1OKJ - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE ESSENTIAL E. COLI YEAZ PROTEIN BY MAD METHOD USING THE GADOLINIUM COMPLEX "DOTMA"
• Keywords: POTENTIAL ZINC PROTEASE, HYPOTHETICAL PROTEASE YEAZ, METALLOPROTEASE, HYDROLASE, BACTERIAL TARGETS AT IGS-CNRS, BIGS, STRUCTURAL GENOMICS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1OKJ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	220	1663	0
2	Protein		B	223	1686	0
3	Protein		C	219	1655	0
4	Protein		D	221	1668	0
5	Ligand		A	8	0	8
6	Water			303	0	303
total				1194	6672	311

Proteins

Unit 1	GLY -1 LEU 0 ARG 1 ILE 2 LEU 3 ALA 4 ILE 5 ASP 6 THR 7 ALA 8 THR 9 GLU 10 ALA 11 CYS 12 SER 13 VAL 14 ALA 15 LEU 16 TRP 17 ASN 18 ASP 19 GLY 20 THR 21 VAL 22 ASN 23 ALA 24 HIS 25 PHE 26 GLU 27 LEU 28 CYS 29 PRO 30 ARG 31 GLU 32 HIS 33 THR 34 GLN 35 ARG 36 ILE 37 LEU 38 PRO 39 MET 40 VAL 41 GLN 42 ASP 43 ILE 44 LEU 45 THR 46 THR 47 SER 48 GLY 49 THR 50 SER 51 LEU 52 THR 53 ASP 54 ILE 55 ASN 56 ALA 57 LEU 58 ALA 59 TYR 60 GLY 61 ARG 62 GLY 63 PRO 64 GLY 65 SER 66 PHE 67 THR 68 GLY 69 VAL 70 ARG 71 ILE 72 GLY 73 ILE 74 GLY 75 ILE 76 ALA 77 GLN 78 GLY 79 LEU 80 ALA 81 LEU 82 GLY 83 ALA 84 GLU 85 LEU 86 PRO 87 MET 88 ILE 89 GLY 90 VAL 91 SER 92 THR 93 LEU 94 MET 95 THR 96 MET 97 ALA 98 GLN 99 GLY 100 ALA 101 TRP 102 ARG 103 LYS 104 ASN 105 GLY 106 ALA 107 THR 108 ARG 109 VAL 110 LEU 111 ALA 112 ALA 113 ILE 114 ASP 115 ALA 116 ARG 117 MET 118 GLY 119 GLU 120 VAL 121 TYR 122 TRP 123 ALA 124 GLU 125 TYR 126 GLN 127 ARG 128 ASP 129 GLU 130 ASN 131 GLY 132 ILE 133 TRP 134 HIS 135 GLY 136 GLU 137 GLU 138 THR 139 GLU 140 ALA 141 VAL 142 LEU 143 LYS 144 PRO 145 GLU 146 ILE 147 VAL 148 HIS 149 GLU 150 ARG 151 MET 152 GLN 153 GLN 154 LEU 155 SER 156 GLY 157 GLU 158 TRP 159 VAL 160 THR 161 VAL 162 GLY 163 THR 164 GLY 165 TRP 166 GLN 167 ALA 168 TRP 169 PRO 170 ASP 171 LEU 172 GLY 173 LYS 174 GLU 175 SER 176 GLY 177 LEU 178 VAL 179 LEU 180 ARG 181 ASP 182 GLY 183 GLU 184 VAL 185 LEU 186 LEU 187 PRO 188 ALA 189 ALA 190 GLU 191 ASP 192 MET 193 LEU 194 PRO 195 ILE 196 ALA 197 CYS 198 GLN 199 MET 200 PHE 201 ALA 202 GLU 203 GLY 204 LYS 205 THR 206 VAL 207 ALA 208 VAL 209 GLU 210 HIS 211 ALA 212 GLU 213 PRO 214 VAL 215 TYR 216 LEU 217 ARG 218
Unit 2	LYS -4 LYS -3 ALA -2 GLY -1 LEU 0 ARG 1 ILE 2 LEU 3 ALA 4 ILE 5 ASP 6 THR 7 ALA 8 THR 9 GLU 10 ALA 11 CYS 12 SER 13 VAL 14 ALA 15 LEU 16 TRP 17 ASN 18 ASP 19 GLY 20 THR 21 VAL 22 ASN 23 ALA 24 HIS 25 PHE 26 GLU 27 LEU 28 CYS 29 PRO 30 ARG 31 GLU 32 HIS 33 THR 34 GLN 35 ARG 36 ILE 37 LEU 38 PRO 39 MET 40 VAL 41 GLN 42 ASP 43 ILE 44 LEU 45 THR 46 THR 47 SER 48 GLY 49 THR 50 SER 51 LEU 52 THR 53 ASP 54 ILE 55 ASN 56 ALA 57 LEU 58 ALA 59 TYR 60 GLY 61 ARG 62 GLY 63 PRO 64 GLY 65 SER 66 PHE 67 THR 68 GLY 69 VAL 70 ARG 71 ILE 72 GLY 73 ILE 74 GLY 75 ILE 76 ALA 77 GLN 78 GLY 79 LEU 80 ALA 81 LEU 82 GLY 83 ALA 84 GLU 85 LEU 86 PRO 87 MET 88 ILE 89 GLY 90 VAL 91 SER 92 THR 93 LEU 94 MET 95 THR 96 MET 97 ALA 98 GLN 99 GLY 100 ALA 101 TRP 102 ARG 103 LYS 104 ASN 105 GLY 106 ALA 107 THR 108 ARG 109 VAL 110 LEU 111 ALA 112 ALA 113 ILE 114 ASP 115 ALA 116 ARG 117 MET 118 GLY 119 GLU 120 VAL 121 TYR 122 TRP 123 ALA 124 GLU 125 TYR 126 GLN 127 ARG 128 ASP 129 GLU 130 ASN 131 GLY 132 ILE 133 TRP 134 HIS 135 GLY 136 GLU 137 GLU 138 THR 139 GLU 140 ALA 141 VAL 142 LEU 143 LYS 144 PRO 145 GLU 146 ILE 147 VAL 148 HIS 149 GLU 150 ARG 151 MET 152 GLN 153 GLN 154 LEU 155 SER 156 GLY 157 GLU 158 TRP 159 VAL 160 THR 161 VAL 162 GLY 163 THR 164 GLY 165 TRP 166 GLN 167 ALA 168 TRP 169 PRO 170 ASP 171 LEU 172 GLY 173 LYS 174 GLU 175 SER 176 GLY 177 LEU 178 VAL 179 LEU 180 ARG 181 ASP 182 GLY 183 GLU 184 VAL 185 LEU 186 LEU 187 PRO 188 ALA 189 ALA 190 GLU 191 ASP 192 MET 193 LEU 194 PRO 195 ILE 196 ALA 197 CYS 198 GLN 199 MET 200 PHE 201 ALA 202 GLU 203 GLY 204 LYS 205 THR 206 VAL 207 ALA 208 VAL 209 GLU 210 HIS 211 ALA 212 GLU 213 PRO 214 VAL 215 TYR 216 LEU 217 ARG 218
Unit 3	GLY -1 LEU 0 ARG 1 ILE 2 LEU 3 ALA 4 ILE 5 ASP 6 THR 7 ALA 8 THR 9 GLU 10 ALA 11 CYS 12 SER 13 VAL 14 ALA 15 LEU 16 TRP 17 ASN 18 ASP 19 GLY 20 THR 21 VAL 22 ASN 23 ALA 24 HIS 25 PHE 26 GLU 27 LEU 28 CYS 29 PRO 30 ARG 31 GLU 32 HIS 33 THR 34 GLN 35 ARG 36 ILE 37 LEU 38 PRO 39 MET 40 VAL 41 GLN 42 ASP 43 ILE 44 LEU 45 THR 46 THR 47 SER 48 GLY 49 THR 50 SER 51 LEU 52 THR 53 ASP 54 ILE 55 ASN 56 ALA 57 LEU 58 ALA 59 TYR 60 GLY 61 ARG 62 GLY 63 PRO 64 GLY 65 SER 66 PHE 67 THR 68 GLY 69 VAL 70 ARG 71 ILE 72 GLY 73 ILE 74 GLY 75 ILE 76 ALA 77 GLN 78 GLY 79 LEU 80 ALA 81 LEU 82 GLY 83 ALA 84 GLU 85 LEU 86 PRO 87 MET 88 ILE 89 GLY 90 VAL 91 SER 92 THR 93 LEU 94 MET 95 THR 96 MET 97 ALA 98 GLN 99 GLY 100 ALA 101 TRP 102 ARG 103 LYS 104 ASN 105 GLY 106 ALA 107 THR 108 ARG 109 VAL 110 LEU 111 ALA 112 ALA 113 ILE 114 ASP 115 ALA 116 ARG 117 MET 118 GLY 119 GLU 120 VAL 121 TYR 122 TRP 123 ALA 124 GLU 125 TYR 126 GLN 127 ARG 128 ASP 129 GLU 130 ASN 131 GLY 132 ILE 133 TRP 134 HIS 135 GLY 136 GLU 137 GLU 138 THR 139 GLU 140 ALA 141 VAL 142 LEU 143 LYS 144 PRO 145 GLU 146 ILE 147 VAL 148 HIS 149 GLU 150 ARG 151 MET 152 GLN 153 GLN 154 LEU 155 SER 156 GLY 157 GLU 158 TRP 159 VAL 160 THR 161 VAL 162 GLY 163 THR 164 GLY 165 TRP 166 GLN 167 ALA 168 TRP 169 PRO 170 ASP 171 LEU 172 GLY 173 LYS 174 GLU 175 SER 176 GLY 177 LEU 178 VAL 179 LEU 180 ARG 181 ASP 182 GLY 183 GLU 184 VAL 185 LEU 186 LEU 187 PRO 188 ALA 189 ALA 190 GLU 191 ASP 192 MET 193 LEU 194 PRO 195 ILE 196 ALA 197 CYS 198 GLN 199 MET 200 PHE 201 ALA 202 GLU 203 GLY 204 LYS 205 THR 206 VAL 207 ALA 208 VAL 209 GLU 210 HIS 211 ALA 212 GLU 213 PRO 214 VAL 215 TYR 216 LEU 217
Unit 4	ALA -2 GLY -1 LEU 0 ARG 1 ILE 2 LEU 3 ALA 4 ILE 5 ASP 6 THR 7 ALA 8 THR 9 GLU 10 ALA 11 CYS 12 SER 13 VAL 14 ALA 15 LEU 16 TRP 17 ASN 18 ASP 19 GLY 20 THR 21 VAL 22 ASN 23 ALA 24 HIS 25 PHE 26 GLU 27 LEU 28 CYS 29 PRO 30 ARG 31 GLU 32 HIS 33 THR 34 GLN 35 ARG 36 ILE 37 LEU 38 PRO 39 MET 40 VAL 41 GLN 42 ASP 43 ILE 44 LEU 45 THR 46 THR 47 SER 48 GLY 49 THR 50 SER 51 LEU 52 THR 53 ASP 54 ILE 55 ASN 56 ALA 57 LEU 58 ALA 59 TYR 60 GLY 61 ARG 62 GLY 63 PRO 64 GLY 65 SER 66 PHE 67 THR 68 GLY 69 VAL 70 ARG 71 ILE 72 GLY 73 ILE 74 GLY 75 ILE 76 ALA 77 GLN 78 GLY 79 LEU 80 ALA 81 LEU 82 GLY 83 ALA 84 GLU 85 LEU 86 PRO 87 MET 88 ILE 89 GLY 90 VAL 91 SER 92 THR 93 LEU 94 MET 95 THR 96 MET 97 ALA 98 GLN 99 GLY 100 ALA 101 TRP 102 ARG 103 LYS 104 ASN 105 GLY 106 ALA 107 THR 108 ARG 109 VAL 110 LEU 111 ALA 112 ALA 113 ILE 114 ASP 115 ALA 116 ARG 117 MET 118 GLY 119 GLU 120 VAL 121 TYR 122 TRP 123 ALA 124 GLU 125 TYR 126 GLN 127 ARG 128 ASP 129 GLU 130 ASN 131 GLY 132 ILE 133 TRP 134 HIS 135 GLY 136 GLU 137 GLU 138 THR 139 GLU 140 ALA 141 VAL 142 LEU 143 LYS 144 PRO 145 GLU 146 ILE 147 VAL 148 HIS 149 GLU 150 ARG 151 MET 152 GLN 153 GLN 154 LEU 155 SER 156 GLY 157 GLU 158 TRP 159 VAL 160 THR 161 VAL 162 GLY 163 THR 164 GLY 165 TRP 166 GLN 167 ALA 168 TRP 169 PRO 170 ASP 171 LEU 172 GLY 173 LYS 174 GLU 175 SER 176 GLY 177 LEU 178 VAL 179 LEU 180 ARG 181 ASP 182 GLY 183 GLU 184 VAL 185 LEU 186 LEU 187 PRO 188 ALA 189 ALA 190 GLU 191 ASP 192 MET 193 LEU 194 PRO 195 ILE 196 ALA 197 CYS 198 GLN 199 MET 200 PHE 201 ALA 202 GLU 203 GLY 204 LYS 205 THR 206 VAL 207 ALA 208 VAL 209 GLU 210 HIS 211 ALA 212 GLU 213 PRO 214 VAL 215 TYR 216 LEU 217 ARG 218

Ligands

Unit 5

GD3 1213 GD3 1214 GD3 1215 GD3 1216 GD3 1217 GD3 1218 GD3 1219 GD3 1220