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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BARLEY ALPHA-AMYLASE ISOZYME 1 (AMY1) I WITH THE SUBSTRATE ANALOGUE, METHYL 4I,4II,4III-TRI- THIOMALTOTETRAOSIDE (THIO-DP4)
Keywords ALPHA-AMYLASE, BARLEY, ISOZYME 1, BETA-ALPHA-BARREL, SUGAR T BINDING SITE, SUBSTRATE ANALOGUE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1P6W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN (ALPHA-AMYLASE TYPE A ISOZYME)  A 404 3140 0
2  Ligand    B 4 0 46
3  Ligand    C 2 0 23
4  Ligand    D 2 0 23
5  Ligand   PROTEIN (ALPHA-AMYLASE TYPE A ISOZYME)  A 4 0 4
6 Water     641 0 641
total       1057 3140 737

Proteins
Unit 1 HIS1 GLN2 VAL3 LEU4 PHE5 GLN6 GLY7 PHE8 ASN9 TRP10 GLU11 SER12 TRP13 LYS14 GLN15 SER16 GLY17 GLY18 TRP19 TYR20 ASN21 MET22 MET23 MET24 GLY25 LYS26 VAL27 ASP28 ASP29 ILE30 ALA31 ALA32 ALA33 GLY34 VAL35 THR36 HIS37 VAL38 TRP39 LEU40 PRO41 PRO42 PRO43 SER44 HIS45 SER46 VAL47 SER48 ASN49 GLU50 GLY51 TYR52 MET53 PRO54 GLY55 ARG56 LEU57 TYR58 ASP59 ILE60 ASP61 ALA62 SER63 LYS64 TYR65 GLY66 ASN67 ALA68 ALA69 GLU70 LEU71 LYS72 SER73 LEU74 ILE75 GLY76 ALA77 LEU78 HIS79 GLY80 LYS81 GLY82 VAL83 GLN84 ALA85 ILE86 ALA87 ASP88 ILE89 VAL90 ILE91 ASN92 HIS93 ARG94 CYS95 ALA96 ASP97 TYR98 LYS99 ASP100 SER101 ARG102 GLY103 ILE104 TYR105 CYS106 ILE107 PHE108 GLU109 GLY110 GLY111 THR112 SER113 ASP114 GLY115 ARG116 LEU117 ASP118 TRP119 GLY120 PRO121 HIS122 MET123 ILE124 CYS125 ARG126 ASP127 ASP128 THR129 LYS130 TYR131 SER132 ASP133 GLY134 THR135 ALA136 ASN137 LEU138 ASP139 THR140 GLY141 ALA142 ASP143 PHE144 ALA145 ALA146 ALA147 PRO148 ASP149 ILE150 ASP151 HIS152 LEU153 ASN154 ASP155 ARG156 VAL157 GLN158 ARG159 GLU160 LEU161 LYS162 GLU163 TRP164 LEU165 LEU166 TRP167 LEU168 LYS169 SER170 ASP171 LEU172 GLY173 PHE174 ASP175 ALA176 TRP177 ARG178 LEU179 ASP180 PHE181 ALA182 ARG183 GLY184 TYR185 SER186 PRO187 GLU188 MET189 ALA190 LYS191 VAL192 TYR193 ILE194 ASP195 GLY196 THR197 SER198 PRO199 SER200 LEU201 ALA202 VAL203 ALA204 GLU205 VAL206 TRP207 ASP208 ASN209 MET210 ALA211 THR212 GLY213 GLY214 ASP215 GLY216 LYS217 PRO218 ASN219 TYR220 ASP221 GLN222 ASP223 ALA224 HIS225 ARG226 GLN227 ASN228 LEU229 VAL230 ASN231 TRP232 VAL233 ASP234 LYS235 VAL236 GLY237 GLY238 ALA239 ALA240 SER241 ALA242 GLY243 MET244 VAL245 PHE246 ASP247 PHE248 THR249 THR250 LYS251 GLY252 ILE253 LEU254 ASN255 ALA256 ALA257 VAL258 GLU259 GLY260 GLU261 LEU262 TRP263 ARG264 LEU265 ILE266 ASP267 PRO268 GLN269 GLY270 LYS271 ALA272 PRO273 GLY274 VAL275 MET276 GLY277 TRP278 TRP279 PRO280 ALA281 LYS282 ALA283 VAL284 THR285 PHE286 VAL287 ASP288 ASN289 HIS290 ASP291 THR292 GLY293 SER294 THR295 GLN296 ALA297 MET298 TRP299 PRO300 PHE301 PRO302 SER303 ASP304 LYS305 VAL306 MET307 GLN308 GLY309 TYR310 ALA311 TYR312 ILE313 LEU314 THR315 HIS316 PRO317 GLY318 ILE319 PRO320 CYS321 ILE322 PHE323 TYR324 ASP325 HIS326 PHE327 PHE328 ASN329 TRP330 GLY331 PHE332 LYS333 ASP334 GLN335 ILE336 ALA337 ALA338 LEU339 VAL340 ALA341 ILE342 ARG343 LYS344 ARG345 ASN346 GLY347 ILE348 THR349 ALA350 THR351 SER352 ALA353 LEU354 LYS355 ILE356 LEU357 MET358 HIS359 GLU360 GLY361 ASP362 ALA363 TYR364 VAL365 ALA366 GLU367 ILE368 ASP369 GLY370 LYS371 VAL372 VAL373 VAL374 LYS375 ILE376 GLY377 SER378 ARG379 TYR380 ASP381 VAL382 GLY383 ALA384 VAL385 ILE386 PRO387 ALA388 GLY389 PHE390 VAL391 THR392 SER393 ALA394 HIS395 GLY396 ASN397 ASP398 TYR399 ALA400 VAL401 TRP402 GLU403 LYS404

Ligands
Unit 2 GTM1 SGC2 SGC3 BGC4
Unit 3 SGC1 GLC2
Unit 4 SGC1 GLC2
Unit 5 CA500 CA501 CA502 CA503

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany