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Sequence, Chains, Asymmetric and Biological Units

Title DNA QUADRUPLEX STRUCTURE, (12MER) DNA, THEORETICAL MODEL
Keywords QUDRAPLEX DNA, MN BINDING DNA, NON-THROMBIN INHIBITOR, TELOMERE DNA DUPLEX
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1QDJ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 12 391 0
2  DNA    B 12 390 0
3  Ligand      2 0 2
total       26 781 2

Nucleic acids
Unit 1 G1 G2 G3 G4 T5 T6 T7 T8 G9 G10 G11 G12
Unit 2 G1 G2 G3 G4 T5 T6 T7 T8 G9 G10 G11 G12

Ligands
Unit 3 MN1 MN2

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany