1PKQ - Sequence, Chains, Asymmetric and Biological Units

• Title: MYELIN OLIGODENDROCYTE GLYCOPROTEIN-(8-18C5) FAB-COMPLEX
• Keywords: AUTOANTIBODY, MULTIPLE SCLEROSIS, EAE, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1PKQ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	(8-18C5) CHIMERIC FAB, LIGHT CHAIN	A	219	1673	0
2	Protein	(8-18C5) CHIMERIC FAB, HEAVY CHAIN	B	221	1633	0
3	Protein	MYELIN OLIGODENDROCYTE GLYCOPROTEIN	E	121	951	0
4	Protein	(8-18C5) CHIMERIC FAB, LIGHT CHAIN	F	216	1649	0
5	Protein	(8-18C5) CHIMERIC FAB, HEAVY CHAIN	G	214	1590	0
6	Protein	MYELIN OLIGODENDROCYTE GLYCOPROTEIN	J	118	936	0
7	Water			85	0	85
total				1194	8432	85

Proteins

Unit 1	ASP 1 ILE 2 GLU 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 ALA 15 GLY 16 GLU 17 LYS 18 VAL 19 THR 20 MET 21 SER 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 28 LEU 29 LEU 30 ASN 30A SER 30B GLY 30C ASN 30D GLN 30E LYS 30F ASN 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LEU 42 PRO 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 GLY 50 ALA 51 SER 52 THR 53 ARG 54 GLU 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 THR 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 VAL 78 GLN 79 ALA 80 GLU 81 ASP 82 LEU 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 ASN 90 ASP 91 HIS 92 SER 93 TYR 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213
Unit 2	GLU 1 VAL 2 LYS 3 LEU 4 HIS 5 GLU 6 SER 7 GLY 8 ALA 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 GLU 19 ILE 20 SER 21 CYS 22 LYS 23 ALA 24 THR 25 GLY 26 TYR 27 THR 28 PHE 29 SER 30 SER 31 PHE 32 TRP 33 ILE 34 GLU 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 HIS 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 GLU 50 ILE 51 LEU 52 PRO 52A GLY 53 ARG 54 GLY 55 ARG 56 THR 57 ASN 58 TYR 59 ASN 60 GLU 61 LYS 62 PHE 63 LYS 64 GLY 65 LYS 66 ALA 67 THR 68 PHE 69 THR 70 ALA 71 GLU 72 THR 73 SER 74 SER 75 ASN 76 THR 77 ALA 78 TYR 79 MET 80 GLN 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 SER 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 THR 94 GLY 95 ASN 96 THR 97 MET 98 VAL 99 ASN 100 MET 100A PRO 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 THR 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 SER 128 LYS 129 SER 130 THR 131 SER 132 GLY 133 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214 SER 215 CYS 216
Unit 3	GLY 1A SER 1B GLY 1C GLN 2 PHE 3 ARG 4 VAL 5 ILE 6 GLY 7 PRO 8 GLY 9 HIS 10 PRO 11 ILE 12 ARG 13 ALA 14 LEU 15 VAL 16 GLY 17 ASP 18 GLU 19 ALA 20 GLU 21 LEU 22 PRO 23 CYS 24 ARG 25 ILE 26 SER 27 PRO 28 GLY 29 LYS 30 ASN 31 ALA 32 THR 33 GLY 34 MET 35 GLU 36 VAL 37 GLY 38 TRP 39 TYR 40 ARG 41 SER 42 PRO 43 PHE 44 SER 45 ARG 46 VAL 47 VAL 48 HIS 49 LEU 50 TYR 51 ARG 52 ASN 53 GLY 54 LYS 55 ASP 56 GLN 57 ASP 58 ALA 59 GLU 60 GLN 61 ALA 62 PRO 63 GLU 64 TYR 65 ARG 66 GLY 67 ARG 68 THR 69 GLU 70 LEU 71 LEU 72 LYS 73 GLU 74 SER 75 ILE 76 GLY 77 GLU 78 GLY 79 LYS 80 VAL 81 ALA 82 LEU 83 ARG 84 ILE 85 GLN 86 ASN 87 VAL 88 ARG 89 PHE 90 SER 91 ASP 92 GLU 93 GLY 94 GLY 95 TYR 96 THR 97 CYS 98 PHE 99 PHE 100 ARG 101 ASP 102 HIS 103 SER 104 TYR 105 GLN 106 GLU 107 GLU 108 ALA 109 ALA 110 VAL 111 GLU 112 LEU 113 LYS 114 VAL 115 GLU 116 ASP 117 PRO 118 PHE 119
Unit 4	ASP 1 ILE 2 GLU 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 ALA 15 GLY 16 GLU 17 LYS 18 VAL 19 THR 20 MET 21 SER 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 28 LEU 29 LEU 30 ASN 30A SER 30B GLY 30C ASN 30D GLN 30E LYS 30F ASN 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LEU 42 PRO 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 GLY 50 ALA 51 SER 52 THR 53 ARG 54 GLU 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 THR 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 VAL 78 GLN 79 ALA 80 GLU 81 ASP 82 LEU 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 ASN 90 ASP 91 HIS 92 SER 93 TYR 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210
Unit 5	GLU 1 VAL 2 LYS 3 LEU 4 HIS 5 GLU 6 SER 7 GLY 8 ALA 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 GLU 19 ILE 20 SER 21 CYS 22 LYS 23 ALA 24 THR 25 GLY 26 TYR 27 THR 28 PHE 29 SER 30 SER 31 PHE 32 TRP 33 ILE 34 GLU 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 HIS 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 GLU 50 ILE 51 LEU 52 PRO 52A GLY 53 ARG 54 GLY 55 ARG 56 THR 57 ASN 58 TYR 59 ASN 60 GLU 61 LYS 62 PHE 63 LYS 64 GLY 65 LYS 66 ALA 67 THR 68 PHE 69 THR 70 ALA 71 GLU 72 THR 73 SER 74 SER 75 ASN 76 THR 77 ALA 78 TYR 79 MET 80 GLN 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 SER 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 THR 94 GLY 95 ASN 96 THR 97 MET 98 VAL 99 ASN 100 MET 100A PRO 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 THR 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 SER 128 GLY 133 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213
Unit 6	GLY 1 GLN 2 PHE 3 ARG 4 VAL 5 ILE 6 GLY 7 PRO 8 GLY 9 HIS 10 PRO 11 ILE 12 ARG 13 ALA 14 LEU 15 VAL 16 GLY 17 ASP 18 GLU 19 ALA 20 GLU 21 LEU 22 PRO 23 CYS 24 ARG 25 ILE 26 SER 27 PRO 28 GLY 29 LYS 30 ASN 31 ALA 32 THR 33 GLY 34 MET 35 GLU 36 VAL 37 GLY 38 TRP 39 TYR 40 ARG 41 SER 42 PRO 43 PHE 44 SER 45 ARG 46 VAL 47 VAL 48 HIS 49 LEU 50 TYR 51 ARG 52 ASN 53 GLY 54 LYS 55 ASP 56 GLN 57 ASP 58 ALA 59 GLU 60 GLN 61 ALA 62 PRO 63 GLU 64 TYR 65 ARG 66 GLY 67 ARG 68 THR 69 GLU 70 LEU 71 LEU 72 LYS 73 GLU 74 SER 75 ILE 76 GLY 77 GLU 78 GLY 79 LYS 80 VAL 81 ALA 82 LEU 83 ARG 84 ILE 85 GLN 86 ASN 87 VAL 88 ARG 89 PHE 90 SER 91 ASP 92 GLU 93 GLY 94 GLY 95 TYR 96 THR 97 CYS 98 PHE 99 PHE 100 ARG 101 ASP 102 HIS 103 SER 104 TYR 105 GLN 106 GLU 107 GLU 108 ALA 109 ALA 110 VAL 111 GLU 112 LEU 113 LYS 114 VAL 115 GLU 116 ASP 117 PRO 118