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Sequence, Chains, Asymmetric and Biological Units

Title ALPHA TOXIN FROM CLOSTRIDIUM ABSONUM
Keywords ZINC PHOSPHOLIPASE C, GAS GANGRENE DETERMINANT, MEMBRANE BINDING, CALCIUM BINDING, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1OLP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALPHA-TOXIN  A 370 3014 0
2  Protein   ALPHA-TOXIN  B 370 2976 0
3  Protein   ALPHA-TOXIN  C 370 2968 0
4  Protein   ALPHA-TOXIN  D 365 2952 0
5  Ligand   ALPHA-TOXIN  A 5 0 5
6  Ligand   ALPHA-TOXIN  B 5 0 5
7  Ligand   ALPHA-TOXIN  C 5 0 5
8  Ligand   ALPHA-TOXIN  D 5 0 5
9 Water     362 0 362
total       1857 11910 382

Proteins
Unit 1 TRP1 ASP2 GLY3 LYS4 GLU5 ASP6 GLY7 THR8 GLY9 THR10 HIS11 SER12 VAL13 ILE14 VAL15 THR16 GLN17 ALA18 ILE19 GLU20 MET21 LEU22 LYS23 HIS24 ASP25 LEU26 SER27 LYS28 ASP29 GLU30 PRO31 GLU32 ALA33 ILE34 ARG35 ASN36 ASP37 LEU38 SER39 ILE40 LEU41 GLU42 LYS43 ASN44 LEU45 HIS46 LYS47 PHE48 GLN49 LEU50 GLY51 SER52 THR53 PHE54 PRO55 ASP56 TYR57 ASP58 PRO59 ASN60 ALA61 TYR62 SER63 LEU64 TYR65 GLN66 ASP67 HIS68 PHE69 TRP70 ASP71 PRO72 ASP73 THR74 ASP75 HIS76 ASN77 PHE78 THR79 GLN80 ASP81 ASN82 LYS83 TRP84 TYR85 LEU86 SER87 TYR88 ALA89 VAL90 PRO91 ASP92 ASN93 ALA94 GLU95 SER96 GLN97 THR98 ARG99 LYS100 PHE101 ALA102 THR103 LEU104 ALA105 LYS106 ASN107 GLU108 TRP109 ASP110 LYS111 GLY112 ASN113 TYR114 GLU115 LYS116 ALA117 ALA118 TRP119 TYR120 LEU121 GLY122 GLN123 GLY124 MET125 HIS126 TYR127 PHE128 GLY129 ASP130 LEU131 ASN132 THR133 PRO134 TYR135 HIS136 ALA137 ALA138 ASN139 VAL140 THR141 ALA142 VAL143 ASP144 SER145 PRO146 GLY147 HIS148 VAL149 LYS150 PHE151 GLU152 THR153 TYR154 ALA155 GLU156 GLU157 ARG158 LYS159 ASP160 THR161 TYR162 ARG163 LEU164 ASP165 THR166 THR167 GLY168 TYR169 ASN170 THR171 ASP172 ASP173 ALA174 PHE175 TYR176 LYS177 ASP178 THR179 LEU180 LYS181 ASN182 ASP183 ASN184 PHE185 ASN186 GLU187 TRP188 SER189 LYS190 GLY191 TYR192 CYS193 LYS194 TYR195 TRP196 ALA197 LYS198 LYS199 ALA200 LYS201 ASN202 LEU203 TYR204 TYR205 SER206 HIS207 ALA208 THR209 MET210 SER211 ASN212 SER213 TRP214 ASP215 ASP216 TRP217 GLU218 TYR219 ALA220 ALA221 SER222 HIS223 GLY224 VAL225 GLY226 ASN227 ALA228 GLN229 LYS230 GLY231 VAL232 ALA233 GLY234 TYR235 LEU236 TYR237 ARG238 PHE239 LEU240 ASN241 ASP242 VAL243 SER244 ASN245 LYS246 ASP247 ALA248 VAL249 ASP250 LYS251 ASP252 TYR253 ASP254 LEU255 ASN256 GLU257 ILE258 VAL259 VAL260 MET261 ILE262 LYS263 THR264 ALA265 ASP266 VAL267 GLN268 ASP269 ALA270 GLY271 THR272 ASP273 ASN274 TYR275 ILE276 TYR277 PHE278 GLY279 ILE280 GLU281 THR282 LYS283 ASP284 GLY285 VAL286 LYS287 GLU288 GLU289 TRP290 ALA291 LEU292 ASP293 ASN294 PRO295 GLY296 ASN297 ASP298 PHE299 THR300 ARG301 ASN302 GLN303 GLU304 GLY305 THR306 TYR307 THR308 LEU309 LYS310 LEU311 LYS312 ASN313 LYS314 ASN315 THR316 LYS317 TYR318 SER319 ASP320 ILE321 LYS322 ASN323 MET324 TRP325 ILE326 ARG327 ASP328 GLU329 LYS330 LEU331 THR332 VAL333 ALA334 THR335 ASP336 GLY337 TRP338 LYS339 PRO340 SER341 TYR342 VAL343 LYS344 VAL345 ILE346 ALA347 GLY348 ASP349 LYS350 VAL351 ARG352 LEU353 GLU354 LYS355 ASN356 ILE357 ASN358 GLU359 TRP360 ILE361 SER362 GLY363 GLY364 THR365 THR366 TYR367 THR368 LEU369 LYS370
Unit 2 TRP1 ASP2 GLY3 LYS4 GLU5 ASP6 GLY7 THR8 GLY9 THR10 HIS11 SER12 VAL13 ILE14 VAL15 THR16 GLN17 ALA18 ILE19 GLU20 MET21 LEU22 LYS23 HIS24 ASP25 LEU26 SER27 LYS28 ASP29 GLU30 PRO31 GLU32 ALA33 ILE34 ARG35 ASN36 ASP37 LEU38 SER39 ILE40 LEU41 GLU42 LYS43 ASN44 LEU45 HIS46 LYS47 PHE48 GLN49 LEU50 GLY51 SER52 THR53 PHE54 PRO55 ASP56 TYR57 ASP58 PRO59 ASN60 ALA61 TYR62 SER63 LEU64 TYR65 GLN66 ASP67 HIS68 PHE69 TRP70 ASP71 PRO72 ASP73 THR74 ASP75 HIS76 ASN77 PHE78 THR79 GLN80 ASP81 ASN82 LYS83 TRP84 TYR85 LEU86 SER87 TYR88 ALA89 VAL90 PRO91 ASP92 ASN93 ALA94 GLU95 SER96 GLN97 THR98 ARG99 LYS100 PHE101 ALA102 THR103 LEU104 ALA105 LYS106 ASN107 GLU108 TRP109 ASP110 LYS111 GLY112 ASN113 TYR114 GLU115 LYS116 ALA117 ALA118 TRP119 TYR120 LEU121 GLY122 GLN123 GLY124 MET125 HIS126 TYR127 PHE128 GLY129 ASP130 LEU131 ASN132 THR133 PRO134 TYR135 HIS136 ALA137 ALA138 ASN139 VAL140 THR141 ALA142 VAL143 ASP144 SER145 PRO146 GLY147 HIS148 VAL149 LYS150 PHE151 GLU152 THR153 TYR154 ALA155 GLU156 GLU157 ARG158 LYS159 ASP160 THR161 TYR162 ARG163 LEU164 ASP165 THR166 THR167 GLY168 TYR169 ASN170 THR171 ASP172 ASP173 ALA174 PHE175 TYR176 LYS177 ASP178 THR179 LEU180 LYS181 ASN182 ASP183 ASN184 PHE185 ASN186 GLU187 TRP188 SER189 LYS190 GLY191 TYR192 CYS193 LYS194 TYR195 TRP196 ALA197 LYS198 LYS199 ALA200 LYS201 ASN202 LEU203 TYR204 TYR205 SER206 HIS207 ALA208 THR209 MET210 SER211 ASN212 SER213 TRP214 ASP215 ASP216 TRP217 GLU218 TYR219 ALA220 ALA221 SER222 HIS223 GLY224 VAL225 GLY226 ASN227 ALA228 GLN229 LYS230 GLY231 VAL232 ALA233 GLY234 TYR235 LEU236 TYR237 ARG238 PHE239 LEU240 ASN241 ASP242 VAL243 SER244 ASN245 LYS246 ASP247 ALA248 VAL249 ASP250 LYS251 ASP252 TYR253 ASP254 LEU255 ASN256 GLU257 ILE258 VAL259 VAL260 MET261 ILE262 LYS263 THR264 ALA265 ASP266 VAL267 GLN268 ASP269 ALA270 GLY271 THR272 ASP273 ASN274 TYR275 ILE276 TYR277 PHE278 GLY279 ILE280 GLU281 THR282 LYS283 ASP284 GLY285 VAL286 LYS287 GLU288 GLU289 TRP290 ALA291 LEU292 ASP293 ASN294 PRO295 GLY296 ASN297 ASP298 PHE299 THR300 ARG301 ASN302 GLN303 GLU304 GLY305 THR306 TYR307 THR308 LEU309 LYS310 LEU311 LYS312 ASN313 LYS314 ASN315 THR316 LYS317 TYR318 SER319 ASP320 ILE321 LYS322 ASN323 MET324 TRP325 ILE326 ARG327 ASP328 GLU329 LYS330 LEU331 THR332 VAL333 ALA334 THR335 ASP336 GLY337 TRP338 LYS339 PRO340 SER341 TYR342 VAL343 LYS344 VAL345 ILE346 ALA347 GLY348 ASP349 LYS350 VAL351 ARG352 LEU353 GLU354 LYS355 ASN356 ILE357 ASN358 GLU359 TRP360 ILE361 SER362 GLY363 GLY364 THR365 THR366 TYR367 THR368 LEU369 LYS370
Unit 3 TRP1 ASP2 GLY3 LYS4 GLU5 ASP6 GLY7 THR8 GLY9 THR10 HIS11 SER12 VAL13 ILE14 VAL15 THR16 GLN17 ALA18 ILE19 GLU20 MET21 LEU22 LYS23 HIS24 ASP25 LEU26 SER27 LYS28 ASP29 GLU30 PRO31 GLU32 ALA33 ILE34 ARG35 ASN36 ASP37 LEU38 SER39 ILE40 LEU41 GLU42 LYS43 ASN44 LEU45 HIS46 LYS47 PHE48 GLN49 LEU50 GLY51 SER52 THR53 PHE54 PRO55 ASP56 TYR57 ASP58 PRO59 ASN60 ALA61 TYR62 SER63 LEU64 TYR65 GLN66 ASP67 HIS68 PHE69 TRP70 ASP71 PRO72 ASP73 THR74 ASP75 HIS76 ASN77 PHE78 THR79 GLN80 ASP81 ASN82 LYS83 TRP84 TYR85 LEU86 SER87 TYR88 ALA89 VAL90 PRO91 ASP92 ASN93 ALA94 GLU95 SER96 GLN97 THR98 ARG99 LYS100 PHE101 ALA102 THR103 LEU104 ALA105 LYS106 ASN107 GLU108 TRP109 ASP110 LYS111 GLY112 ASN113 TYR114 GLU115 LYS116 ALA117 ALA118 TRP119 TYR120 LEU121 GLY122 GLN123 GLY124 MET125 HIS126 TYR127 PHE128 GLY129 ASP130 LEU131 ASN132 THR133 PRO134 TYR135 HIS136 ALA137 ALA138 ASN139 VAL140 THR141 ALA142 VAL143 ASP144 SER145 PRO146 GLY147 HIS148 VAL149 LYS150 PHE151 GLU152 THR153 TYR154 ALA155 GLU156 GLU157 ARG158 LYS159 ASP160 THR161 TYR162 ARG163 LEU164 ASP165 THR166 THR167 GLY168 TYR169 ASN170 THR171 ASP172 ASP173 ALA174 PHE175 TYR176 LYS177 ASP178 THR179 LEU180 LYS181 ASN182 ASP183 ASN184 PHE185 ASN186 GLU187 TRP188 SER189 LYS190 GLY191 TYR192 CYS193 LYS194 TYR195 TRP196 ALA197 LYS198 LYS199 ALA200 LYS201 ASN202 LEU203 TYR204 TYR205 SER206 HIS207 ALA208 THR209 MET210 SER211 ASN212 SER213 TRP214 ASP215 ASP216 TRP217 GLU218 TYR219 ALA220 ALA221 SER222 HIS223 GLY224 VAL225 GLY226 ASN227 ALA228 GLN229 LYS230 GLY231 VAL232 ALA233 GLY234 TYR235 LEU236 TYR237 ARG238 PHE239 LEU240 ASN241 ASP242 VAL243 SER244 ASN245 LYS246 ASP247 ALA248 VAL249 ASP250 LYS251 ASP252 TYR253 ASP254 LEU255 ASN256 GLU257 ILE258 VAL259 VAL260 MET261 ILE262 LYS263 THR264 ALA265 ASP266 VAL267 GLN268 ASP269 ALA270 GLY271 THR272 ASP273 ASN274 TYR275 ILE276 TYR277 PHE278 GLY279 ILE280 GLU281 THR282 LYS283 ASP284 GLY285 VAL286 LYS287 GLU288 GLU289 TRP290 ALA291 LEU292 ASP293 ASN294 PRO295 GLY296 ASN297 ASP298 PHE299 THR300 ARG301 ASN302 GLN303 GLU304 GLY305 THR306 TYR307 THR308 LEU309 LYS310 LEU311 LYS312 ASN313 LYS314 ASN315 THR316 LYS317 TYR318 SER319 ASP320 ILE321 LYS322 ASN323 MET324 TRP325 ILE326 ARG327 ASP328 GLU329 LYS330 LEU331 THR332 VAL333 ALA334 THR335 ASP336 GLY337 TRP338 LYS339 PRO340 SER341 TYR342 VAL343 LYS344 VAL345 ILE346 ALA347 GLY348 ASP349 LYS350 VAL351 ARG352 LEU353 GLU354 LYS355 ASN356 ILE357 ASN358 GLU359 TRP360 ILE361 SER362 GLY363 GLY364 THR365 THR366 TYR367 THR368 LEU369 LYS370
Unit 4 TRP1 ASP2 GLY3 LYS4 GLU5 ASP6 GLY7 THR8 GLY9 THR10 HIS11 SER12 VAL13 ILE14 VAL15 THR16 GLN17 ALA18 ILE19 GLU20 MET21 LEU22 LYS23 HIS24 ASP25 LEU26 SER27 LYS28 ASP29 GLU30 PRO31 GLU32 ALA33 ILE34 ARG35 ASN36 ASP37 LEU38 SER39 ILE40 LEU41 GLU42 LYS43 ASN44 LEU45 HIS46 LYS47 PHE48 GLN49 LEU50 GLY51 SER52 THR53 PHE54 PRO55 ASP56 TYR57 ASP58 PRO59 ASN60 ALA61 TYR62 SER63 LEU64 TYR65 GLN66 ASP67 HIS68 PHE69 TRP70 ASP71 PRO72 ASP73 THR74 ASP75 HIS76 ASN77 PHE78 THR79 GLN80 ASP81 ASN82 LYS83 TRP84 TYR85 LEU86 SER87 TYR88 ALA89 VAL90 PRO91 ASP92 ASN93 ALA94 GLU95 SER96 GLN97 THR98 ARG99 LYS100 PHE101 ALA102 THR103 LEU104 ALA105 LYS106 ASN107 GLU108 TRP109 ASP110 LYS111 GLY112 ASN113 TYR114 GLU115 LYS116 ALA117 ALA118 TRP119 TYR120 LEU121 GLY122 GLN123 GLY124 MET125 HIS126 TYR127 PHE128 GLY129 ASP130 LEU131 ASN132 THR133 PRO134 TYR135 HIS136 ALA137 ALA138 ASN139 VAL140 THR141 ALA142 VAL143 ASP144 SER145 PRO146 GLY147 HIS148 VAL149 LYS150 PHE151 GLU152 THR153 TYR154 ALA155 GLU156 GLU157 ARG158 LYS159 ASP160 THR161 TYR162 ARG163 LEU164 ASP165 THR166 THR167 GLY168 TYR169 ASN170 THR171 ASP172 ASP173 ALA174 PHE175 TYR176 LYS177 ASP178 THR179 LEU180 LYS181 ASN182 ASP183 ASN184 PHE185 ASN186 GLU187 TRP188 SER189 LYS190 GLY191 TYR192 CYS193 LYS194 TYR195 TRP196 ALA197 LYS198 LYS199 ALA200 LYS201 ASN202 LEU203 TYR204 TYR205 SER206 HIS207 ALA208 THR209 MET210 SER211 ASN212 SER213 TRP214 ASP215 ASP216 TRP217 GLU218 TYR219 ALA220 ALA221 SER222 HIS223 GLY224 VAL225 GLY226 ASN227 ALA228 GLN229 LYS230 GLY231 VAL232 ALA233 GLY234 TYR235 LEU236 TYR237 ARG238 PHE239 LEU240 ASN241 ASP242 VAL243 SER244 ASN245 LYS246 ASP247 LYS251 ASP252 TYR253 ASP254 LEU255 ASN256 GLU257 ILE258 VAL259 VAL260 MET261 ILE262 LYS263 THR264 ALA265 ASP266 VAL267 GLN268 ASP269 ALA270 GLY271 THR272 ASP273 ASN274 TYR275 ILE276 TYR277 PHE278 GLY279 ILE280 GLU281 THR282 LYS283 ASP284 GLY285 VAL286 LYS287 GLU288 GLU289 TRP290 ALA291 LEU292 ASP293 ASN294 PRO295 GLY296 ASN297 ASP298 PHE299 THR300 ARG301 ASN302 GLN303 GLU304 GLY305 THR306 TYR307 THR308 LEU309 LYS310 LEU311 LYS312 ASN313 LYS314 ASN315 THR316 LYS317 TYR318 SER319 ASP320 ILE321 LYS322 ASN323 MET324 TRP325 ILE326 ARG327 ASP328 GLU329 LYS330 LEU331 THR332 THR335 ASP336 GLY337 TRP338 LYS339 PRO340 SER341 TYR342 VAL343 LYS344 VAL345 ILE346 ALA347 GLY348 ASP349 LYS350 VAL351 ARG352 LEU353 GLU354 LYS355 ASN356 ILE357 ASN358 GLU359 TRP360 ILE361 SER362 GLY363 GLY364 THR365 THR366 TYR367 THR368 LEU369 LYS370

Ligands
Unit 5 CA1371 CA1372 ZN1373 ZN1374 ZN1375
Unit 6 CA1371 CA1372 ZN1373 ZN1374 ZN1375
Unit 7 CA1371 CA1372 ZN1373 ZN1374 ZN1375
Unit 8 CA1371 CA1372 ZN1373 ZN1374 ZN1375

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany