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Title | HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL C WIN68934 | |
Keywords | VIRUS, NUCLEOTIDYLTRANSFERASE, RHINOVIRUS COAT PROTEIN, RNA- TRANSFERASE, LIPOPROTEIN, WIN COMPOUND, PHOSPHOPROTEIN, THI PROTEASE, CAPSID PROTEIN, DRUG, VIRION, MEMBRANE, HELICASE, PROTEASE, NUCLEOTIDE-BINDING, HUMAN RHINOVIRUS 16, RNA REPL ANTIVIRAL COMPOUND, COVALENT PROTEIN-RNA LINKAGE, MYRISTATE HYDROLASE, CYTOPLASM, ATP-BINDING, CYTOPLASMIC VESICLE, HOS INTERACTION, RNA-DIRECTED RNA POLYMERASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1QJX | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 1 | 285 | 2288 | 0 |
2 | Protein | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 2 | 252 | 1978 | 0 |
3 | Protein | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 3 | 238 | 1846 | 0 |
4 | Protein | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 4 | 29 | 224 | 0 |
5 | Ligand | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 1 | 2 | 0 | 25 |
6 | Ligand | PROTEIN VP1PROTEIN VP2PROTEIN VP3PROTEIN VP4 | 4 | 1 | 0 | 15 |
7 | Water | 270 | 0 | 270 | ||
total | 1077 | 6336 | 310 |
Unit 1 | ASN1 PRO2 VAL3 GLU4 ARG5 TYR6 VAL7 ASP8 GLU9 VAL10 LEU11 ASN12 GLU13 VAL14 LEU15 VAL16 VAL17 PRO18 ASN19 ILE20 ASN21 GLN22 SER23 HIS24 PRO25 THR26 THR27 SER28 ASN29 ALA30 ALA31 PRO32 VAL33 LEU34 ASP35 ALA36 ALA37 GLU38 THR39 GLY40 HIS41 THR42 ASN43 LYS44 ILE45 GLN46 PRO47 GLU48 ASP49 THR50 ILE51 GLU52 THR53 ARG54 TYR55 VAL56 GLN57 SER58 SER59 GLN60 THR61 LEU62 ASP63 GLU64 MET65 SER66 VAL67 GLU68 SER69 PHE70 LEU71 GLY72 ARG73 SER74 GLY75 CYS76 ILE77 HIS78 GLU79 SER80 VAL81 LEU82 ASP83 ILE84 VAL85 ASP86 ASN87 TYR88 ASN89 ASP90 GLN91 SER92 PHE93 THR94 LYS95 TRP96 ASN97 ILE98 ASN99 LEU100 GLN101 GLU102 MET103 ALA104 GLN105 ILE106 ARG107 ARG108 LYS109 PHE110 GLU111 MET112 PHE113 THR114 TYR115 ALA116 ARG117 PHE118 ASP119 SER120 GLU121 ILE122 THR123 MET124 VAL125 PRO126 SER127 VAL128 ALA129 ALA130 LYS131 ASP132 GLY133 HIS134 ILE135 GLY136 HIS137 ILE138 VAL139 MET140 GLN141 TYR142 MET143 TYR144 VAL145 PRO146 PRO147 GLY148 ALA149 PRO150 ILE151 PRO152 THR153 THR154 ARG155 ASP156 ASP157 TYR158 ALA159 TRP160 GLN161 SER162 GLY163 THR164 ASN165 ALA166 SER167 VAL168 PHE169 TRP170 GLN171 HIS172 GLY173 GLN174 PRO175 PHE176 PRO177 ARG178 PHE179 SER180 LEU181 PRO182 PHE183 LEU184 SER185 ILE186 ALA187 SER188 ALA189 TYR190 TYR191 MET192 PHE193 TYR194 ASP195 GLY196 TYR197 ASP198 GLY199 ASP200 THR201 TYR202 LYS203 SER204 ARG205 TYR206 GLY207 THR208 VAL209 VAL210 THR211 ASN212 ASP213 MET214 GLY215 THR216 LEU217 CYS218 SER219 ARG220 ILE221 VAL222 THR223 SER224 GLU225 GLN226 LEU227 HIS228 LYS229 VAL230 LYS231 VAL232 VAL233 THR234 ARG235 ILE236 TYR237 HIS238 LYS239 ALA240 LYS241 HIS242 THR243 LYS244 ALA245 TRP246 CYS247 PRO248 ARG249 PRO250 PRO251 ARG252 ALA253 VAL254 GLN255 TYR256 SER257 HIS258 THR259 HIS260 THR261 THR262 ASN263 TYR264 LYS265 LEU266 SER267 SER268 GLU269 VAL270 HIS271 ASN272 ASP273 VAL274 ALA275 ILE276 ARG277 PRO278 ARG279 THR280 ASN281 LEU282 THR283 THR284 VAL285 |
Unit 2 | SER10 ASP11 ARG12 ILE13 ILE14 GLN15 ILE16 THR17 ARG18 GLY19 ASP20 SER21 THR22 ILE23 THR24 SER25 GLN26 ASP27 VAL28 ALA29 ASN30 ALA31 VAL32 VAL33 GLY34 TYR35 GLY36 VAL37 TRP38 PRO39 HIS40 TYR41 LEU42 THR43 PRO44 GLN45 ASP46 ALA47 THR48 ALA49 ILE50 ASP51 LYS52 PRO53 THR54 GLN55 PRO56 ASP57 THR58 SER59 SER60 ASN61 ARG62 PHE63 TYR64 THR65 LEU66 ASP67 SER68 LYS69 MET70 TRP71 ASN72 SER73 THR74 SER75 LYS76 GLY77 TRP78 TRP79 TRP80 LYS81 LEU82 PRO83 ASP84 ALA85 LEU86 LYS87 ASP88 MET89 GLY90 ILE91 PHE92 GLY93 GLU94 ASN95 MET96 PHE97 TYR98 HIS99 PHE100 LEU101 GLY102 ARG103 SER104 GLY105 TYR106 THR107 VAL108 HIS109 VAL110 GLN111 CYS112 ASN113 ALA114 SER115 LYS116 PHE117 HIS118 GLN119 GLY120 THR121 LEU122 LEU123 VAL124 VAL125 MET126 ILE127 PRO128 GLU129 HIS130 GLN131 LEU132 ALA133 THR134 VAL135 ASN136 LYS137 GLY138 ASN139 VAL140 ASN141 ALA142 GLY143 TYR144 LYS145 TYR146 THR147 HIS148 PRO149 GLY150 GLU151 ALA152 GLY153 ARG154 GLU155 VAL156 GLY157 THR158 GLN159 VAL160 GLU161 ASN162 GLU163 LYS164 GLN165 PRO166 SER167 ASP168 ASP169 ASN170 TRP171 LEU172 ASN173 PHE174 ASP175 GLY176 THR177 LEU178 LEU179 GLY180 ASN181 LEU182 LEU183 ILE184 PHE185 PRO186 HIS187 GLN188 PHE189 ILE190 ASN191 LEU192 ARG193 SER194 ASN195 ASN196 SER197 ALA198 THR199 LEU200 ILE201 VAL202 PRO203 TYR204 VAL205 ASN206 ALA207 VAL208 PRO209 MET210 ASP211 SER212 MET213 VAL214 ARG215 HIS216 ASN217 ASN218 TRP219 SER220 LEU221 VAL222 ILE223 ILE224 PRO225 VAL226 CYS227 GLN228 LEU229 GLN230 SER231 ASN232 ASN233 ILE234 SER235 ASN236 ILE237 VAL238 PRO239 ILE240 THR241 VAL242 SER243 ILE244 SER245 PRO246 MET247 CYS248 ALA249 GLU250 PHE251 SER252 GLY253 ALA254 ARG255 ALA256 LYS257 THR258 VAL259 VAL260 GLN261 |
Unit 3 | GLY1 LEU2 PRO3 VAL4 TYR5 VAL6 THR7 PRO8 GLY9 SER10 GLY11 GLN12 PHE13 MET14 THR15 THR16 ASP17 ASP18 MET19 GLN20 SER21 PRO22 CYS23 ALA24 LEU25 PRO26 TRP27 TYR28 HIS29 PRO30 THR31 LYS32 GLU33 ILE34 PHE35 ILE36 PRO37 GLY38 GLU39 VAL40 LYS41 ASN42 LEU43 ILE44 GLU45 MET46 CYS47 GLN48 VAL49 ASP50 THR51 LEU52 ILE53 PRO54 ILE55 ASN56 SER57 THR58 GLN59 SER60 ASN61 ILE62 GLY63 ASN64 VAL65 SER66 MET67 TYR68 THR69 VAL70 THR71 LEU72 SER73 PRO74 GLN75 THR76 LYS77 LEU78 ALA79 GLU80 GLU81 ILE82 PHE83 ALA84 ILE85 LYS86 VAL87 ASP88 ILE89 ALA90 SER91 HIS92 PRO93 LEU94 ALA95 THR96 THR97 LEU98 ILE99 GLY100 GLU101 ILE102 ALA103 SER104 TYR105 PHE106 THR107 HIS108 TRP109 THR110 GLY111 SER112 LEU113 ARG114 PHE115 SER116 PHE117 MET118 PHE119 CYS120 GLY121 THR122 ALA123 ASN124 THR125 THR126 LEU127 LYS128 VAL129 LEU130 LEU131 ALA132 TYR133 THR134 PRO135 PRO136 GLY137 ILE138 GLY139 LYS140 PRO141 ARG142 SER143 ARG144 LYS145 GLU146 ALA147 MET148 LEU149 GLY150 THR151 HIS152 VAL153 VAL154 TRP155 ASP156 VAL157 GLY158 LEU159 GLN160 SER161 THR162 VAL163 SER164 LEU165 VAL166 VAL167 PRO168 TRP169 ILE170 SER171 ALA172 SER173 GLN174 TYR175 ARG176 PHE177 THR178 THR179 PRO180 ASP181 THR182 TYR183 SER184 SER185 ALA186 GLY187 TYR188 ILE189 THR190 CYS191 TRP192 TYR193 GLN194 THR195 ASN196 PHE197 VAL198 VAL199 PRO200 PRO201 ASN202 THR203 PRO204 ASN205 THR206 ALA207 GLU208 MET209 LEU210 CYS211 PHE212 VAL213 SER214 GLY215 CYS216 LYS217 ASP218 PHE219 CYS220 LEU221 ARG222 MET223 ALA224 ARG225 ASP226 THR227 ASP228 LEU229 HIS230 LYS231 GLN232 THR233 GLY234 PRO235 ILE236 THR237 GLN238 |
Unit 4 | GLY1 ALA2 GLN3 VAL4 SER5 ARG6 GLN7 SER23 LEU24 ASN25 TYR26 PHE27 ASN28 ILE29 ASN30 TYR31 PHE32 LYS33 ASP34 ALA35 ALA36 SER37 SER38 GLY39 ALA40 SER41 ARG42 LEU43 ASP44 |
Unit 5 | ZN6000 W027002 |
Unit 6 | MYR4000 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |