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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF D(5MCCTCTCC)4
Keywords DNA SOLUTION STRUCTURE; I-MOTIF; PROTONATED CYTIDINE; HEMIPROTONATED BASE-PAIRS
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Q2T     released     available     available     Quaternary Structure Server  
NDB   1Q2T                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 7 189 31
2  DNA    B 7 189 31
3  DNA    C 7 185 31
4  DNA    D 7 185 31
total       28 748 124

Nucleic acids
Unit 1 MCY1 DC2 DT3 DC4 DT5 DC6 DC7
Unit 2 MCY1 DC2 DT3 DC4 DT5 DC6 DC7
Unit 3 MCY1 DC2 DT3 DC4 DT5 DC6 DC7
Unit 4 MCY1 DC2 DT3 DC4 DT5 DC6 DC7

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany