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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL AND FUNCTIONAL IMPORTANCE OF FIRST-SHELL METAL LI THE BINUCLEAR MANGANESE CLUSTER OF ARGINASE I.
Keywords HYDROLASE, UREA CYCLE, ARGININE METABOLISM, BINUCLEAR MANGAN CLUSTER
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1P8N     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ARGINASE 1  A 314 2393 0
2  Protein   ARGINASE 1  B 314 2393 0
3  Protein   ARGINASE 1  C 314 2393 0
4  Ligand   ARGINASE 1  A 2 0 7
5  Ligand   ARGINASE 1  B 1 0 1
6  Ligand   ARGINASE 1  C 1 0 1
7 Water     52 0 52
total       998 7179 61

Proteins
Unit 1 LYS6 PRO7 ILE8 GLU9 ILE10 ILE11 GLY12 ALA13 PRO14 PHE15 SER16 LYS17 GLY18 GLN19 PRO20 ARG21 GLY22 GLY23 VAL24 GLU25 LYS26 GLY27 PRO28 ALA29 ALA30 LEU31 ARG32 LYS33 ALA34 GLY35 LEU36 VAL37 GLU38 LYS39 LEU40 LYS41 GLU42 THR43 GLU44 TYR45 ASN46 VAL47 ARG48 ASP49 HIS50 GLY51 ASP52 LEU53 ALA54 PHE55 VAL56 ASP57 VAL58 PRO59 ASN60 ASP61 SER62 PRO63 PHE64 GLN65 ILE66 VAL67 LYS68 ASN69 PRO70 ARG71 SER72 VAL73 GLY74 LYS75 ALA76 ASN77 GLU78 GLN79 LEU80 ALA81 ALA82 VAL83 VAL84 ALA85 GLU86 THR87 GLN88 LYS89 ASN90 GLY91 THR92 ILE93 SER94 VAL95 VAL96 LEU97 GLY98 GLY99 ASP100 HIS101 SER102 MET103 ALA104 ILE105 GLY106 SER107 ILE108 SER109 GLY110 HIS111 ALA112 ARG113 VAL114 HIS115 PRO116 ASP117 LEU118 CYS119 VAL120 ILE121 TRP122 VAL123 ASP124 ALA125 HIS126 THR127 ASP128 ILE129 ASN130 THR131 PRO132 LEU133 THR134 THR135 SER136 SER137 GLY138 ASN139 LEU140 HIS141 GLY142 GLN143 PRO144 VAL145 ALA146 PHE147 LEU148 LEU149 LYS150 GLU151 LEU152 LYS153 GLY154 LYS155 PHE156 PRO157 ASP158 VAL159 PRO160 GLY161 PHE162 SER163 TRP164 VAL165 THR166 PRO167 CYS168 ILE169 SER170 ALA171 LYS172 ASP173 ILE174 VAL175 TYR176 ILE177 GLY178 LEU179 ARG180 ASP181 VAL182 ASP183 PRO184 GLY185 GLU186 HIS187 TYR188 ILE189 ILE190 LYS191 THR192 LEU193 GLY194 ILE195 LYS196 TYR197 PHE198 SER199 MET200 THR201 GLU202 VAL203 ASP204 LYS205 LEU206 GLY207 ILE208 GLY209 LYS210 VAL211 MET212 GLU213 GLU214 THR215 PHE216 SER217 TYR218 LEU219 LEU220 GLY221 ARG222 LYS223 LYS224 ARG225 PRO226 ILE227 HIS228 LEU229 SER230 PHE231 ALA232 VAL233 ASP234 GLY235 LEU236 ASP237 PRO238 VAL239 PHE240 THR241 PRO242 ALA243 THR244 GLY245 THR246 PRO247 VAL248 VAL249 GLY250 GLY251 LEU252 SER253 TYR254 ARG255 GLU256 GLY257 LEU258 TYR259 ILE260 THR261 GLU262 GLU263 ILE264 TYR265 LYS266 THR267 GLY268 LEU269 LEU270 SER271 GLY272 LEU273 ASP274 ILE275 MET276 GLU277 VAL278 ASN279 PRO280 THR281 LEU282 GLY283 LYS284 THR285 PRO286 GLU287 GLU288 VAL289 THR290 ARG291 THR292 VAL293 ASN294 THR295 ALA296 VAL297 ALA298 LEU299 THR300 LEU301 SER302 CYS303 PHE304 GLY305 THR306 LYS307 ARG308 GLU309 GLY310 ASN311 HIS312 LYS313 PRO314 GLU315 THR316 ASP317 TYR318 LEU319
Unit 2 LYS6 PRO7 ILE8 GLU9 ILE10 ILE11 GLY12 ALA13 PRO14 PHE15 SER16 LYS17 GLY18 GLN19 PRO20 ARG21 GLY22 GLY23 VAL24 GLU25 LYS26 GLY27 PRO28 ALA29 ALA30 LEU31 ARG32 LYS33 ALA34 GLY35 LEU36 VAL37 GLU38 LYS39 LEU40 LYS41 GLU42 THR43 GLU44 TYR45 ASN46 VAL47 ARG48 ASP49 HIS50 GLY51 ASP52 LEU53 ALA54 PHE55 VAL56 ASP57 VAL58 PRO59 ASN60 ASP61 SER62 PRO63 PHE64 GLN65 ILE66 VAL67 LYS68 ASN69 PRO70 ARG71 SER72 VAL73 GLY74 LYS75 ALA76 ASN77 GLU78 GLN79 LEU80 ALA81 ALA82 VAL83 VAL84 ALA85 GLU86 THR87 GLN88 LYS89 ASN90 GLY91 THR92 ILE93 SER94 VAL95 VAL96 LEU97 GLY98 GLY99 ASP100 HIS101 SER102 MET103 ALA104 ILE105 GLY106 SER107 ILE108 SER109 GLY110 HIS111 ALA112 ARG113 VAL114 HIS115 PRO116 ASP117 LEU118 CYS119 VAL120 ILE121 TRP122 VAL123 ASP124 ALA125 HIS126 THR127 ASP128 ILE129 ASN130 THR131 PRO132 LEU133 THR134 THR135 SER136 SER137 GLY138 ASN139 LEU140 HIS141 GLY142 GLN143 PRO144 VAL145 ALA146 PHE147 LEU148 LEU149 LYS150 GLU151 LEU152 LYS153 GLY154 LYS155 PHE156 PRO157 ASP158 VAL159 PRO160 GLY161 PHE162 SER163 TRP164 VAL165 THR166 PRO167 CYS168 ILE169 SER170 ALA171 LYS172 ASP173 ILE174 VAL175 TYR176 ILE177 GLY178 LEU179 ARG180 ASP181 VAL182 ASP183 PRO184 GLY185 GLU186 HIS187 TYR188 ILE189 ILE190 LYS191 THR192 LEU193 GLY194 ILE195 LYS196 TYR197 PHE198 SER199 MET200 THR201 GLU202 VAL203 ASP204 LYS205 LEU206 GLY207 ILE208 GLY209 LYS210 VAL211 MET212 GLU213 GLU214 THR215 PHE216 SER217 TYR218 LEU219 LEU220 GLY221 ARG222 LYS223 LYS224 ARG225 PRO226 ILE227 HIS228 LEU229 SER230 PHE231 ALA232 VAL233 ASP234 GLY235 LEU236 ASP237 PRO238 VAL239 PHE240 THR241 PRO242 ALA243 THR244 GLY245 THR246 PRO247 VAL248 VAL249 GLY250 GLY251 LEU252 SER253 TYR254 ARG255 GLU256 GLY257 LEU258 TYR259 ILE260 THR261 GLU262 GLU263 ILE264 TYR265 LYS266 THR267 GLY268 LEU269 LEU270 SER271 GLY272 LEU273 ASP274 ILE275 MET276 GLU277 VAL278 ASN279 PRO280 THR281 LEU282 GLY283 LYS284 THR285 PRO286 GLU287 GLU288 VAL289 THR290 ARG291 THR292 VAL293 ASN294 THR295 ALA296 VAL297 ALA298 LEU299 THR300 LEU301 SER302 CYS303 PHE304 GLY305 THR306 LYS307 ARG308 GLU309 GLY310 ASN311 HIS312 LYS313 PRO314 GLU315 THR316 ASP317 TYR318 LEU319
Unit 3 LYS6 PRO7 ILE8 GLU9 ILE10 ILE11 GLY12 ALA13 PRO14 PHE15 SER16 LYS17 GLY18 GLN19 PRO20 ARG21 GLY22 GLY23 VAL24 GLU25 LYS26 GLY27 PRO28 ALA29 ALA30 LEU31 ARG32 LYS33 ALA34 GLY35 LEU36 VAL37 GLU38 LYS39 LEU40 LYS41 GLU42 THR43 GLU44 TYR45 ASN46 VAL47 ARG48 ASP49 HIS50 GLY51 ASP52 LEU53 ALA54 PHE55 VAL56 ASP57 VAL58 PRO59 ASN60 ASP61 SER62 PRO63 PHE64 GLN65 ILE66 VAL67 LYS68 ASN69 PRO70 ARG71 SER72 VAL73 GLY74 LYS75 ALA76 ASN77 GLU78 GLN79 LEU80 ALA81 ALA82 VAL83 VAL84 ALA85 GLU86 THR87 GLN88 LYS89 ASN90 GLY91 THR92 ILE93 SER94 VAL95 VAL96 LEU97 GLY98 GLY99 ASP100 HIS101 SER102 MET103 ALA104 ILE105 GLY106 SER107 ILE108 SER109 GLY110 HIS111 ALA112 ARG113 VAL114 HIS115 PRO116 ASP117 LEU118 CYS119 VAL120 ILE121 TRP122 VAL123 ASP124 ALA125 HIS126 THR127 ASP128 ILE129 ASN130 THR131 PRO132 LEU133 THR134 THR135 SER136 SER137 GLY138 ASN139 LEU140 HIS141 GLY142 GLN143 PRO144 VAL145 ALA146 PHE147 LEU148 LEU149 LYS150 GLU151 LEU152 LYS153 GLY154 LYS155 PHE156 PRO157 ASP158 VAL159 PRO160 GLY161 PHE162 SER163 TRP164 VAL165 THR166 PRO167 CYS168 ILE169 SER170 ALA171 LYS172 ASP173 ILE174 VAL175 TYR176 ILE177 GLY178 LEU179 ARG180 ASP181 VAL182 ASP183 PRO184 GLY185 GLU186 HIS187 TYR188 ILE189 ILE190 LYS191 THR192 LEU193 GLY194 ILE195 LYS196 TYR197 PHE198 SER199 MET200 THR201 GLU202 VAL203 ASP204 LYS205 LEU206 GLY207 ILE208 GLY209 LYS210 VAL211 MET212 GLU213 GLU214 THR215 PHE216 SER217 TYR218 LEU219 LEU220 GLY221 ARG222 LYS223 LYS224 ARG225 PRO226 ILE227 HIS228 LEU229 SER230 PHE231 ALA232 VAL233 ASP234 GLY235 LEU236 ASP237 PRO238 VAL239 PHE240 THR241 PRO242 ALA243 THR244 GLY245 THR246 PRO247 VAL248 VAL249 GLY250 GLY251 LEU252 SER253 TYR254 ARG255 GLU256 GLY257 LEU258 TYR259 ILE260 THR261 GLU262 GLU263 ILE264 TYR265 LYS266 THR267 GLY268 LEU269 LEU270 SER271 GLY272 LEU273 ASP274 ILE275 MET276 GLU277 VAL278 ASN279 PRO280 THR281 LEU282 GLY283 LYS284 THR285 PRO286 GLU287 GLU288 VAL289 THR290 ARG291 THR292 VAL293 ASN294 THR295 ALA296 VAL297 ALA298 LEU299 THR300 LEU301 SER302 CYS303 PHE304 GLY305 THR306 LYS307 ARG308 GLU309 GLY310 ASN311 HIS312 LYS313 PRO314 GLU315 THR316 ASP317 TYR318 LEU319

Ligands
Unit 4 MN500 GOL1000
Unit 5 MN501
Unit 6 MN502

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany