ALA247 GLU248 GLY249 GLN250 VAL251 VAL252 VAL253 ALA254 PRO255 TYR256 PHE257 SER258 SER259 ILE260 ASP261 THR262 PRO263 ALA264 SER265 ARG266 ALA267 PHE268 VAL269 GLN270 ALA271 CYS272 HIS273 GLY274 PHE275 PHE276 PRO277 GLU278 ASN279 ALA280 THR281 ILE282 THR283 ALA284 TRP285 ALA286 GLU287 ALA288 ALA289 TYR290 TRP291 GLN292 THR293 LEU294 LEU295 LEU296 GLY297 ARG298 ALA299 ALA300 GLN301 ALA302 ALA303 GLY304 ASN305 TRP306 ARG307 VAL308 GLU309 ASP310 VAL311 GLN312 ARG313 HIS314 LEU315 TYR316 ASP317 ILE318 ASP319 ILE320 ASP321 ALA322 PRO323 GLN324 GLY325 PRO326 VAL327 ARG328 VAL329 GLU330 ARG331 GLN332 ASN333 ASN334 HIS335 SER336 ARG337 LEU338 SER339 SER340 ARG341 ILE342 ALA343 GLU344 ILE345 ASP346 ALA347 ARG348 GLY349 VAL350 PHE351 GLN352 VAL353 ARG354 TRP355 GLN356 SER357 PRO358 GLU359 PRO360 ILE361 ARG362 PRO363 ASP364 PRO365 TYR366 VAL367 VAL368 VAL369 HIS370 ASN371 LEU372 ASP373 ASP374 TRP375 SER376 ALA377 SER378 MET379
Unit 2 ARG7 PRO8 LEU9 ILE10 GLY11 LEU12 LEU13 PHE14 SER15 GLU16 THR17 GLY18 VAL19 THR20 ALA21 ASP22 ILE23 GLU24 ARG25 SER26 GLN27 ARG28 TYR29 GLY30 ALA31 LEU32 LEU33 ALA34 VAL35 GLU36 GLN37 LEU38 ASN39 ARG40 GLU41 GLY42 GLY43 VAL44 GLY45 GLY46 ARG47 PRO48 ILE49 GLU50 THR51 LEU52 SER53 GLN54 ASP55 PRO56 GLY57 GLY58 ASP59 PRO60 ASP61 ARG62 TYR63 ARG64 LEU65 CYS66 ALA67 GLU68 ASP69 PHE70 ILE71 ARG72 ASN73 ARG74 GLY75 VAL76 ARG77 PHE78 LEU79 VAL80 GLY81 CYS82 TYR83 MET84 SER85 HIS86 THR87 ARG88 LYS89 ALA90 VAL91 MET92 PRO93 VAL94 VAL95 GLU96 ARG97 ALA98 ASP99 ALA100 LEU101 LEU102 CYS103 TYR104 PRO105 THR106 PRO107 TYR108 GLU109 GLY110 PHE111 GLU112 TYR113 SER114 PRO115 ASN116 ILE117 VAL118 TYR119 GLY120 GLY121 PRO122 ALA123 PRO124 ASN125 GLN126 ASN127 SER128 ALA129 PRO130 LEU131 ALA132 ALA133 TYR134 LEU135 ILE136 ARG137 HIS138 TYR139 GLY140 GLU141 ARG142 VAL143 VAL144 PHE145 ILE146 GLY147 SER148 ASP149 TYR150 ILE151 TYR152 PRO153 ARG154 GLU155 SER156 ASN157 HIS158 VAL159 MET160 ARG161 HIS162 LEU163 TYR164 ARG165 GLN166 HIS167 GLY168 GLY169 THR170 VAL171 LEU172 GLU173 GLU174 ILE175 TYR176 ILE177 PRO178 LEU179 TYR180 PRO181 SER182 ASP183 ASP184 ASP185 LEU186 GLN187 ARG188 ALA189 VAL190 GLU191 ARG192 ILE193 TYR194 GLN195 ALA196 ARG197 ALA198 ASP199 VAL200 VAL201 PHE202 SER203 THR204 VAL205 VAL206 GLY207 THR208 GLY209 THR210 ALA211 GLU212 LEU213 TYR214 ARG215 ALA216 ILE217 ALA218 ARG219 ARG220 TYR221 GLY222 ASP223 GLY224 ARG225 ARG226 PRO227 PRO228 ILE229 ALA230 SER231 LEU232 THR233 THR234 SER235 GLU236 ALA237 GLU238 VAL239 ALA240 LYS241 MET242 GLU243 SER244 ASP245 VAL246 ALA247 GLU248 GLY249 GLN250 VAL251 VAL252 VAL253 ALA254 PRO255 TYR256 PHE257 SER258 SER259 ILE260 ASP261 THR262 PRO263 ALA264 SER265 ARG266 ALA267 PHE268 VAL269 GLN270 ALA271 CYS272 HIS273 GLY274 PHE275 PHE276 PRO277 GLU278 ASN279 ALA280 THR281 ILE282 THR283 ALA284 TRP285 ALA286 GLU287 ALA288 ALA289 TYR290 TRP291 GLN292 THR293 LEU294 LEU295 LEU296 GLY297 ARG298 ALA299 ALA300 GLN301 ALA302 ALA303 GLY304 ASN305 TRP306 ARG307 VAL308 GLU309 ASP310 VAL311 GLN312 ARG313 HIS314 LEU315 TYR316 ASP317 ILE318 ASP319 ILE320 ASP321 ALA322 PRO323 GLN324 GLY325 PRO326 VAL327 ARG328 VAL329 GLU330 ARG331 GLN332 ASN333 ASN334 HIS335 SER336 ARG337 LEU338 SER339 SER340 ARG341 ILE342 ALA343 GLU344 ILE345 ASP346 ALA347 ARG348 GLY349 VAL350 PHE351 GLN352 VAL353 ARG354 TRP355 GLN356 SER357 PRO358 GLU359 PRO360 ILE361 ARG362 PRO363 ASP364 PRO365 TYR366 VAL367 VAL368 VAL369 HIS370 ASN371 LEU372 ASP373 ASP374 TRP375 SER376 ALA377 SER378 MET379 GLY380
Unit 3 SER2 ALA3 ASN4 SER5 LEU6 LEU7 GLY8 SER9 LEU10 ARG11 GLU12 LEU13 GLN14 VAL15 LEU16 VAL17 LEU18 ASN19 PRO20 PRO21 GLY22 GLU23 VAL24 SER25 ASP26 ALA27 LEU28 VAL29 LEU30 GLN31 LEU32 ILE33 ARG34 ILE35 GLY36 CYS37 SER38 VAL39 ARG40 GLN41 CYS42 TRP43 PRO44 PRO45 PRO46 GLU47 ALA48 PHE49 ASP50 VAL51 PRO52 VAL53 ASP54 VAL55 VAL56 PHE57 THR58 SER59 ILE60 PHE61 GLN62 ASN63 ARG64 HIS65 HIS66 ASP67 GLU68 ILE69 ALA70 ALA71 LEU72 LEU73 ALA74 ALA75 GLY76 THR77 PRO78 ARG79 THR80 THR81 LEU82 VAL83 ALA84 LEU85 VAL86 GLU87 TYR88 GLU89 SER90 PRO91 ALA92 VAL93 LEU94 SER95 GLN96 ILE97 ILE98 GLU99 LEU100 GLU101 CYS102 HIS103 GLY104 VAL105 ILE106 THR107 GLN108 PRO109 LEU110 ASP111 ALA112 HIS113 ARG114 VAL115 LEU116 PRO117 VAL118 LEU119 VAL120 SER121 ALA122 ARG123 ARG124 ILE125 SER126 GLU127 GLU128 MET129 ALA130 LYS131 LEU132 LYS133 GLN134 LYS135 THR136 GLU137 GLN138 LEU139 GLN140 ASP141 ARG142 ILE143 ALA144 GLY145 GLN146 ALA147 ARG148 ILE149 ASN150 GLN151 ALA152 LYS153 VAL154 LEU155 LEU156 MET157 GLN158 ARG159 HIS160 GLY161 TRP162 ASP163 GLU164 ARG165 GLU166 ALA167 HIS168 GLN169 HIS170 LEU171 SER172 ARG173 GLU174 ALA175 MET176 LYS177 ARG178 ARG179 GLU180 PRO181 ILE182 LEU183 LYS184 ILE185 ALA186 GLN187 GLU188 LEU189 LEU190
Unit 4 SER2 ALA3 ASN4 SER5 LEU6 LEU7 GLY8 SER9 LEU10 ARG11 GLU12 LEU13 GLN14 VAL15 LEU16 VAL17 LEU18 ASN19 PRO20 PRO21 GLY22 GLU23 VAL24 SER25 ASP26 ALA27 LEU28 VAL29 LEU30 GLN31 LEU32 ILE33 ARG34 ILE35 GLY36 CYS37 SER38 VAL39 ARG40 GLN41 CYS42 TRP43 PRO44 PRO45 PRO46 GLU47 ALA48 PHE49 ASP50 VAL51 PRO52 VAL53 ASP54 VAL55 VAL56 PHE57 THR58 SER59 ILE60 PHE61 GLN62 ASN63 ARG64 HIS65 HIS66 ASP67 GLU68 ILE69 ALA70 ALA71 LEU72 LEU73 ALA74 ALA75 GLY76 THR77 PRO78 ARG79 THR80 THR81 LEU82 VAL83 ALA84 LEU85 VAL86 GLU87 TYR88 GLU89 SER90 PRO91 ALA92 VAL93 LEU94 SER95 GLN96 ILE97 ILE98 GLU99 LEU100 GLU101 CYS102 HIS103 GLY104 VAL105 ILE106 THR107 GLN108 PRO109 LEU110 ASP111 ALA112 HIS113 ARG114 VAL115 LEU116 PRO117 VAL118 LEU119 VAL120 SER121 ALA122 ARG123 ARG124 ILE125 SER126 GLU127 GLU128 MET129 ALA130 LYS131 LEU132 LYS133 GLN134 LYS135 THR136 GLU137 GLN138 LEU139 GLN140 ASP141 ARG142 ILE143 ALA144 GLY145 GLN146 ALA147 ARG148 ILE149 ASN150 GLN151 ALA152 LYS153 VAL154 LEU155 LEU156 MET157 GLN158 ARG159 HIS160 GLY161 TRP162 ASP163 GLU164 ARG165 GLU166 ALA167 HIS168 GLN169 HIS170 LEU171 SER172 ARG173 GLU174 ALA175 MET176 LYS177 ARG178 ARG179 GLU180 PRO181 ILE182 LEU183 LYS184 ILE185 ALA186 GLN187 GLU188 LEU189 LEU190 GLY191 ASN192 GLU193 PRO194 SER195

Ligands
Unit 5 BMD400
Unit 6 BMD500

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany