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Sequence, Chains, Asymmetric and Biological Units

Title PROPLASMEPSIN II FROM PLASMODIUM FALCIPARUM
Keywords ASPARTIC PROTEINASE ZYMOGEN, HEMOGLOBINASE, MALARIA, HYDROLA ASPARTYL PROTEASE, GLYCOPROTEIN, ASPARTIC PROTEASE ZYMOGEN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1PFZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROPLASMEPSIN II  A 370 2943 0
2  Protein   PROPLASMEPSIN II  B 369 2933 0
3  Protein   PROPLASMEPSIN II  C 356 2836 0
4  Protein   PROPLASMEPSIN II  D 369 2936 0
5  Ligand   PROPLASMEPSIN II  A 3 0 18
6  Ligand   PROPLASMEPSIN II  C 2 0 12
7  Ligand   PROPLASMEPSIN II  D 1 0 6
8 Water     731 0 731
total       2201 11648 767

Proteins
Unit 1 SER1 SER2 ASN3 ASP4 ASN5 ILE6 GLU7 LEU8 VAL9 ASP10 PHE11 GLN12 ASN13 ILE14 MET15 PHE16 TYR17 GLY18 ASP19 ALA20 GLU21 VAL22 GLY23 ASP24 ASN25 GLN26 GLN27 PRO28 PHE29 THR30 PHE31 ILE32 LEU33 ASP34 THR35 GLY36 SER37 ALA38 ASN39 LEU40 TRP41 VAL42 PRO43 SER44 VAL45 LYS46 CYS47 THR48 THR49 ALA50 GLY51 CYS52 LEU53 THR54 LYS55 HIS56 LEU57 TYR58 ASP59 SER60 SER61 LYS62 SER63 ARG64 THR65 TYR66 GLU67 LYS68 ASP69 GLY70 THR71 LYS72 VAL73 GLU74 MET75 HIS79P LEU80P THR81 THR81P VAL82 ILE82P SER83 GLY83P GLY84 PHE84P PHE85 LYS85P PHE86 VAL86P SER87 GLU87P LYS88 ASN88P ASP89 ALA89P LEU90 HIS90P VAL91 ASP91P THR92 ARG92P VAL93 ILE93P GLY94 LEU94P ASN95 LYS95P LEU96 THR96P SER97 ILE97P LEU98 LYS98P PRO99 THR99P TYR100 HIS100P LYS101 LYS101P PHE102 LEU102P ILE103 LYS103P GLU104 ASN104P VAL105 TYR105P ILE106 ILE106P ASP107 LYS107P THR108 GLU108P ASN109 SER109P GLY110 VAL110P PHE111 ASN111P GLU112 PHE112P PRO113 LEU113P THR114 ASN114P TYR115 SER115P THR116 GLY116P ALA117 LEU117P SER118 THR118P THR119 LYS119P PHE120 THR120P ASP121 ASN121P GLY122 TYR122P ILE123 LEU123P LEU124 GLY124P GLY125 LEU126 GLY127 TRP128 LYS129 ASP130 LEU131 SER132 ILE133 GLY134 SER135 VAL136 ASP137 PRO138 ILE139 VAL140 VAL141 GLU142 LEU143 LYS144 ASN145 GLN146 ASN147 LYS148 ILE149 GLU150 ASN151 ALA152 LEU153 PHE154 THR155 PHE156 TYR157 LEU158 PRO159 VAL160 HIS161 ASP162 LYS163 HIS164 THR165 GLY166 PHE167 LEU168 THR169 ILE170 GLY171 GLY172 ILE173 GLU174 GLU175 ARG176 PHE177 TYR178 GLU179 GLY180 PRO181 LEU182 THR183 TYR184 GLU185 LYS186 LEU187 ASN188 HIS189 ASP190 LEU191 TYR192 TRP193 GLN194 ILE195 THR196 LEU197 ASP198 ALA199 HIS200 VAL201 GLY202 ASN203 ILE204 MET205 LEU206 GLU207 LYS208 ALA209 ASN210 CYS211 ILE212 VAL213 ASP214 SER215 GLY216 THR217 SER218 ALA219 ILE220 THR221 VAL222 PRO223 THR224 ASP225 PHE226 LEU227 ASN228 LYS229 MET230 LEU231 GLN232 ASN233 LEU234 ASP235 VAL236 ILE237 LYS238 VAL239 PRO240 PHE241 LEU242 PRO243 PHE244 TYR245 VAL246 THR247 LEU248 CYS249 ASN250 ASN251 SER252 LYS253 LEU254 PRO255 THR256 PHE257 GLU258 PHE259 THR260 SER261 GLU262 ASN263 GLY264 LYS265 TYR266 THR267 LEU268 GLU269 PRO270 GLU271 TYR272 TYR273 LEU274 GLN275 HIS276 ILE277 GLU278 ASP279 VAL280 GLY281 PRO282 GLY283 LEU284 CYS285 MET286 LEU287 ASN288 ILE289 ILE290 GLY291 LEU292 ASP293 PHE294 PRO295 VAL296 PRO297 THR298 PHE299 ILE300 LEU301 GLY302 ASP303 PRO304 PHE305 MET306 ARG307 LYS308 TYR309 PHE310 THR311 VAL312 PHE313 ASP314 TYR315 ASP316 ASN317 HIS318 SER319 VAL320 GLY321 ILE322 ALA323 LEU324 ALA325 LYS326 LYS327 ASN328 LEU329
Unit 2 SER1 SER2 ASN3 ASP4 ASN5 ILE6 GLU7 LEU8 VAL9 ASP10 PHE11 GLN12 ASN13 ILE14 MET15 PHE16 TYR17 GLY18 ASP19 ALA20 GLU21 VAL22 GLY23 ASP24 ASN25 GLN26 GLN27 PRO28 PHE29 THR30 PHE31 ILE32 LEU33 ASP34 THR35 GLY36 SER37 ALA38 ASN39 LEU40 TRP41 VAL42 PRO43 SER44 VAL45 LYS46 CYS47 THR48 THR49 ALA50 GLY51 CYS52 LEU53 THR54 LYS55 HIS56 LEU57 TYR58 ASP59 SER60 SER61 LYS62 SER63 ARG64 THR65 TYR66 GLU67 LYS68 ASP69 GLY70 THR71 LYS72 VAL73 GLU74 MET75 GLU78P HIS79P LEU80P THR81P VAL82 ILE82P SER83 GLY83P GLY84 PHE84P PHE85 LYS85P PHE86 VAL86P SER87 GLU87P LYS88 ASN88P ASP89 ALA89P LEU90 HIS90P VAL91 ASP91P THR92 ARG92P VAL93 ILE93P GLY94 LEU94P ASN95 LYS95P LEU96 THR96P SER97 ILE97P LEU98 LYS98P PRO99 THR99P TYR100 HIS100P LYS101 LYS101P PHE102 LEU102P ILE103 LYS103P GLU104 ASN104P VAL105 TYR105P ILE106 ILE106P ASP107 LYS107P THR108 GLU108P ASN109 SER109P GLY110 VAL110P PHE111 ASN111P GLU112 PHE112P PRO113 LEU113P THR114 ASN114P TYR115 SER115P THR116 GLY116P ALA117 LEU117P SER118 THR118P THR119 LYS119P PHE120 THR120P ASP121 ASN121P GLY122 TYR122P ILE123 LEU123P LEU124 GLY124P GLY125 LEU126 GLY127 TRP128 LYS129 ASP130 LEU131 SER132 ILE133 GLY134 SER135 VAL136 ASP137 PRO138 ILE139 VAL140 VAL141 GLU142 LEU143 LYS144 ASN145 GLN146 ASN147 LYS148 ILE149 GLU150 ASN151 ALA152 LEU153 PHE154 THR155 PHE156 TYR157 LEU158 PRO159 VAL160 HIS161 ASP162 LYS163 HIS164 THR165 GLY166 PHE167 LEU168 THR169 ILE170 GLY171 GLY172 ILE173 GLU174 GLU175 ARG176 PHE177 TYR178 GLU179 GLY180 PRO181 LEU182 THR183 TYR184 GLU185 LYS186 LEU187 ASN188 HIS189 ASP190 LEU191 TYR192 TRP193 GLN194 ILE195 THR196 LEU197 ASP198 ALA199 HIS200 VAL201 GLY202 ASN203 ILE204 MET205 LEU206 GLU207 LYS208 ALA209 ASN210 CYS211 ILE212 VAL213 ASP214 SER215 GLY216 THR217 SER218 ALA219 ILE220 THR221 VAL222 PRO223 THR224 ASP225 PHE226 LEU227 ASN228 LYS229 MET230 LEU231 GLN232 ASN233 LEU234 ASP235 VAL236 ILE237 LYS238 VAL239 PRO240 PHE241 LEU242 PRO243 PHE244 TYR245 VAL246 THR247 LEU248 CYS249 ASN250 ASN251 SER252 LYS253 LEU254 PRO255 THR256 PHE257 GLU258 PHE259 THR260 SER261 GLU262 ASN263 GLY264 LYS265 TYR266 THR267 LEU268 GLU269 PRO270 GLU271 TYR272 TYR273 LEU274 GLN275 HIS276 ILE277 GLU278 ASP279 VAL280 GLY281 PRO282 GLY283 LEU284 CYS285 MET286 LEU287 ASN288 ILE289 ILE290 GLY291 LEU292 ASP293 PHE294 PRO295 VAL296 PRO297 THR298 PHE299 ILE300 LEU301 GLY302 ASP303 PRO304 PHE305 MET306 ARG307 LYS308 TYR309 PHE310 THR311 VAL312 PHE313 ASP314 TYR315 ASP316 ASN317 HIS318 SER319 VAL320 GLY321 ILE322 ALA323 LEU324 ALA325 LYS326 LYS327 ASN328
Unit 3 VAL9 ASP10 PHE11 GLN12 ASN13 ILE14 MET15 PHE16 TYR17 GLY18 ASP19 ALA20 GLU21 VAL22 GLY23 ASP24 ASN25 GLN26 GLN27 PRO28 PHE29 THR30 PHE31 ILE32 LEU33 ASP34 THR35 GLY36 SER37 ALA38 ASN39 LEU40 TRP41 VAL42 PRO43 SER44 VAL45 LYS46 CYS47 THR48 THR49 ALA50 GLY51 CYS52 LEU53 THR54 LYS55 HIS56 LEU57 TYR58 ASP59 SER60 SER61 LYS62 SER63 ARG64 THR65 TYR66 GLU67 LYS68 ASP69 GLY70 THR71 LYS72 VAL73 GLU74 MET75 GLU78P HIS79P LEU80P THR81P VAL82 ILE82P SER83 GLY83P GLY84 PHE84P PHE85 LYS85P PHE86 VAL86P SER87 GLU87P LYS88 ASN88P ASP89 ALA89P LEU90 HIS90P VAL91 ASP91P THR92 ARG92P VAL93 ILE93P GLY94 LEU94P ASN95 LYS95P LEU96 THR96P SER97 ILE97P LEU98 LYS98P PRO99 THR99P TYR100 HIS100P LYS101 LYS101P PHE102 LEU102P ILE103 LYS103P GLU104 ASN104P VAL105 TYR105P ILE106 ILE106P ASP107 LYS107P THR108 GLU108P ASN109 SER109P GLY110 VAL110P PHE111 ASN111P GLU112 PHE112P PRO113 LEU113P THR114 ASN114P TYR115 SER115P THR116 GLY116P ALA117 LEU117P SER118 THR118P THR119 PHE120 ASP121 GLY122 ILE123 LEU124 GLY125 LEU126 GLY127 TRP128 LYS129 ASP130 LEU131 SER132 ILE133 GLY134 SER135 VAL136 ASP137 PRO138 ILE139 VAL140 VAL141 GLU142 LEU143 LYS144 ASN145 GLN146 ASN147 LYS148 ILE149 GLU150 ASN151 ALA152 LEU153 PHE154 THR155 PHE156 TYR157 LEU158 PRO159 VAL160 HIS161 ASP162 LYS163 HIS164 THR165 GLY166 PHE167 LEU168 THR169 ILE170 GLY171 GLY172 ILE173 GLU174 GLU175 ARG176 PHE177 TYR178 GLU179 GLY180 PRO181 LEU182 THR183 TYR184 GLU185 LYS186 LEU187 ASN188 HIS189 ASP190 LEU191 TYR192 TRP193 GLN194 ILE195 THR196 LEU197 ASP198 ALA199 HIS200 VAL201 GLY202 ASN203 ILE204 MET205 LEU206 GLU207 LYS208 ALA209 ASN210 CYS211 ILE212 VAL213 ASP214 SER215 GLY216 THR217 SER218 ALA219 ILE220 THR221 VAL222 PRO223 THR224 ASP225 PHE226 LEU227 ASN228 LYS229 MET230 LEU231 GLN232 ASN233 LEU234 ASP235 VAL236 ILE237 LYS238 VAL239 PRO240 PHE241 LEU242 PRO243 PHE244 TYR245 VAL246 THR247 LEU248 CYS249 ASN250 ASN251 SER252 LYS253 LEU254 PRO255 THR256 PHE257 GLU258 PHE259 THR260 SER261 GLU262 ASN263 GLY264 LYS265 TYR266 THR267 LEU268 GLU269 PRO270 GLU271 TYR272 TYR273 LEU274 GLN275 HIS276 ILE277 GLU278 ASP279 VAL280 GLY281 PRO282 GLY283 LEU284 CYS285 MET286 LEU287 ASN288 ILE289 ILE290 GLY291 LEU292 ASP293 PHE294 PRO295 VAL296 PRO297 THR298 PHE299 ILE300 LEU301 GLY302 ASP303 PRO304 PHE305 MET306 ARG307 LYS308 TYR309 PHE310 THR311 VAL312 PHE313 ASP314 TYR315 ASP316 ASN317 HIS318 SER319 VAL320 GLY321 ILE322 ALA323 LEU324 ALA325 LYS326 LYS327 ASN328 LEU329
Unit 4 SER1 SER2 ASN3 ASP4 ASN5 ILE6 GLU7 LEU8 VAL9 ASP10 PHE11 GLN12 ASN13 ILE14 MET15 PHE16 TYR17 GLY18 ASP19 ALA20 GLU21 VAL22 GLY23 ASP24 ASN25 GLN26 GLN27 PRO28 PHE29 THR30 PHE31 ILE32 LEU33 ASP34 THR35 GLY36 SER37 ALA38 ASN39 LEU40 TRP41 VAL42 PRO43 SER44 VAL45 LYS46 CYS47 THR48 THR49 ALA50 GLY51 CYS52 LEU53 THR54 LYS55 HIS56 LEU57 TYR58 ASP59 SER60 SER61 LYS62 SER63 ARG64 THR65 TYR66 GLU67 LYS68 ASP69 GLY70 THR71 LYS72 VAL73 GLU74 MET75 HIS79P LEU80P THR81P VAL82 ILE82P SER83 GLY83P GLY84 PHE84P PHE85 LYS85P PHE86 VAL86P SER87 GLU87P LYS88 ASN88P ASP89 ALA89P LEU90 HIS90P VAL91 ASP91P THR92 ARG92P VAL93 ILE93P GLY94 LEU94P ASN95 LYS95P LEU96 THR96P SER97 ILE97P LEU98 LYS98P PRO99 THR99P TYR100 HIS100P LYS101 LYS101P PHE102 LEU102P ILE103 LYS103P GLU104 ASN104P VAL105 TYR105P ILE106 ILE106P ASP107 LYS107P THR108 GLU108P ASN109 SER109P GLY110 VAL110P PHE111 ASN111P GLU112 PHE112P PRO113 LEU113P THR114 ASN114P TYR115 SER115P THR116 GLY116P ALA117 LEU117P SER118 THR118P THR119 LYS119P PHE120 THR120P ASP121 ASN121P GLY122 TYR122P ILE123 LEU123P LEU124 GLY124P GLY125 LEU126 GLY127 TRP128 LYS129 ASP130 LEU131 SER132 ILE133 GLY134 SER135 VAL136 ASP137 PRO138 ILE139 VAL140 VAL141 GLU142 LEU143 LYS144 ASN145 GLN146 ASN147 LYS148 ILE149 GLU150 ASN151 ALA152 LEU153 PHE154 THR155 PHE156 TYR157 LEU158 PRO159 VAL160 HIS161 ASP162 LYS163 HIS164 THR165 GLY166 PHE167 LEU168 THR169 ILE170 GLY171 GLY172 ILE173 GLU174 GLU175 ARG176 PHE177 TYR178 GLU179 GLY180 PRO181 LEU182 THR183 TYR184 GLU185 LYS186 LEU187 ASN188 HIS189 ASP190 LEU191 TYR192 TRP193 GLN194 ILE195 THR196 LEU197 ASP198 ALA199 HIS200 VAL201 GLY202 ASN203 ILE204 MET205 LEU206 GLU207 LYS208 ALA209 ASN210 CYS211 ILE212 VAL213 ASP214 SER215 GLY216 THR217 SER218 ALA219 ILE220 THR221 VAL222 PRO223 THR224 ASP225 PHE226 LEU227 ASN228 LYS229 MET230 LEU231 GLN232 ASN233 LEU234 ASP235 VAL236 ILE237 LYS238 VAL239 PRO240 PHE241 LEU242 PRO243 PHE244 TYR245 VAL246 THR247 LEU248 CYS249 ASN250 ASN251 SER252 LYS253 LEU254 PRO255 THR256 PHE257 GLU258 PHE259 THR260 SER261 GLU262 ASN263 GLY264 LYS265 TYR266 THR267 LEU268 GLU269 PRO270 GLU271 TYR272 TYR273 LEU274 GLN275 HIS276 ILE277 GLU278 ASP279 VAL280 GLY281 PRO282 GLY283 LEU284 CYS285 MET286 LEU287 ASN288 ILE289 ILE290 GLY291 LEU292 ASP293 PHE294 PRO295 VAL296 PRO297 THR298 PHE299 ILE300 LEU301 GLY302 ASP303 PRO304 PHE305 MET306 ARG307 LYS308 TYR309 PHE310 THR311 VAL312 PHE313 ASP314 TYR315 ASP316 ASN317 HIS318 SER319 VAL320 GLY321 ILE322 ALA323 LEU324 ALA325 LYS326 LYS327 ASN328 LEU329

Ligands
Unit 5 GOL330 GOL331 GOL332
Unit 6 GOL330 GOL331
Unit 7 GOL330

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany