1PDL - Sequence, Chains, Asymmetric and Biological Units

• Title: FITTING OF GP5 IN THE CRYOEM RECONSTRUCTION OF THE BACTERIOP BASEPLATE
• Keywords: HYDROLASE
• Experiment: ELECTRON MICROSCOPY
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1PDL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TAIL-ASSOCIATED LYSOZYME	A	554	554	0
2	Protein	TAIL-ASSOCIATED LYSOZYME	B	554	554	0
3	Protein	TAIL-ASSOCIATED LYSOZYME	C	554	554	0
total				1662	1662	0

Proteins

Unit 1	ASN 6 ASN 7 LEU 8 ASN 9 TRP 10 PHE 11 VAL 12 GLY 13 VAL 14 VAL 15 GLU 16 ASP 17 ARG 18 MET 19 ASP 20 PRO 21 LEU 22 LYS 23 LEU 24 GLY 25 ARG 26 VAL 27 ARG 28 VAL 29 ARG 30 VAL 31 VAL 32 GLY 33 LEU 34 HIS 35 PRO 36 PRO 37 GLN 38 ARG 39 ALA 40 GLN 41 GLY 42 ASP 43 VAL 44 MET 45 GLY 46 ILE 47 PRO 48 THR 49 GLU 50 LYS 51 LEU 52 PRO 53 TRP 54 MET 55 SER 56 VAL 57 ILE 58 GLN 59 PRO 60 ILE 61 THR 62 SER 63 ALA 64 ALA 65 MET 66 SER 67 GLY 68 ILE 69 GLY 70 GLY 71 SER 72 VAL 73 THR 74 GLY 75 PRO 76 VAL 77 GLU 78 GLY 79 THR 80 ARG 81 VAL 82 TYR 83 GLY 84 HIS 85 PHE 86 LEU 87 ASP 88 LYS 89 TRP 90 LYS 91 THR 92 ASN 93 GLY 94 ILE 95 VAL 96 LEU 97 GLY 98 THR 99 TYR 100 GLY 101 GLY 102 ILE 103 VAL 104 ARG 105 GLU 106 LYS 107 PRO 108 ASN 109 ARG 110 LEU 111 GLU 112 GLY 113 PHE 114 SER 115 ASP 116 PRO 117 THR 118 GLY 119 GLN 120 TYR 121 PRO 122 ARG 123 ARG 124 LEU 125 GLY 126 ASN 127 ASP 128 THR 129 ASN 130 VAL 131 LEU 132 ASN 133 GLN 134 GLY 135 GLY 136 GLU 137 VAL 138 GLY 139 TYR 140 ASP 141 SER 142 SER 143 SER 144 ASN 145 VAL 146 ILE 147 GLN 148 ASP 149 SER 150 ASN 151 LEU 152 ASP 153 THR 154 ALA 155 ILE 156 ASN 157 PRO 158 ASP 159 ASP 160 ARG 161 PRO 162 LEU 163 SER 164 GLU 165 ILE 166 PRO 167 THR 168 ASP 169 ASP 170 ASN 171 PRO 172 ASN 173 MET 174 SER 175 MET 176 ALA 177 GLU 178 MET 179 LEU 180 ARG 181 ARG 182 ASP 183 GLU 184 GLY 185 LEU 186 ARG 187 LEU 188 LYS 189 VAL 190 TYR 191 TRP 192 ASP 193 THR 194 GLU 195 GLY 196 TYR 197 PRO 198 THR 199 ILE 200 GLY 201 ILE 202 GLY 203 HIS 204 LEU 205 ILE 206 MET 207 LYS 208 GLN 209 PRO 210 VAL 211 ARG 212 ASP 213 MET 214 ALA 215 GLN 216 ILE 217 ASN 218 LYS 219 VAL 220 LEU 221 SER 222 LYS 223 GLN 224 VAL 225 GLY 226 ARG 227 GLU 228 ILE 229 THR 230 GLY 231 ASN 232 PRO 233 GLY 234 SER 235 ILE 236 THR 237 MET 238 GLU 239 GLU 240 ALA 241 THR 242 THR 243 LEU 244 PHE 245 GLU 246 ARG 247 ASP 248 LEU 249 ALA 250 ASP 251 MET 252 GLN 253 ARG 254 ASP 255 ILE 256 LYS 257 SER 258 HIS 259 SER 260 LYS 261 VAL 262 GLY 263 PRO 264 VAL 265 TRP 266 GLN 267 ALA 268 VAL 269 ASN 270 ARG 271 SER 272 ARG 273 GLN 274 MET 275 ALA 276 LEU 277 GLU 278 ASN 279 MET 280 ALA 281 PHE 282 GLN 283 MET 284 GLY 285 VAL 286 GLY 287 GLY 288 VAL 289 ALA 290 LYS 291 PHE 292 ASN 293 THR 294 MET 295 LEU 296 THR 297 ALA 298 MET 299 LEU 300 ALA 301 GLY 302 ASP 303 TRP 304 GLU 305 LYS 306 ALA 307 TYR 308 LYS 309 ALA 310 GLY 311 ARG 312 ASP 313 SER 314 LEU 315 TRP 316 TYR 317 GLN 318 GLN 319 THR 320 LYS 321 GLY 322 ARG 323 ALA 324 SER 325 ARG 326 VAL 327 THR 328 MET 329 ILE 330 ILE 331 LEU 332 THR 333 GLY 334 ASN 335 LEU 336 GLU 337 SER 338 TYR 339 GLY 340 VAL 341 GLU 342 VAL 343 LYS 344 THR 345 ASP 362 PRO 363 ALA 364 ASP 365 PRO 366 PRO 367 ILE 368 PRO 369 ASN 370 ASP 371 SER 372 ARG 373 ILE 374 LEU 375 PHE 376 LYS 377 GLU 378 PRO 379 VAL 380 SER 381 SER 382 TYR 383 LYS 384 GLY 385 GLU 386 TYR 387 PRO 388 TYR 389 VAL 390 HIS 391 THR 392 MET 393 GLU 394 THR 395 GLU 396 SER 397 GLY 398 HIS 399 ILE 400 GLN 401 GLU 402 PHE 403 ASP 404 ASP 405 THR 406 PRO 407 GLY 408 GLN 409 GLU 410 ARG 411 TYR 412 ARG 413 LEU 414 VAL 415 HIS 416 PRO 417 THR 418 GLY 419 THR 420 TYR 421 GLU 422 GLU 423 VAL 424 SER 425 PRO 426 SER 427 GLY 428 ARG 429 ARG 430 THR 431 ARG 432 LYS 433 THR 434 VAL 435 ASP 436 ASN 437 LEU 438 TYR 439 ASP 440 ILE 441 THR 442 ASN 443 ALA 444 ASP 445 GLY 446 ASN 447 PHE 448 LEU 449 VAL 450 ALA 451 GLY 452 ASP 453 LYS 454 LYS 455 THR 456 ASN 457 VAL 458 GLY 459 GLY 460 SER 461 GLU 462 ILE 463 TYR 464 TYR 465 ASN 466 MET 467 ASP 468 ASN 469 ARG 470 LEU 471 HIS 472 GLN 473 ILE 474 ASP 475 GLY 476 SER 477 ASN 478 THR 479 ILE 480 PHE 481 VAL 482 ARG 483 GLY 484 ASP 485 GLU 486 THR 487 LYS 488 THR 489 VAL 490 GLU 491 GLY 492 ASN 493 GLY 494 THR 495 ILE 496 LEU 497 VAL 498 LYS 499 GLY 500 ASN 501 VAL 502 THR 503 ILE 504 ILE 505 VAL 506 GLU 507 GLY 508 ASN 509 ALA 510 ASP 511 ILE 512 THR 513 VAL 514 LYS 515 GLY 516 ASP 517 ALA 518 THR 519 THR 520 LEU 521 VAL 522 GLU 523 GLY 524 ASN 525 GLN 526 THR 527 ASN 528 THR 529 VAL 530 ASN 531 GLY 532 ASN 533 LEU 534 SER 535 TRP 536 LYS 537 VAL 538 ALA 539 GLY 540 THR 541 VAL 542 ASP 543 TRP 544 ASP 545 VAL 546 GLY 547 GLY 548 ASP 549 TRP 550 THR 551 GLU 552 LYS 553 MET 554 ALA 555 SER 556 MET 557 SER 558 SER 559 ILE 560 SER 561 SER 562 GLY 563 GLN 564 TYR 565 THR 566 ILE 567 ASP 568 GLY 569 SER 570 ARG 571 ILE 572 ASP 573 ILE 574 GLY 575
Unit 2	ASN 6 ASN 7 LEU 8 ASN 9 TRP 10 PHE 11 VAL 12 GLY 13 VAL 14 VAL 15 GLU 16 ASP 17 ARG 18 MET 19 ASP 20 PRO 21 LEU 22 LYS 23 LEU 24 GLY 25 ARG 26 VAL 27 ARG 28 VAL 29 ARG 30 VAL 31 VAL 32 GLY 33 LEU 34 HIS 35 PRO 36 PRO 37 GLN 38 ARG 39 ALA 40 GLN 41 GLY 42 ASP 43 VAL 44 MET 45 GLY 46 ILE 47 PRO 48 THR 49 GLU 50 LYS 51 LEU 52 PRO 53 TRP 54 MET 55 SER 56 VAL 57 ILE 58 GLN 59 PRO 60 ILE 61 THR 62 SER 63 ALA 64 ALA 65 MET 66 SER 67 GLY 68 ILE 69 GLY 70 GLY 71 SER 72 VAL 73 THR 74 GLY 75 PRO 76 VAL 77 GLU 78 GLY 79 THR 80 ARG 81 VAL 82 TYR 83 GLY 84 HIS 85 PHE 86 LEU 87 ASP 88 LYS 89 TRP 90 LYS 91 THR 92 ASN 93 GLY 94 ILE 95 VAL 96 LEU 97 GLY 98 THR 99 TYR 100 GLY 101 GLY 102 ILE 103 VAL 104 ARG 105 GLU 106 LYS 107 PRO 108 ASN 109 ARG 110 LEU 111 GLU 112 GLY 113 PHE 114 SER 115 ASP 116 PRO 117 THR 118 GLY 119 GLN 120 TYR 121 PRO 122 ARG 123 ARG 124 LEU 125 GLY 126 ASN 127 ASP 128 THR 129 ASN 130 VAL 131 LEU 132 ASN 133 GLN 134 GLY 135 GLY 136 GLU 137 VAL 138 GLY 139 TYR 140 ASP 141 SER 142 SER 143 SER 144 ASN 145 VAL 146 ILE 147 GLN 148 ASP 149 SER 150 ASN 151 LEU 152 ASP 153 THR 154 ALA 155 ILE 156 ASN 157 PRO 158 ASP 159 ASP 160 ARG 161 PRO 162 LEU 163 SER 164 GLU 165 ILE 166 PRO 167 THR 168 ASP 169 ASP 170 ASN 171 PRO 172 ASN 173 MET 174 SER 175 MET 176 ALA 177 GLU 178 MET 179 LEU 180 ARG 181 ARG 182 ASP 183 GLU 184 GLY 185 LEU 186 ARG 187 LEU 188 LYS 189 VAL 190 TYR 191 TRP 192 ASP 193 THR 194 GLU 195 GLY 196 TYR 197 PRO 198 THR 199 ILE 200 GLY 201 ILE 202 GLY 203 HIS 204 LEU 205 ILE 206 MET 207 LYS 208 GLN 209 PRO 210 VAL 211 ARG 212 ASP 213 MET 214 ALA 215 GLN 216 ILE 217 ASN 218 LYS 219 VAL 220 LEU 221 SER 222 LYS 223 GLN 224 VAL 225 GLY 226 ARG 227 GLU 228 ILE 229 THR 230 GLY 231 ASN 232 PRO 233 GLY 234 SER 235 ILE 236 THR 237 MET 238 GLU 239 GLU 240 ALA 241 THR 242 THR 243 LEU 244 PHE 245 GLU 246 ARG 247 ASP 248 LEU 249 ALA 250 ASP 251 MET 252 GLN 253 ARG 254 ASP 255 ILE 256 LYS 257 SER 258 HIS 259 SER 260 LYS 261 VAL 262 GLY 263 PRO 264 VAL 265 TRP 266 GLN 267 ALA 268 VAL 269 ASN 270 ARG 271 SER 272 ARG 273 GLN 274 MET 275 ALA 276 LEU 277 GLU 278 ASN 279 MET 280 ALA 281 PHE 282 GLN 283 MET 284 GLY 285 VAL 286 GLY 287 GLY 288 VAL 289 ALA 290 LYS 291 PHE 292 ASN 293 THR 294 MET 295 LEU 296 THR 297 ALA 298 MET 299 LEU 300 ALA 301 GLY 302 ASP 303 TRP 304 GLU 305 LYS 306 ALA 307 TYR 308 LYS 309 ALA 310 GLY 311 ARG 312 ASP 313 SER 314 LEU 315 TRP 316 TYR 317 GLN 318 GLN 319 THR 320 LYS 321 GLY 322 ARG 323 ALA 324 SER 325 ARG 326 VAL 327 THR 328 MET 329 ILE 330 ILE 331 LEU 332 THR 333 GLY 334 ASN 335 LEU 336 GLU 337 SER 338 TYR 339 GLY 340 VAL 341 GLU 342 VAL 343 LYS 344 THR 345 ASP 362 PRO 363 ALA 364 ASP 365 PRO 366 PRO 367 ILE 368 PRO 369 ASN 370 ASP 371 SER 372 ARG 373 ILE 374 LEU 375 PHE 376 LYS 377 GLU 378 PRO 379 VAL 380 SER 381 SER 382 TYR 383 LYS 384 GLY 385 GLU 386 TYR 387 PRO 388 TYR 389 VAL 390 HIS 391 THR 392 MET 393 GLU 394 THR 395 GLU 396 SER 397 GLY 398 HIS 399 ILE 400 GLN 401 GLU 402 PHE 403 ASP 404 ASP 405 THR 406 PRO 407 GLY 408 GLN 409 GLU 410 ARG 411 TYR 412 ARG 413 LEU 414 VAL 415 HIS 416 PRO 417 THR 418 GLY 419 THR 420 TYR 421 GLU 422 GLU 423 VAL 424 SER 425 PRO 426 SER 427 GLY 428 ARG 429 ARG 430 THR 431 ARG 432 LYS 433 THR 434 VAL 435 ASP 436 ASN 437 LEU 438 TYR 439 ASP 440 ILE 441 THR 442 ASN 443 ALA 444 ASP 445 GLY 446 ASN 447 PHE 448 LEU 449 VAL 450 ALA 451 GLY 452 ASP 453 LYS 454 LYS 455 THR 456 ASN 457 VAL 458 GLY 459 GLY 460 SER 461 GLU 462 ILE 463 TYR 464 TYR 465 ASN 466 MET 467 ASP 468 ASN 469 ARG 470 LEU 471 HIS 472 GLN 473 ILE 474 ASP 475 GLY 476 SER 477 ASN 478 THR 479 ILE 480 PHE 481 VAL 482 ARG 483 GLY 484 ASP 485 GLU 486 THR 487 LYS 488 THR 489 VAL 490 GLU 491 GLY 492 ASN 493 GLY 494 THR 495 ILE 496 LEU 497 VAL 498 LYS 499 GLY 500 ASN 501 VAL 502 THR 503 ILE 504 ILE 505 VAL 506 GLU 507 GLY 508 ASN 509 ALA 510 ASP 511 ILE 512 THR 513 VAL 514 LYS 515 GLY 516 ASP 517 ALA 518 THR 519 THR 520 LEU 521 VAL 522 GLU 523 GLY 524 ASN 525 GLN 526 THR 527 ASN 528 THR 529 VAL 530 ASN 531 GLY 532 ASN 533 LEU 534 SER 535 TRP 536 LYS 537 VAL 538 ALA 539 GLY 540 THR 541 VAL 542 ASP 543 TRP 544 ASP 545 VAL 546 GLY 547 GLY 548 ASP 549 TRP 550 THR 551 GLU 552 LYS 553 MET 554 ALA 555 SER 556 MET 557 SER 558 SER 559 ILE 560 SER 561 SER 562 GLY 563 GLN 564 TYR 565 THR 566 ILE 567 ASP 568 GLY 569 SER 570 ARG 571 ILE 572 ASP 573 ILE 574 GLY 575
Unit 3	ASN 6 ASN 7 LEU 8 ASN 9 TRP 10 PHE 11 VAL 12 GLY 13 VAL 14 VAL 15 GLU 16 ASP 17 ARG 18 MET 19 ASP 20 PRO 21 LEU 22 LYS 23 LEU 24 GLY 25 ARG 26 VAL 27 ARG 28 VAL 29 ARG 30 VAL 31 VAL 32 GLY 33 LEU 34 HIS 35 PRO 36 PRO 37 GLN 38 ARG 39 ALA 40 GLN 41 GLY 42 ASP 43 VAL 44 MET 45 GLY 46 ILE 47 PRO 48 THR 49 GLU 50 LYS 51 LEU 52 PRO 53 TRP 54 MET 55 SER 56 VAL 57 ILE 58 GLN 59 PRO 60 ILE 61 THR 62 SER 63 ALA 64 ALA 65 MET 66 SER 67 GLY 68 ILE 69 GLY 70 GLY 71 SER 72 VAL 73 THR 74 GLY 75 PRO 76 VAL 77 GLU 78 GLY 79 THR 80 ARG 81 VAL 82 TYR 83 GLY 84 HIS 85 PHE 86 LEU 87 ASP 88 LYS 89 TRP 90 LYS 91 THR 92 ASN 93 GLY 94 ILE 95 VAL 96 LEU 97 GLY 98 THR 99 TYR 100 GLY 101 GLY 102 ILE 103 VAL 104 ARG 105 GLU 106 LYS 107 PRO 108 ASN 109 ARG 110 LEU 111 GLU 112 GLY 113 PHE 114 SER 115 ASP 116 PRO 117 THR 118 GLY 119 GLN 120 TYR 121 PRO 122 ARG 123 ARG 124 LEU 125 GLY 126 ASN 127 ASP 128 THR 129 ASN 130 VAL 131 LEU 132 ASN 133 GLN 134 GLY 135 GLY 136 GLU 137 VAL 138 GLY 139 TYR 140 ASP 141 SER 142 SER 143 SER 144 ASN 145 VAL 146 ILE 147 GLN 148 ASP 149 SER 150 ASN 151 LEU 152 ASP 153 THR 154 ALA 155 ILE 156 ASN 157 PRO 158 ASP 159 ASP 160 ARG 161 PRO 162 LEU 163 SER 164 GLU 165 ILE 166 PRO 167 THR 168 ASP 169 ASP 170 ASN 171 PRO 172 ASN 173 MET 174 SER 175 MET 176 ALA 177 GLU 178 MET 179 LEU 180 ARG 181 ARG 182 ASP 183 GLU 184 GLY 185 LEU 186 ARG 187 LEU 188 LYS 189 VAL 190 TYR 191 TRP 192 ASP 193 THR 194 GLU 195 GLY 196 TYR 197 PRO 198 THR 199 ILE 200 GLY 201 ILE 202 GLY 203 HIS 204 LEU 205 ILE 206 MET 207 LYS 208 GLN 209 PRO 210 VAL 211 ARG 212 ASP 213 MET 214 ALA 215 GLN 216 ILE 217 ASN 218 LYS 219 VAL 220 LEU 221 SER 222 LYS 223 GLN 224 VAL 225 GLY 226 ARG 227 GLU 228 ILE 229 THR 230 GLY 231 ASN 232 PRO 233 GLY 234 SER 235 ILE 236 THR 237 MET 238 GLU 239 GLU 240 ALA 241 THR 242 THR 243 LEU 244 PHE 245 GLU 246 ARG 247 ASP 248 LEU 249 ALA 250 ASP 251 MET 252 GLN 253 ARG 254 ASP 255 ILE 256 LYS 257 SER 258 HIS 259 SER 260 LYS 261 VAL 262 GLY 263 PRO 264 VAL 265 TRP 266 GLN 267 ALA 268 VAL 269 ASN 270 ARG 271 SER 272 ARG 273 GLN 274 MET 275 ALA 276 LEU 277 GLU 278 ASN 279 MET 280 ALA 281 PHE 282 GLN 283 MET 284 GLY 285 VAL 286 GLY 287 GLY 288 VAL 289 ALA 290 LYS 291 PHE 292 ASN 293 THR 294 MET 295 LEU 296 THR 297 ALA 298 MET 299 LEU 300 ALA 301 GLY 302 ASP 303 TRP 304 GLU 305 LYS 306 ALA 307 TYR 308 LYS 309 ALA 310 GLY 311 ARG 312 ASP 313 SER 314 LEU 315 TRP 316 TYR 317 GLN 318 GLN 319 THR 320 LYS 321 GLY 322 ARG 323 ALA 324 SER 325 ARG 326 VAL 327 THR 328 MET 329 ILE 330 ILE 331 LEU 332 THR 333 GLY 334 ASN 335 LEU 336 GLU 337 SER 338 TYR 339 GLY 340 VAL 341 GLU 342 VAL 343 LYS 344 THR 345 ASP 362 PRO 363 ALA 364 ASP 365 PRO 366 PRO 367 ILE 368 PRO 369 ASN 370 ASP 371 SER 372 ARG 373 ILE 374 LEU 375 PHE 376 LYS 377 GLU 378 PRO 379 VAL 380 SER 381 SER 382 TYR 383 LYS 384 GLY 385 GLU 386 TYR 387 PRO 388 TYR 389 VAL 390 HIS 391 THR 392 MET 393 GLU 394 THR 395 GLU 396 SER 397 GLY 398 HIS 399 ILE 400 GLN 401 GLU 402 PHE 403 ASP 404 ASP 405 THR 406 PRO 407 GLY 408 GLN 409 GLU 410 ARG 411 TYR 412 ARG 413 LEU 414 VAL 415 HIS 416 PRO 417 THR 418 GLY 419 THR 420 TYR 421 GLU 422 GLU 423 VAL 424 SER 425 PRO 426 SER 427 GLY 428 ARG 429 ARG 430 THR 431 ARG 432 LYS 433 THR 434 VAL 435 ASP 436 ASN 437 LEU 438 TYR 439 ASP 440 ILE 441 THR 442 ASN 443 ALA 444 ASP 445 GLY 446 ASN 447 PHE 448 LEU 449 VAL 450 ALA 451 GLY 452 ASP 453 LYS 454 LYS 455 THR 456 ASN 457 VAL 458 GLY 459 GLY 460 SER 461 GLU 462 ILE 463 TYR 464 TYR 465 ASN 466 MET 467 ASP 468 ASN 469 ARG 470 LEU 471 HIS 472 GLN 473 ILE 474 ASP 475 GLY 476 SER 477 ASN 478 THR 479 ILE 480 PHE 481 VAL 482 ARG 483 GLY 484 ASP 485 GLU 486 THR 487 LYS 488 THR 489 VAL 490 GLU 491 GLY 492 ASN 493 GLY 494 THR 495 ILE 496 LEU 497 VAL 498 LYS 499 GLY 500 ASN 501 VAL 502 THR 503 ILE 504 ILE 505 VAL 506 GLU 507 GLY 508 ASN 509 ALA 510 ASP 511 ILE 512 THR 513 VAL 514 LYS 515 GLY 516 ASP 517 ALA 518 THR 519 THR 520 LEU 521 VAL 522 GLU 523 GLY 524 ASN 525 GLN 526 THR 527 ASN 528 THR 529 VAL 530 ASN 531 GLY 532 ASN 533 LEU 534 SER 535 TRP 536 LYS 537 VAL 538 ALA 539 GLY 540 THR 541 VAL 542 ASP 543 TRP 544 ASP 545 VAL 546 GLY 547 GLY 548 ASP 549 TRP 550 THR 551 GLU 552 LYS 553 MET 554 ALA 555 SER 556 MET 557 SER 558 SER 559 ILE 560 SER 561 SER 562 GLY 563 GLN 564 TYR 565 THR 566 ILE 567 ASP 568 GLY 569 SER 570 ARG 571 ILE 572 ASP 573 ILE 574 GLY 575