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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE ANALYSIS OF AN ANTI-LYSOZYME ANTIBODY
Keywords MONOCLONAL ANTIBODY IGG1, KAPPA ANTIBODY/ANTIGEN COMPLEX, IMMUNE SYSTEM/HYDROLASE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1P2C     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LIGHT CHAIN ANTI-LYSOZYME ANTIBODY F10.6.6  A 212 1639 0
2  Protein   HEAVY CHAIN VH+CH1 ANTI-LYSOZYME ANTIBODY F10.6.6  B 210 1592 0
3  Protein   LYSOZYME C  C 129 1001 0
4  Protein   LIGHT CHAIN ANTI-LYSOZYME ANTIBODY F10.6.6  D 211 1630 0
5  Protein   HEAVY CHAIN VH+CH1 ANTI-LYSOZYME ANTIBODY F10.6.6  E 211 1600 0
6  Protein   LYSOZYME C  F 129 1001 0
7 Water     887 0 887
total       1989 8463 887

Proteins
Unit 1 ASP1 ILE2 GLU3 LEU4 THR5 GLN6 SER7 PRO8 ALA9 THR10 LEU11 SER12 VAL13 THR14 PRO15 GLY16 ASP17 SER18 VAL19 SER20 LEU21 SER22 CYS23 ARG24 ALA25 SER26 GLN27 SER28 ILE29 SER30 ASN31 ASN32 LEU33 HIS34 TRP35 TYR36 GLN37 GLN38 LYS39 SER40 HIS41 GLU42 SER43 PRO44 ARG45 LEU46 LEU47 ILE48 LYS49 TYR50 THR51 SER52 GLN53 SER54 MET55 SER56 GLY57 ILE58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 SER74 ILE75 ASN76 SER77 VAL78 GLU79 THR80 GLU81 ASP82 PHE83 GLY84 VAL85 TYR86 PHE87 CYS88 GLN89 GLN90 SER91 GLY92 SER93 TRP94 PRO95 ARG96 THR97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 ASP105 ILE106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLN124 LEU125 THR126 SER127 GLY128 GLY129 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ASP184 GLU185 TYR186 GLU187 ARG188 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 HIS198 LYS199 THR200 SER201 THR202 SER203 PRO204 ILE205 VAL206 LYS207 SER208 PHE209 ASN210 ARG211 ASN212
Unit 2 GLU301 VAL302 GLN303 LEU304 GLN305 GLU306 SER307 GLY308 ALA309 GLU310 LEU311 MET312 LYS313 PRO314 GLY315 ALA316 SER317 VAL318 LYS319 ILE320 SER321 CYS322 LYS323 ALA324 THR325 GLY326 TYR327 THR328 PHE329 THR330 THR331 TYR332 TRP333 ILE334 GLU335 TRP336 ILE337 LYS338 GLN339 ARG340 PRO341 GLY342 HIS343 SER344 LEU345 GLU346 TRP347 ILE348 GLY349 GLU350 ILE351 LEU352 PRO353 GLY354 SER355 ASP356 SER357 THR358 TYR359 TYR360 ASN361 GLU362 LYS363 VAL364 LYS365 GLY366 LYS367 VAL368 THR369 PHE370 THR371 ALA372 ASP373 ALA374 SER375 SER376 ASN377 THR378 ALA379 TYR380 MET381 GLN382 LEU383 SER384 SER385 LEU386 THR387 SER388 GLU389 ASP390 SER391 ALA392 VAL393 TYR394 TYR395 CYS396 ALA397 ARG398 GLY399 ASP400 GLY401 PHE402 TYR403 VAL404 TYR405 TRP406 GLY407 GLN408 GLY409 THR410 THR411 LEU412 THR413 VAL414 SER415 SER416 ALA417 SER418 THR419 THR420 PRO421 PRO422 SER423 VAL424 TYR425 PRO426 LEU427 ALA428 PRO429 GLY430 SER437 MET438 VAL439 THR440 LEU441 GLY442 CYS443 LEU444 VAL445 LYS446 GLY447 TYR448 PHE449 PRO450 GLU451 PRO452 VAL453 THR454 VAL455 THR456 TRP457 ASN458 SER459 GLY460 SER461 LEU462 SER463 SER464 GLY465 VAL466 HIS467 THR468 PHE469 PRO470 ALA471 VAL472 LEU473 GLN474 SER475 ASP476 LEU477 TYR478 THR479 LEU480 SER481 SER482 SER483 VAL484 THR485 VAL486 PRO487 SER488 SER489 PRO490 TRP491 PRO492 SER493 GLU494 THR495 VAL496 THR497 CYS498 ASN499 VAL500 ALA501 HIS502 PRO503 ALA504 SER505 SER506 THR507 LYS508 VAL509 ASP510 LYS511 LYS512 ILE513 VAL514 PRO515 ARG516
Unit 3 LYS601 VAL602 PHE603 GLY604 ARG605 CYS606 GLU607 LEU608 ALA609 ALA610 ALA611 MET612 LYS613 ARG614 HIS615 GLY616 LEU617 ASP618 ASN619 TYR620 ARG621 GLY622 TYR623 SER624 LEU625 GLY626 ASN627 TRP628 VAL629 CYS630 ALA631 ALA632 LYS633 PHE634 GLU635 SER636 ASN637 PHE638 ASN639 THR640 GLN641 ALA642 THR643 ASN644 ARG645 ASN646 THR647 ASP648 GLY649 SER650 THR651 ASP652 TYR653 GLY654 ILE655 LEU656 GLN657 ILE658 ASN659 SER660 ARG661 TRP662 TRP663 CYS664 ASN665 ASP666 GLY667 ARG668 THR669 PRO670 GLY671 SER672 ARG673 ASN674 LEU675 CYS676 ASN677 ILE678 PRO679 CYS680 SER681 ALA682 LEU683 LEU684 SER685 SER686 ASP687 ILE688 THR689 ALA690 SER691 VAL692 ASN693 CYS694 ALA695 LYS696 LYS697 ILE698 VAL699 SER700 ASP701 GLY702 ASN703 GLY704 MET705 ASN706 ALA707 TRP708 VAL709 ALA710 TRP711 ARG712 ASN713 ARG714 CYS715 LYS716 GLY717 THR718 ASP719 VAL720 GLN721 ALA722 TRP723 ILE724 ARG725 GLY726 CYS727 ARG728 LEU729
Unit 4 ASP901 ILE902 GLU903 LEU904 THR905 GLN906 SER907 PRO908 ALA909 THR910 LEU911 SER912 VAL913 THR914 PRO915 GLY916 ASP917 SER918 VAL919 SER920 LEU921 SER922 CYS923 ARG924 ALA925 SER926 GLN927 SER928 ILE929 SER930 ASN931 ASN932 LEU933 HIS934 TRP935 TYR936 GLN937 GLN938 LYS939 SER940 HIS941 GLU942 SER943 PRO944 ARG945 LEU946 LEU947 ILE948 LYS949 TYR950 THR951 SER952 GLN953 SER954 MET955 SER956 GLY957 ILE958 PRO959 SER960 ARG961 PHE962 SER963 GLY964 SER965 GLY966 SER967 GLY968 THR969 ASP970 PHE971 THR972 LEU973 SER974 ILE975 ASN976 SER977 VAL978 GLU979 THR980 GLU981 ASP982 PHE983 GLY984 VAL985 TYR986 PHE987 CYS988 GLN989 GLN990 SER991 GLY992 SER993 TRP994 PRO995 ARG996 THR997 PHE998 GLY999 GLY1000 GLY1001 THR1002 LYS1003 LEU1004 ASP1005 ILE1006 LYS1007 ARG1008 ALA1009 ASP1010 ALA1011 ALA1012 PRO1013 THR1014 VAL1015 SER1016 ILE1017 PHE1018 PRO1019 PRO1020 SER1021 SER1022 GLU1023 GLN1024 LEU1025 THR1026 SER1027 GLY1028 GLY1029 ALA1030 SER1031 VAL1032 VAL1033 CYS1034 PHE1035 LEU1036 ASN1037 ASN1038 PHE1039 TYR1040 PRO1041 LYS1042 ASP1043 ILE1044 ASN1045 VAL1046 LYS1047 TRP1048 LYS1049 ILE1050 ASP1051 GLY1052 SER1053 GLU1054 ARG1055 GLN1056 ASN1057 GLY1058 VAL1059 LEU1060 ASN1061 SER1062 TRP1063 THR1064 ASP1065 GLN1066 ASP1067 SER1068 LYS1069 ASP1070 SER1071 THR1072 TYR1073 SER1074 MET1075 SER1076 SER1077 THR1078 LEU1079 THR1080 LEU1081 THR1082 LYS1083 ASP1084 GLU1085 TYR1086 GLU1087 ARG1088 HIS1089 ASN1090 SER1091 TYR1092 THR1093 CYS1094 GLU1095 ALA1096 THR1097 HIS1098 LYS1099 THR1100 SER1101 THR1102 SER1103 PRO1104 ILE1105 VAL1106 LYS1107 SER1108 PHE1109 ASN1110 ARG1111
Unit 5 GLU1201 VAL1202 GLN1203 LEU1204 GLN1205 GLU1206 SER1207 GLY1208 ALA1209 GLU1210 LEU1211 MET1212 LYS1213 PRO1214 GLY1215 ALA1216 SER1217 VAL1218 LYS1219 ILE1220 SER1221 CYS1222 LYS1223 ALA1224 THR1225 GLY1226 TYR1227 THR1228 PHE1229 THR1230 THR1231 TYR1232 TRP1233 ILE1234 GLU1235 TRP1236 ILE1237 LYS1238 GLN1239 ARG1240 PRO1241 GLY1242 HIS1243 SER1244 LEU1245 GLU1246 TRP1247 ILE1248 GLY1249 GLU1250 ILE1251 LEU1252 PRO1253 GLY1254 SER1255 ASP1256 SER1257 THR1258 TYR1259 TYR1260 ASN1261 GLU1262 LYS1263 VAL1264 LYS1265 GLY1266 LYS1267 VAL1268 THR1269 PHE1270 THR1271 ALA1272 ASP1273 ALA1274 SER1275 SER1276 ASN1277 THR1278 ALA1279 TYR1280 MET1281 GLN1282 LEU1283 SER1284 SER1285 LEU1286 THR1287 SER1288 GLU1289 ASP1290 SER1291 ALA1292 VAL1293 TYR1294 TYR1295 CYS1296 ALA1297 ARG1298 GLY1299 ASP1300 GLY1301 PHE1302 TYR1303 VAL1304 TYR1305 TRP1306 GLY1307 GLN1308 GLY1309 THR1310 THR1311 LEU1312 THR1313 VAL1314 SER1315 SER1316 ALA1317 SER1318 THR1319 THR1320 PRO1321 PRO1322 SER1323 VAL1324 TYR1325 PRO1326 LEU1327 ALA1328 PRO1329 GLY1330 SER1337 MET1338 VAL1339 THR1340 LEU1341 GLY1342 CYS1343 LEU1344 VAL1345 LYS1346 GLY1347 TYR1348 PHE1349 PRO1350 GLU1351 PRO1352 VAL1353 THR1354 VAL1355 THR1356 TRP1357 ASN1358 SER1359 GLY1360 SER1361 LEU1362 SER1363 SER1364 GLY1365 VAL1366 HIS1367 THR1368 PHE1369 PRO1370 ALA1371 VAL1372 LEU1373 GLN1374 SER1375 ASP1376 LEU1377 TYR1378 THR1379 LEU1380 SER1381 SER1382 SER1383 VAL1384 THR1385 VAL1386 PRO1387 SER1388 SER1389 PRO1390 TRP1391 PRO1392 SER1393 GLU1394 THR1395 VAL1396 THR1397 CYS1398 ASN1399 VAL1400 ALA1401 HIS1402 PRO1403 ALA1404 SER1405 SER1406 THR1407 LYS1408 VAL1409 ASP1410 LYS1411 LYS1412 ILE1413 VAL1414 PRO1415 ARG1416 ASP1417
Unit 6 LYS1501 VAL1502 PHE1503 GLY1504 ARG1505 CYS1506 GLU1507 LEU1508 ALA1509 ALA1510 ALA1511 MET1512 LYS1513 ARG1514 HIS1515 GLY1516 LEU1517 ASP1518 ASN1519 TYR1520 ARG1521 GLY1522 TYR1523 SER1524 LEU1525 GLY1526 ASN1527 TRP1528 VAL1529 CYS1530 ALA1531 ALA1532 LYS1533 PHE1534 GLU1535 SER1536 ASN1537 PHE1538 ASN1539 THR1540 GLN1541 ALA1542 THR1543 ASN1544 ARG1545 ASN1546 THR1547 ASP1548 GLY1549 SER1550 THR1551 ASP1552 TYR1553 GLY1554 ILE1555 LEU1556 GLN1557 ILE1558 ASN1559 SER1560 ARG1561 TRP1562 TRP1563 CYS1564 ASN1565 ASP1566 GLY1567 ARG1568 THR1569 PRO1570 GLY1571 SER1572 ARG1573 ASN1574 LEU1575 CYS1576 ASN1577 ILE1578 PRO1579 CYS1580 SER1581 ALA1582 LEU1583 LEU1584 SER1585 SER1586 ASP1587 ILE1588 THR1589 ALA1590 SER1591 VAL1592 ASN1593 CYS1594 ALA1595 LYS1596 LYS1597 ILE1598 VAL1599 SER1600 ASP1601 GLY1602 ASN1603 GLY1604 MET1605 ASN1606 ALA1607 TRP1608 VAL1609 ALA1610 TRP1611 ARG1612 ASN1613 ARG1614 CYS1615 LYS1616 GLY1617 THR1618 ASP1619 VAL1620 GLN1621 ALA1622 TRP1623 ILE1624 ARG1625 GLY1626 CYS1627 ARG1628 LEU1629

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany