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Sequence, Chains, Asymmetric and Biological Units

Title CYTOCHROME C NITRITE REDUCTASE
Keywords C-TYPE CYTOCHROME LYSINE-COORDINATED HEME NITRITE REDUCTASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1QDB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CYTOCHROME C NITRITE REDUCTASE  A 473 3751 0
2  Protein   CYTOCHROME C NITRITE REDUCTASE  B 473 3751 0
3  Protein   CYTOCHROME C NITRITE REDUCTASE  C 473 3751 0
4  Ligand   CYTOCHROME C NITRITE REDUCTASE  A 9 0 231
5  Ligand   CYTOCHROME C NITRITE REDUCTASE  B 9 0 231
6  Ligand   CYTOCHROME C NITRITE REDUCTASE  C 9 0 231
7 Water     1485 0 1485
total       2931 11253 2178

Proteins
Unit 1 GLY42 ILE43 ALA44 GLY45 LYS46 GLU47 LYS48 SER49 GLU50 GLU51 TRP52 ALA53 LYS54 TYR55 TYR56 PRO57 ARG58 GLN59 PHE60 ASP61 SER62 TRP63 LYS64 LYS65 THR66 LYS67 GLU68 TYR69 ASP70 SER71 PHE72 THR73 ASP74 MET75 LEU76 ALA77 LYS78 ASP79 PRO80 ALA81 LEU82 VAL83 ILE84 ALA85 TRP86 SER87 GLY88 TYR89 ALA90 PHE91 SER92 LYS93 ASP94 TYR95 ASN96 SER97 PRO98 ARG99 GLY100 HIS101 TYR102 TYR103 ALA104 LEU105 GLN106 ASP107 ASN108 VAL109 ASN110 SER111 LEU112 ARG113 THR114 GLY115 ALA116 PRO117 VAL118 ASP119 ALA120 LYS121 THR122 GLY123 PRO124 LEU125 PRO126 THR127 ALA128 CYS129 TRP130 THR131 CYS132 LYS133 SER134 PRO135 ASP136 VAL137 PRO138 ARG139 LEU140 ILE141 GLU142 GLU143 ASP144 GLY145 GLU146 LEU147 GLU148 TYR149 PHE150 THR151 GLY152 LYS153 TRP154 ALA155 LYS156 TYR157 GLY158 SER159 GLN160 ILE161 VAL162 ASN163 VAL164 ILE165 GLY166 CYS167 ALA168 ASN169 CYS170 HIS171 ASP172 ASP173 LYS174 THR175 ALA176 GLU177 LEU178 LYS179 VAL180 ARG181 VAL182 PRO183 HIS184 LEU185 ASN186 ARG187 GLY188 LEU189 GLN190 ALA191 ALA192 GLY193 LEU194 LYS195 THR196 PHE197 GLU198 GLU199 SER200 THR201 HIS202 GLN203 ASP204 LYS205 ARG206 THR207 LEU208 VAL209 CYS210 ALA211 GLN212 CYS213 HIS214 VAL215 GLU216 TYR217 TYR218 PHE219 LYS220 LYS221 THR222 GLU223 TRP224 LYS225 ASP226 ALA227 LYS228 GLY229 ALA230 ASP231 LYS232 THR233 ALA234 MET235 VAL236 VAL237 THR238 LEU239 PRO240 TRP241 ALA242 ASN243 GLY244 VAL245 GLY246 LYS247 ASP248 GLY249 ASN250 ALA251 GLY252 VAL253 GLU254 GLY255 MET256 ILE257 LYS258 TYR259 TYR260 ASP261 GLU262 ILE263 ASN264 PHE265 SER266 ASP267 TRP268 THR269 HIS270 ASN271 ILE272 SER273 LYS274 THR275 PRO276 MET277 LEU278 LYS279 ALA280 GLN281 HIS282 PRO283 GLY284 PHE285 GLU286 PHE287 TRP288 LYS289 SER290 GLY291 ILE292 HIS293 GLY294 GLN295 LYS296 GLY297 VAL298 SER299 CYS300 ALA301 ASP302 CYS303 HIS304 MET305 PRO306 TYR307 THR308 GLN309 GLU310 GLY311 SER312 VAL313 LYS314 TYR315 SER316 ASP317 HIS318 GLN319 VAL320 LYS321 GLU322 ASN323 PRO324 LEU325 ASP326 SER327 MET328 ASP329 GLN330 SER331 CYS332 MET333 ASN334 CYS335 HIS336 ARG337 GLU338 SER339 GLU340 SER341 LYS342 LEU343 ARG344 GLY345 ILE346 VAL347 HIS348 GLN349 LYS350 TYR351 GLU352 ARG353 LYS354 GLU355 PHE356 LEU357 ASN358 LYS359 VAL360 ALA361 PHE362 ASP363 ASN364 ILE365 GLY366 LYS367 ALA368 HIS369 LEU370 GLU371 THR372 GLY373 LYS374 ALA375 ILE376 GLU377 ALA378 GLY379 ALA380 SER381 ASP382 GLU383 GLU384 LEU385 LYS386 GLU387 VAL388 ARG389 LYS390 LEU391 ILE392 ARG393 HIS394 GLY395 GLN396 PHE397 LYS398 ALA399 ASP400 MET401 ALA402 ILE403 ALA404 ALA405 HIS406 GLY407 ASN408 TYR409 PHE410 HIS411 ALA412 PRO413 GLU414 GLU415 THR416 LEU417 ARG418 LEU419 LEU420 ALA421 ALA422 GLY423 SER424 ASP425 ASP426 ALA427 GLN428 LYS429 ALA430 ARG431 LEU432 LEU433 LEU434 VAL435 LYS436 ILE437 LEU438 ALA439 LYS440 HIS441 GLY442 VAL443 MET444 ASP445 TYR446 ILE447 ALA448 PRO449 ASP450 PHE451 ASP452 THR453 LYS454 ASP455 LYS456 ALA457 GLN458 LYS459 LEU460 ALA461 LYS462 VAL463 ASP464 ILE465 ALA466 ALA467 LEU468 ALA469 ALA470 GLU471 LYS472 MET473 LYS474 PHE475 LYS476 GLN477 THR478 LEU479 GLU480 GLN481 GLU482 TRP483 LYS484 LYS485 GLU486 ALA487 LYS488 ALA489 LYS490 GLY491 ARG492 ALA493 ASN494 PRO495 GLU496 LEU497 TYR498 LYS499 ASP500 VAL501 ASP502 THR503 ILE504 ASN505 ASP506 GLY507 LYS508 SER509 SER510 TRP511 ASN512 LYS513 LYS514
Unit 2 GLY42 ILE43 ALA44 GLY45 LYS46 GLU47 LYS48 SER49 GLU50 GLU51 TRP52 ALA53 LYS54 TYR55 TYR56 PRO57 ARG58 GLN59 PHE60 ASP61 SER62 TRP63 LYS64 LYS65 THR66 LYS67 GLU68 TYR69 ASP70 SER71 PHE72 THR73 ASP74 MET75 LEU76 ALA77 LYS78 ASP79 PRO80 ALA81 LEU82 VAL83 ILE84 ALA85 TRP86 SER87 GLY88 TYR89 ALA90 PHE91 SER92 LYS93 ASP94 TYR95 ASN96 SER97 PRO98 ARG99 GLY100 HIS101 TYR102 TYR103 ALA104 LEU105 GLN106 ASP107 ASN108 VAL109 ASN110 SER111 LEU112 ARG113 THR114 GLY115 ALA116 PRO117 VAL118 ASP119 ALA120 LYS121 THR122 GLY123 PRO124 LEU125 PRO126 THR127 ALA128 CYS129 TRP130 THR131 CYS132 LYS133 SER134 PRO135 ASP136 VAL137 PRO138 ARG139 LEU140 ILE141 GLU142 GLU143 ASP144 GLY145 GLU146 LEU147 GLU148 TYR149 PHE150 THR151 GLY152 LYS153 TRP154 ALA155 LYS156 TYR157 GLY158 SER159 GLN160 ILE161 VAL162 ASN163 VAL164 ILE165 GLY166 CYS167 ALA168 ASN169 CYS170 HIS171 ASP172 ASP173 LYS174 THR175 ALA176 GLU177 LEU178 LYS179 VAL180 ARG181 VAL182 PRO183 HIS184 LEU185 ASN186 ARG187 GLY188 LEU189 GLN190 ALA191 ALA192 GLY193 LEU194 LYS195 THR196 PHE197 GLU198 GLU199 SER200 THR201 HIS202 GLN203 ASP204 LYS205 ARG206 THR207 LEU208 VAL209 CYS210 ALA211 GLN212 CYS213 HIS214 VAL215 GLU216 TYR217 TYR218 PHE219 LYS220 LYS221 THR222 GLU223 TRP224 LYS225 ASP226 ALA227 LYS228 GLY229 ALA230 ASP231 LYS232 THR233 ALA234 MET235 VAL236 VAL237 THR238 LEU239 PRO240 TRP241 ALA242 ASN243 GLY244 VAL245 GLY246 LYS247 ASP248 GLY249 ASN250 ALA251 GLY252 VAL253 GLU254 GLY255 MET256 ILE257 LYS258 TYR259 TYR260 ASP261 GLU262 ILE263 ASN264 PHE265 SER266 ASP267 TRP268 THR269 HIS270 ASN271 ILE272 SER273 LYS274 THR275 PRO276 MET277 LEU278 LYS279 ALA280 GLN281 HIS282 PRO283 GLY284 PHE285 GLU286 PHE287 TRP288 LYS289 SER290 GLY291 ILE292 HIS293 GLY294 GLN295 LYS296 GLY297 VAL298 SER299 CYS300 ALA301 ASP302 CYS303 HIS304 MET305 PRO306 TYR307 THR308 GLN309 GLU310 GLY311 SER312 VAL313 LYS314 TYR315 SER316 ASP317 HIS318 GLN319 VAL320 LYS321 GLU322 ASN323 PRO324 LEU325 ASP326 SER327 MET328 ASP329 GLN330 SER331 CYS332 MET333 ASN334 CYS335 HIS336 ARG337 GLU338 SER339 GLU340 SER341 LYS342 LEU343 ARG344 GLY345 ILE346 VAL347 HIS348 GLN349 LYS350 TYR351 GLU352 ARG353 LYS354 GLU355 PHE356 LEU357 ASN358 LYS359 VAL360 ALA361 PHE362 ASP363 ASN364 ILE365 GLY366 LYS367 ALA368 HIS369 LEU370 GLU371 THR372 GLY373 LYS374 ALA375 ILE376 GLU377 ALA378 GLY379 ALA380 SER381 ASP382 GLU383 GLU384 LEU385 LYS386 GLU387 VAL388 ARG389 LYS390 LEU391 ILE392 ARG393 HIS394 GLY395 GLN396 PHE397 LYS398 ALA399 ASP400 MET401 ALA402 ILE403 ALA404 ALA405 HIS406 GLY407 ASN408 TYR409 PHE410 HIS411 ALA412 PRO413 GLU414 GLU415 THR416 LEU417 ARG418 LEU419 LEU420 ALA421 ALA422 GLY423 SER424 ASP425 ASP426 ALA427 GLN428 LYS429 ALA430 ARG431 LEU432 LEU433 LEU434 VAL435 LYS436 ILE437 LEU438 ALA439 LYS440 HIS441 GLY442 VAL443 MET444 ASP445 TYR446 ILE447 ALA448 PRO449 ASP450 PHE451 ASP452 THR453 LYS454 ASP455 LYS456 ALA457 GLN458 LYS459 LEU460 ALA461 LYS462 VAL463 ASP464 ILE465 ALA466 ALA467 LEU468 ALA469 ALA470 GLU471 LYS472 MET473 LYS474 PHE475 LYS476 GLN477 THR478 LEU479 GLU480 GLN481 GLU482 TRP483 LYS484 LYS485 GLU486 ALA487 LYS488 ALA489 LYS490 GLY491 ARG492 ALA493 ASN494 PRO495 GLU496 LEU497 TYR498 LYS499 ASP500 VAL501 ASP502 THR503 ILE504 ASN505 ASP506 GLY507 LYS508 SER509 SER510 TRP511 ASN512 LYS513 LYS514
Unit 3 GLY42 ILE43 ALA44 GLY45 LYS46 GLU47 LYS48 SER49 GLU50 GLU51 TRP52 ALA53 LYS54 TYR55 TYR56 PRO57 ARG58 GLN59 PHE60 ASP61 SER62 TRP63 LYS64 LYS65 THR66 LYS67 GLU68 TYR69 ASP70 SER71 PHE72 THR73 ASP74 MET75 LEU76 ALA77 LYS78 ASP79 PRO80 ALA81 LEU82 VAL83 ILE84 ALA85 TRP86 SER87 GLY88 TYR89 ALA90 PHE91 SER92 LYS93 ASP94 TYR95 ASN96 SER97 PRO98 ARG99 GLY100 HIS101 TYR102 TYR103 ALA104 LEU105 GLN106 ASP107 ASN108 VAL109 ASN110 SER111 LEU112 ARG113 THR114 GLY115 ALA116 PRO117 VAL118 ASP119 ALA120 LYS121 THR122 GLY123 PRO124 LEU125 PRO126 THR127 ALA128 CYS129 TRP130 THR131 CYS132 LYS133 SER134 PRO135 ASP136 VAL137 PRO138 ARG139 LEU140 ILE141 GLU142 GLU143 ASP144 GLY145 GLU146 LEU147 GLU148 TYR149 PHE150 THR151 GLY152 LYS153 TRP154 ALA155 LYS156 TYR157 GLY158 SER159 GLN160 ILE161 VAL162 ASN163 VAL164 ILE165 GLY166 CYS167 ALA168 ASN169 CYS170 HIS171 ASP172 ASP173 LYS174 THR175 ALA176 GLU177 LEU178 LYS179 VAL180 ARG181 VAL182 PRO183 HIS184 LEU185 ASN186 ARG187 GLY188 LEU189 GLN190 ALA191 ALA192 GLY193 LEU194 LYS195 THR196 PHE197 GLU198 GLU199 SER200 THR201 HIS202 GLN203 ASP204 LYS205 ARG206 THR207 LEU208 VAL209 CYS210 ALA211 GLN212 CYS213 HIS214 VAL215 GLU216 TYR217 TYR218 PHE219 LYS220 LYS221 THR222 GLU223 TRP224 LYS225 ASP226 ALA227 LYS228 GLY229 ALA230 ASP231 LYS232 THR233 ALA234 MET235 VAL236 VAL237 THR238 LEU239 PRO240 TRP241 ALA242 ASN243 GLY244 VAL245 GLY246 LYS247 ASP248 GLY249 ASN250 ALA251 GLY252 VAL253 GLU254 GLY255 MET256 ILE257 LYS258 TYR259 TYR260 ASP261 GLU262 ILE263 ASN264 PHE265 SER266 ASP267 TRP268 THR269 HIS270 ASN271 ILE272 SER273 LYS274 THR275 PRO276 MET277 LEU278 LYS279 ALA280 GLN281 HIS282 PRO283 GLY284 PHE285 GLU286 PHE287 TRP288 LYS289 SER290 GLY291 ILE292 HIS293 GLY294 GLN295 LYS296 GLY297 VAL298 SER299 CYS300 ALA301 ASP302 CYS303 HIS304 MET305 PRO306 TYR307 THR308 GLN309 GLU310 GLY311 SER312 VAL313 LYS314 TYR315 SER316 ASP317 HIS318 GLN319 VAL320 LYS321 GLU322 ASN323 PRO324 LEU325 ASP326 SER327 MET328 ASP329 GLN330 SER331 CYS332 MET333 ASN334 CYS335 HIS336 ARG337 GLU338 SER339 GLU340 SER341 LYS342 LEU343 ARG344 GLY345 ILE346 VAL347 HIS348 GLN349 LYS350 TYR351 GLU352 ARG353 LYS354 GLU355 PHE356 LEU357 ASN358 LYS359 VAL360 ALA361 PHE362 ASP363 ASN364 ILE365 GLY366 LYS367 ALA368 HIS369 LEU370 GLU371 THR372 GLY373 LYS374 ALA375 ILE376 GLU377 ALA378 GLY379 ALA380 SER381 ASP382 GLU383 GLU384 LEU385 LYS386 GLU387 VAL388 ARG389 LYS390 LEU391 ILE392 ARG393 HIS394 GLY395 GLN396 PHE397 LYS398 ALA399 ASP400 MET401 ALA402 ILE403 ALA404 ALA405 HIS406 GLY407 ASN408 TYR409 PHE410 HIS411 ALA412 PRO413 GLU414 GLU415 THR416 LEU417 ARG418 LEU419 LEU420 ALA421 ALA422 GLY423 SER424 ASP425 ASP426 ALA427 GLN428 LYS429 ALA430 ARG431 LEU432 LEU433 LEU434 VAL435 LYS436 ILE437 LEU438 ALA439 LYS440 HIS441 GLY442 VAL443 MET444 ASP445 TYR446 ILE447 ALA448 PRO449 ASP450 PHE451 ASP452 THR453 LYS454 ASP455 LYS456 ALA457 GLN458 LYS459 LEU460 ALA461 LYS462 VAL463 ASP464 ILE465 ALA466 ALA467 LEU468 ALA469 ALA470 GLU471 LYS472 MET473 LYS474 PHE475 LYS476 GLN477 THR478 LEU479 GLU480 GLN481 GLU482 TRP483 LYS484 LYS485 GLU486 ALA487 LYS488 ALA489 LYS490 GLY491 ARG492 ALA493 ASN494 PRO495 GLU496 LEU497 TYR498 LYS499 ASP500 VAL501 ASP502 THR503 ILE504 ASN505 ASP506 GLY507 LYS508 SER509 SER510 TRP511 ASN512 LYS513 LYS514

Ligands
Unit 4 HEC515 HEC516 HEC517 HEC518 HEC519 CA520 SO41501 SO41504 SO41506
Unit 5 HEC515 HEC516 HEC517 HEC518 HEC519 CA520 SO41502 SO41505 SO41507
Unit 6 HEC515 HEC516 HEC517 HEC518 HEC519 CA520 SO41503 SO41508 SO41509

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany