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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING STEM- LOOP RNA
Keywords NMR, FRAMESHIFT, HIV, TETRALOOP, RNA STRUCTURE
Experiment NMR
Number of Models  20


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1PJY     released     available     available     Quaternary Structure Server  
NDB   1PJY                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 22 709 0
total       22 709 0

Nucleic acids
Unit 1 G1 G2 C3 C4 U5 U6 C7 C8 C9 A10 C11 A12 A13 G14 G15 G16 A17 A18 G19 G20 C21 C22

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany