Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title MECHANISM OF UBIQUITIN RECOGNITION BY THE CUE DOMAIN OF VPS9
Keywords TRAFFICKING, POST TRANSLATIONAL MODIFICATION, MONO-UBIQUITIN TRANSLATION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1P3Q     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS9  Q 45 326 16
2  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS9  R 36 249 16
3  Protein   UBIQUITIN  U 74 593 0
4  Protein   UBIQUITIN  V 73 582 0
5 Water     176 0 176
total       404 1750 208

Proteins
Unit 1 SER398 SER399 LEU400 ILE401 LYS402 LYS403 ILE404 GLU405 GLU406 ASN407 GLU408 ARG409 LYS410 ASP411 THR412 LEU413 ASN414 THR415 LEU416 GLN417 ASN418 MSE419 PHE420 PRO421 ASP422 MSE423 ASP424 PRO425 SER426 LEU427 ILE428 GLU429 ASP430 VAL431 CYS432 ILE433 ALA434 ALA435 ALA436 SER437 GLY440 PRO441 CYS442 VAL443 ASP444
Unit 2 LEU416 GLN417 ASN418 MSE419 PHE420 PRO421 ASP422 MSE423 ASP424 PRO425 SER426 LEU427 ILE428 GLU429 ASP430 VAL431 CYS432 ILE433 ALA434 ALA435 ALA436 SER437 ARG438 ILE439 GLY440 PRO441 CYS442 VAL443 ASP444 ALA445 LEU446 LEU447 SER448 LEU449 SER450 GLU451
Unit 3 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73 ARG74
Unit 4 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany