1OOP - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF SWINE VESICULAR DISEASE VIRUS
• Keywords: PICORNAVIRUS STRUCTURE, VIRUS/VIRAL PROTEIN, VIRUS-RECEPTOR INTERACTIONS, HOST ADAPTATION, CAR, DAF, COXSACKIEVIRUS, IC VIRUS, VIRUS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1OOP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	COAT PROTEIN VP1	A	271	2140	0
2	Protein	COAT PROTEIN VP2	B	252	1942	0
3	Protein	COAT PROTEIN VP3	C	238	1829	0
4	Protein	COAT PROTEIN VP4	D	58	452	0
5	Ligand	COAT PROTEIN VP1	A	1	0	21
6	Ligand	COAT PROTEIN VP4	D	1	0	15
total				821	6363	36

Proteins

Unit 1	ARG 13 VAL 14 ALA 15 ASP 16 THR 17 ILE 18 GLY 19 SER 20 GLY 21 PRO 22 VAL 23 ASN 24 SER 25 GLU 26 SER 27 ILE 28 PRO 29 ALA 30 LEU 31 THR 32 ALA 33 ALA 34 GLU 35 THR 36 GLY 37 HIS 38 THR 39 SER 40 GLN 41 VAL 42 VAL 43 PRO 44 SER 45 ASP 46 THR 47 MET 48 GLN 49 THR 50 ARG 51 HIS 52 VAL 53 LYS 54 ASN 55 TYR 56 HIS 57 SER 58 ARG 59 SER 60 GLU 61 SER 62 THR 63 VAL 64 GLU 65 ASN 66 PHE 67 LEU 68 CYS 69 ARG 70 SER 71 ALA 72 CYS 73 VAL 74 PHE 75 TYR 76 THR 77 THR 78 TYR 79 GLU 80 ASN 81 HIS 82 ASP 83 SER 84 ASP 85 GLY 86 ASP 87 ASN 88 PHE 89 ALA 90 TYR 91 TRP 92 VAL 93 ILE 94 ASN 95 THR 96 ARG 97 GLN 98 VAL 99 ALA 100 GLN 101 LEU 102 ARG 103 ARG 104 LYS 105 LEU 106 GLU 107 MET 108 PHE 109 THR 110 TYR 111 ALA 112 ARG 113 PHE 114 ASP 115 LEU 116 GLU 117 LEU 118 THR 119 PHE 120 VAL 121 ILE 122 THR 123 SER 124 THR 125 GLN 126 GLU 127 GLN 128 PRO 129 THR 130 VAL 131 ARG 132 GLY 133 GLN 134 ASP 135 ALA 136 PRO 137 VAL 138 LEU 139 THR 140 HIS 141 GLN 142 ILE 143 MET 144 TYR 145 VAL 146 PRO 147 PRO 148 GLY 149 GLY 150 PRO 151 VAL 152 PRO 153 THR 154 LYS 155 VAL 156 ASN 157 SER 158 TYR 159 SER 160 TRP 161 GLN 162 THR 163 SER 164 THR 165 ASN 166 PRO 167 SER 168 VAL 169 PHE 170 TRP 171 THR 172 GLU 173 GLY 174 SER 175 ALA 176 PRO 177 PRO 178 ARG 179 MET 180 SER 181 VAL 182 PRO 183 PHE 184 ILE 185 GLY 186 ILE 187 GLY 188 ASN 189 ALA 190 TYR 191 SER 192 MET 193 PHE 194 TYR 195 ASP 196 GLY 197 TRP 198 ALA 199 ARG 200 PHE 201 ASP 202 LYS 203 GLN 204 GLY 205 THR 206 TYR 207 GLY 208 ILE 209 SER 210 THR 211 LEU 212 ASN 213 ASN 214 MET 215 GLY 216 THR 217 LEU 218 TYR 219 MET 220 ARG 221 HIS 222 VAL 223 ASN 224 ASP 225 GLY 226 GLY 227 PRO 228 GLY 229 PRO 230 ILE 231 VAL 232 SER 233 THR 234 VAL 235 ARG 236 ILE 237 TYR 238 PHE 239 LYS 240 PRO 241 LYS 242 HIS 243 VAL 244 LYS 245 THR 246 TRP 247 VAL 248 PRO 249 ARG 250 PRO 251 PRO 252 ARG 253 LEU 254 CYS 255 GLN 256 TYR 257 GLN 258 LYS 259 ALA 260 GLY 261 ASN 262 VAL 263 ASN 264 PHE 265 GLU 266 PRO 267 THR 268 GLY 269 VAL 270 THR 271 GLU 272 GLY 273 ARG 274 THR 275 ASP 276 ILE 277 THR 278 THR 279 MET 280 LYS 281 THR 282 THR 283
Unit 2	SER 10 ASP 11 ARG 12 VAL 13 ARG 14 SER 15 ILE 16 THR 17 LEU 18 GLY 19 ASN 20 SER 21 THR 22 ILE 23 THR 24 THR 25 GLN 26 GLU 27 CYS 28 ALA 29 ASN 30 VAL 31 VAL 32 VAL 33 GLY 34 TYR 35 GLY 36 VAL 37 TRP 38 PRO 39 THR 40 TYR 41 LEU 42 LYS 43 ASP 44 GLU 45 GLU 46 ALA 47 THR 48 ALA 49 GLU 50 ASP 51 GLN 52 PRO 53 THR 54 GLN 55 PRO 56 ASP 57 VAL 58 ALA 59 THR 60 CYS 61 ARG 62 PHE 63 TYR 64 THR 65 LEU 66 GLU 67 SER 68 VAL 69 MET 70 TRP 71 GLN 72 GLN 73 SER 74 SER 75 PRO 76 GLY 77 TRP 78 TRP 79 TRP 80 LYS 81 PHE 82 PRO 83 ASP 84 ALA 85 LEU 86 SER 87 ASN 88 MET 89 GLY 90 LEU 91 PHE 92 GLY 93 GLN 94 ASN 95 MET 96 GLN 97 TYR 98 HIS 99 TYR 100 LEU 101 GLY 102 ARG 103 ALA 104 GLY 105 TYR 106 THR 107 ILE 108 HIS 109 VAL 110 GLN 111 CYS 112 ASN 113 ALA 114 SER 115 LYS 116 PHE 117 HIS 118 GLN 119 GLY 120 CYS 121 LEU 122 LEU 123 VAL 124 VAL 125 CYS 126 VAL 127 PRO 128 GLU 129 ALA 130 GLU 131 MET 132 GLY 133 CYS 134 ALA 135 THR 136 LEU 137 ALA 138 ASN 139 LYS 140 PRO 141 ASP 142 PRO 143 LYS 144 SER 145 LEU 146 SER 147 LYS 148 GLY 149 GLU 150 ILE 151 ALA 152 ASN 153 MET 154 PHE 155 GLU 156 SER 157 GLN 158 ASN 159 SER 160 THR 161 GLY 162 GLU 163 THR 164 ALA 165 VAL 166 GLN 167 ALA 168 ASN 169 VAL 170 ILE 171 ASN 172 ALA 173 GLY 174 MET 175 GLY 176 VAL 177 GLY 178 VAL 179 GLY 180 ASN 181 LEU 182 THR 183 ILE 184 PHE 185 PRO 186 HIS 187 GLN 188 TRP 189 ILE 190 ASN 191 LEU 192 ARG 193 THR 194 ASN 195 ASN 196 SER 197 ALA 198 THR 199 ILE 200 VAL 201 MET 202 PRO 203 TYR 204 ILE 205 ASN 206 SER 207 VAL 208 PRO 209 MET 210 ASP 211 ASN 212 MET 213 PHE 214 ARG 215 HIS 216 ASN 217 ASN 218 PHE 219 THR 220 LEU 221 MET 222 VAL 223 ILE 224 PRO 225 PHE 226 ALA 227 PRO 228 LEU 229 SER 230 TYR 231 SER 232 THR 233 GLY 234 ALA 235 THR 236 THR 237 TYR 238 VAL 239 PRO 240 ILE 241 THR 242 VAL 243 THR 244 VAL 245 ALA 246 PRO 247 MET 248 CYS 249 ALA 250 GLU 251 TYR 252 ASN 253 GLY 254 LEU 255 ARG 256 LEU 257 ALA 258 GLY 259 LYS 260 GLN 261
Unit 3	GLY 1 LEU 2 PRO 3 THR 4 LEU 5 SER 6 THR 7 PRO 8 GLY 9 SER 10 ASN 11 GLN 12 PHE 13 LEU 14 THR 15 SER 16 ASP 17 ASP 18 PHE 19 GLN 20 SER 21 PRO 22 SER 23 ALA 24 MET 25 PRO 26 GLN 27 PHE 28 ASP 29 VAL 30 THR 31 PRO 32 GLU 33 MET 34 ASP 35 ILE 36 PRO 37 GLY 38 GLN 39 VAL 40 ASN 41 ASN 42 LEU 43 MET 44 GLU 45 ILE 46 ALA 47 GLU 48 VAL 49 ASP 50 SER 51 VAL 52 VAL 53 PRO 54 VAL 55 ASN 56 ASN 57 THR 58 GLU 59 GLY 60 LYS 61 VAL 62 MET 63 SER 64 ILE 65 GLU 66 ALA 67 TYR 68 GLN 69 ILE 70 PRO 71 VAL 72 GLN 73 SER 74 ASN 75 PRO 76 THR 77 ASN 78 GLY 79 SER 80 GLN 81 VAL 82 PHE 83 GLY 84 PHE 85 PRO 86 LEU 87 THR 88 PRO 89 GLY 90 ALA 91 ASN 92 SER 93 VAL 94 LEU 95 ASN 96 ARG 97 THR 98 LEU 99 LEU 100 GLY 101 GLU 102 ILE 103 LEU 104 ASN 105 TYR 106 TYR 107 ALA 108 HIS 109 TRP 110 SER 111 GLY 112 SER 113 ILE 114 LYS 115 LEU 116 THR 117 PHE 118 MET 119 PHE 120 CYS 121 GLY 122 SER 123 ALA 124 MET 125 ALA 126 THR 127 GLY 128 LYS 129 PHE 130 LEU 131 LEU 132 ALA 133 TYR 134 SER 135 PRO 136 PRO 137 GLY 138 ALA 139 GLY 140 ALA 141 PRO 142 THR 143 THR 144 ARG 145 LYS 146 GLU 147 ALA 148 MET 149 LEU 150 GLY 151 THR 152 HIS 153 VAL 154 ILE 155 TRP 156 ASP 157 VAL 158 GLY 159 LEU 160 GLN 161 SER 162 SER 163 CYS 164 VAL 165 LEU 166 CYS 167 ILE 168 PRO 169 TRP 170 ILE 171 SER 172 GLN 173 THR 174 HIS 175 TYR 176 ARG 177 TYR 178 VAL 179 VAL 180 MET 181 ASP 182 GLU 183 TYR 184 THR 185 ALA 186 GLY 187 GLY 188 TYR 189 ILE 190 THR 191 CYS 192 TRP 193 TYR 194 GLN 195 THR 196 ASN 197 ILE 198 VAL 199 VAL 200 PRO 201 ALA 202 ASP 203 ALA 204 GLN 205 SER 206 ASP 207 CYS 208 LYS 209 ILE 210 LEU 211 CYS 212 PHE 213 VAL 214 SER 215 ALA 216 CYS 217 ASN 218 ASP 219 PHE 220 SER 221 VAL 222 ARG 223 MET 224 LEU 225 LYS 226 ASP 227 THR 228 PRO 229 PHE 230 ILE 231 LYS 232 GLN 233 ASP 234 ASN 235 PHE 236 PHE 237 GLN 238
Unit 4	GLY 2 ALA 3 GLN 4 VAL 5 SER 6 THR 7 GLN 8 LYS 9 THR 10 GLY 11 ALA 12 HIS 13 GLU 14 ILE 25 HIS 26 TYR 27 THR 28 ASN 29 ILE 30 ASN 31 TYR 32 TYR 33 LYS 34 ASP 35 ALA 36 ALA 37 SER 38 ASN 39 SER 40 ALA 41 ASN 42 ARG 43 GLN 44 ASP 45 PHE 46 THR 47 GLN 48 ASP 49 PRO 50 GLY 51 LYS 52 PHE 53 THR 54 GLU 55 PRO 56 VAL 57 LYS 58 ASP 59 ILE 60 MET 61 VAL 62 LYS 63 SER 64 MET 65 PRO 66 ALA 67 LEU 68 ASN 69

Ligands

Unit 5	SPH 284
Unit 6	MYR 70