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Sequence, Chains, Asymmetric and Biological Units

Title DNA QUADRUPLEX STRUCTURE, APTAMER (15MER) DNA, THEORETICAL MODEL
Keywords QUDRAPLEX DNA, THROMBIN INHIBITOR, MN BINDING DNA, TELOMERE DNA
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1QDG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 15 488 0
2  Ligand      2 0 2
total       17 488 2

Nucleic acids
Unit 1 G1 G2 T3 T4 G5 G6 T7 G8 T9 G10 G11 T12 T13 G14 G15

Ligands
Unit 2 MN1 MN2

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany