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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE CYTOCHROME B6F (PLASTOHYDROQUINONE : PLASTO OXIDOREDUCTASE) FROM CHLAMYDOMONAS REINHARDTII
Keywords MEMBRANE PROTEIN COMPLEX, PHOTOSYNTHESIS, ELECTRON TRANSFER, OXYDOREDUCTASE, CHLOROPHYLL, BETA-CAROTENE, STIGMATELLIN, SULFOQUINOVOSYLDIACYLGLYCEROL, MONOGALACTOSYLDIACYLGLYCEROL
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Q90     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   APOCYTOCHROME F  A 292 2266 0
2  Protein   CYTOCHROME B6  B 212 1681 0
3  Protein   CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT  C 126 955 0
4  Protein   CYTOCHROME B6-F COMPLEX SUBUNIT 4  D 156 1201 0
5  Protein   CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT  R 39 283 0
6  Protein   CYTOCHROME B6F COMPLEX SUBUNIT PETG  G 30 224 0
7  Protein   CYTOCHROME B6F COMPLEX SUBUNIT PETL  L 32 242 0
8  Protein   CYTOCHROME B6F COMPLEX SUBUNIT PETM  M 34 247 0
9  Protein   CYTOCHROME B6F COMPLEX SUBUNIT PETN  N 31 231 0
10  Ligand   APOCYTOCHROME F  A 1 0 43
11  Ligand   CYTOCHROME B6  B 5 0 176
12  Ligand   CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT  C 1 0 4
13  Ligand   CYTOCHROME B6-F COMPLEX SUBUNIT 4  D 3 0 148
14  Ligand   CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT  R 1 0 33
15  Ligand   CYTOCHROME B6F COMPLEX SUBUNIT PETL  L 1 0 42
16 Water     2 0 2
total       966 7330 448

Proteins
Unit 1 TYR1 PRO2 VAL3 PHE4 ALA5 GLN6 GLN7 ASN8 TYR9 ALA10 ASN11 PRO12 ARG13 GLU14 ALA15 ASN16 GLY17 ARG18 ILE19 VAL20 CYS21 ALA22 ASN23 CYS24 HIS25 LEU26 ALA27 GLN28 LYS29 ALA30 VAL31 GLU32 ILE33 GLU34 VAL35 PRO36 GLN37 ALA38 VAL39 LEU40 PRO41 ASP42 THR43 VAL44 PHE45 GLU46 ALA47 VAL48 ILE49 GLU50 LEU51 PRO52 TYR53 ASP54 LYS55 GLN56 VAL57 LYS58 GLN59 VAL60 LEU61 ALA62 ASN63 GLY64 LYS65 LYS66 GLY67 ASP68 LEU69 ASN70 VAL71 GLY72 MET73 VAL74 LEU75 ILE76 LEU77 PRO78 GLU79 GLY80 PHE81 GLU82 LEU83 ALA84 PRO85 PRO86 ASP87 ARG88 VAL89 PRO90 ALA91 GLU92 ILE93 LYS94 GLU95 LYS96 VAL97 GLY98 ASN99 LEU100 TYR101 TYR102 GLN103 PRO104 TYR105 SER106 PRO107 GLU108 GLN109 LYS110 ASN111 ILE112 LEU113 VAL114 VAL115 GLY116 PRO117 VAL118 PRO119 GLY120 LYS121 LYS122 TYR123 SER124 GLU125 MET126 VAL127 VAL128 PRO129 ILE130 LEU131 SER132 PRO133 ASP134 PRO135 ALA136 LYS137 ASN138 LYS139 ASN140 VAL141 SER142 TYR143 LEU144 LYS145 TYR146 PRO147 ILE148 TYR149 PHE150 GLY151 GLY152 ASN153 ARG154 GLY155 ARG156 GLY157 GLN158 VAL159 TYR160 PRO161 ASP162 GLY163 LYS164 LYS165 SER166 ASN167 ASN168 THR169 ILE170 TYR171 ASN172 ALA173 SER174 ALA175 ALA176 GLY177 LYS178 ILE179 VAL180 ALA181 ILE182 THR183 ALA184 LEU185 SER186 GLU187 LYS188 LYS189 GLY190 GLY191 PHE192 GLU193 VAL194 SER195 ILE196 GLU197 LYS198 ALA199 ASN200 GLY201 GLU202 VAL203 VAL204 VAL205 ASP206 LYS207 ILE208 PRO209 ALA210 GLY211 PRO212 ASP213 LEU214 ILE215 VAL216 LYS217 GLU218 GLY219 GLN220 THR221 VAL222 GLN223 ALA224 ASP225 GLN226 PRO227 LEU228 THR229 ASN230 ASN231 PRO232 ASN233 VAL234 GLY235 GLY236 PHE237 GLY238 GLN239 ALA240 GLU241 THR242 GLU243 ILE244 VAL245 LEU246 GLN247 ASN248 PRO249 ALA250 ARG251 ILE252 GLN253 GLY254 LEU255 LEU256 VAL257 PHE258 PHE259 SER260 PHE261 VAL262 LEU263 LEU264 THR265 GLN266 VAL267 LEU268 LEU269 VAL270 LEU271 LYS272 LYS273 LYS274 GLN275 PHE276 GLU277 LYS278 VAL279 GLN280 LEU281 ALA282 GLU283 MET284 ASN285 PHE286 HIS287 HIS288 HIS289 HIS290 HIS291 HIS292
Unit 2 VAL4 TYR5 ASP6 TRP7 PHE8 GLU9 GLU10 ARG11 LEU12 GLU13 ILE14 GLN15 ALA16 ILE17 ALA18 ASP19 ASP20 ILE21 THR22 SER23 LYS24 TYR25 VAL26 PRO27 PRO28 HIS29 VAL30 ASN31 ILE32 PHE33 TYR34 CYS35 ILE36 GLY37 GLY38 ILE39 THR40 PHE41 THR42 CYS43 PHE44 LEU45 VAL46 GLN47 VAL48 ALA49 THR50 GLY51 PHE52 ALA53 MET54 THR55 PHE56 TYR57 TYR58 ARG59 PRO60 THR61 VAL62 ALA63 GLU64 ALA65 PHE66 ALA67 SER68 VAL69 GLN70 TYR71 ILE72 MET73 THR74 ASP75 VAL76 ASN77 PHE78 GLY79 TRP80 LEU81 ILE82 ARG83 SER84 ILE85 HIS86 ARG87 TRP88 SER89 ALA90 SER91 MET92 MET93 VAL94 LEU95 MET96 MET97 VAL98 LEU99 HIS100 VAL101 PHE102 ARG103 VAL104 TYR105 LEU106 THR107 GLY108 GLY109 PHE110 LYS111 ARG112 PRO113 ARG114 GLU115 LEU116 THR117 TRP118 VAL119 THR120 GLY121 VAL122 ILE123 MET124 ALA125 VAL126 CYS127 THR128 VAL129 SER130 PHE131 GLY132 VAL133 THR134 GLY135 TYR136 SER137 LEU138 PRO139 TRP140 ASP141 GLN142 VAL143 GLY144 TYR145 TRP146 ALA147 VAL148 LYS149 ILE150 VAL151 THR152 GLY153 VAL154 PRO155 ASP156 ALA157 ILE158 PRO159 GLY160 VAL161 GLY162 GLY163 PHE164 ILE165 VAL166 GLU167 LEU168 LEU169 ARG170 GLY171 GLY172 VAL173 GLY174 VAL175 GLY176 GLN177 ALA178 THR179 LEU180 THR181 ARG182 PHE183 TYR184 SER185 LEU186 HIS187 THR188 PHE189 VAL190 LEU191 PRO192 LEU193 LEU194 THR195 ALA196 VAL197 PHE198 MET199 LEU200 MET201 HIS202 PHE203 LEU204 MET205 ILE206 ARG207 LYS208 GLN209 GLY210 ILE211 SER212 GLY213 PRO214 LEU215
Unit 3 GLN80 ALA81 ALA82 LYS83 ASP84 ALA85 LEU86 GLY87 ASN88 ASP89 ILE90 LYS91 ALA92 GLY93 GLU94 TRP95 LEU96 LYS97 THR98 HIS99 LEU100 ALA101 GLY102 ASP103 ARG104 SER105 LEU106 SER107 GLN108 GLY109 LEU110 LYS111 GLY112 ASP113 PRO114 THR115 TYR116 LEU117 ILE118 VAL119 THR120 ALA121 ASP122 SER123 THR124 ILE125 GLU126 LYS127 TYR128 GLY129 LEU130 ASN131 ALA132 VAL133 CYS134 THR135 HIS136 LEU137 GLY138 CYS139 VAL140 VAL141 PRO142 TRP143 VAL144 ALA145 ALA146 GLU147 ASN148 LYS149 PHE150 LYS151 CYS152 PRO153 CYS154 HIS155 GLY156 SER157 GLN158 TYR159 ASN160 ALA161 GLU162 GLY163 LYS164 VAL165 VAL166 ARG167 GLY168 PRO169 ALA170 PRO171 LEU172 SER173 LEU174 ALA175 LEU176 ALA177 HIS178 CYS179 ASP180 VAL181 ALA182 GLU183 GLY185 LEU186 VAL187 THR188 PHE189 SER190 THR191 TRP192 THR193 GLU194 THR195 ASP196 PHE197 ARG198 THR199 GLY200 LEU201 GLU202 PRO203 TRP204 TRP205 ALA206
Unit 4 THR4 LYS5 LYS6 PRO7 ASP8 LEU9 SER10 ASP11 PRO12 VAL13 LEU14 LYS15 ALA16 LYS17 LEU18 ALA19 LYS20 GLY21 MET22 GLY23 HIS24 ASN25 THR26 TYR27 GLY28 GLU29 PRO30 ALA31 TRP32 PRO33 ASN34 ASP35 LEU36 LEU37 TYR38 MET39 PHE40 PRO41 VAL42 VAL43 ILE44 LEU45 GLY46 THR47 PHE48 ALA49 CYS50 VAL51 ILE52 GLY53 LEU54 SER55 VAL56 LEU57 ASP58 PRO59 ALA60 ALA61 MET62 GLY63 GLU64 PRO65 ALA66 ASN67 PRO68 PHE69 ALA70 THR71 PRO72 LEU73 GLU74 ILE75 LEU76 PRO77 GLU78 TRP79 TYR80 PHE81 TYR82 PRO83 VAL84 PHE85 GLN86 ILE87 LEU88 ARG89 VAL90 VAL91 PRO92 ASN93 LYS94 LEU95 LEU96 GLY97 VAL98 LEU99 LEU100 MET101 ALA102 ALA103 VAL104 PRO105 ALA106 GLY107 LEU108 ILE109 THR110 VAL111 PRO112 PHE113 ILE114 GLU115 SER116 ILE117 ASN118 LYS119 PHE120 GLN121 ASN122 PRO123 TYR124 ARG125 ARG126 PRO127 ILE128 ALA129 THR130 ILE131 LEU132 PHE133 LEU134 LEU135 GLY136 THR137 LEU138 VAL139 ALA140 VAL141 TRP142 LEU143 GLY144 ILE145 GLY146 SER147 THR148 PHE149 PRO150 ILE151 ASP152 ILE153 SER154 LEU155 THR156 LEU157 GLY158 LEU159
Unit 5 SER33 SER34 GLU35 VAL36 PRO37 ASP38 MET39 ASN40 LYS41 ARG42 ASN43 ILE44 MET45 ASN46 LEU47 ILE48 LEU49 ALA50 GLY51 GLY52 ALA53 GLY54 LEU55 PRO56 ILE57 THR58 THR59 LEU60 ALA61 LEU62 GLY63 TYR64 GLY65 ALA66 PHE67 PHE68 VAL69 PRO70 PRO71
Unit 6 MET1 VAL2 GLU3 PRO4 LEU5 LEU6 CYS7 GLY8 ILE9 VAL10 LEU11 GLY12 LEU13 VAL14 PRO15 VAL16 THR17 ILE18 ALA19 GLY20 LEU21 PHE22 VAL23 THR24 ALA25 TYR26 LEU27 GLN28 TYR29 LEU30
Unit 7 MET1 LEU2 THR3 ILE4 THR5 SER6 TYR7 VAL8 GLY9 LEU10 LEU11 ILE12 GLY13 ALA14 LEU15 VAL16 PHE17 THR18 LEU19 GLY20 ILE21 TYR22 LEU23 GLY24 LEU25 LEU26 LYS27 VAL28 VAL29 LYS30 LEU31 ILE32
Unit 8 GLU62 ALA63 GLU64 PHE65 ILE66 ALA67 GLY68 THR69 ALA70 LEU71 THR72 MET73 VAL74 GLY75 MET76 THR77 LEU78 VAL79 GLY80 LEU81 ALA82 ILE83 GLY84 PHE85 VAL86 LEU87 LEU88 ARG89 VAL90 GLU91 SER92 LEU93 VAL94 GLU95
Unit 9 GLY68 GLU69 PRO70 ALA71 ILE72 VAL73 GLN74 ILE75 GLY76 TRP77 ALA78 ALA79 THR80 CYS81 VAL82 MET83 PHE84 SER85 PHE86 SER87 LEU88 SER89 LEU90 VAL91 VAL92 TRP93 GLY94 ARG95 SER96 GLY97 LEU98

Ligands
Unit 10 HEC900
Unit 11 HEC901 HEC902 HEC903 BCR904 LFA960
Unit 12 FES210
Unit 13 CLA910 TDS920 LMG953
Unit 14 SQD950
Unit 15 LMG951

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany