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Sequence, Chains, Asymmetric and Biological Units

Title A NOVEL CATALYTIC MOTIF REVEALED BY THE MODEL STRUCTURE OF AMIDE HYDROLYZING ANTIBODY 312D6
Keywords CATALYTIC ANTIBODY, AMIDE HYDROLYSIS
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1OK5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CATALYTIC ANTIBODY 312D6  H 119 1817 0
2  Protein   CATALYTIC ANTIBODY 312D6  L 112 1685 0
3  Ligand   CATALYTIC ANTIBODY 312D6  L 1 0 32
total       232 3502 32

Proteins
Unit 1 GLN1 VAL2 LYS3 LEU4 GLN5 GLU6 SER7 GLY8 PRO9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 ILE20 SER21 CYS22 LYS23 SER24 SER25 GLY26 TYR27 ALA28 PHE29 SER30 THR31 SER32 TRP33 MET34 SER35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 TYR52 PRO53 GLY54 ASP55 GLY56 ASP57 THR58 ASN59 TYR60 ASN61 GLY62 LYS63 PHE64 ARG65 ASP66 LYS67 ALA68 THR69 LEU70 THR71 ALA72 ASP73 LYS74 SER75 SER76 SER77 THR78 ALA79 TYR80 MET81 GLN82 LEU83 SER84 SER85 LEU86 THR87 SER88 VAL89 ASP90 SER91 ALA92 VAL93 TYR94 PHE95 CYS96 ALA97 ARG98 SER99 LEU100 LEU101 ARG102 PRO103 GLU104 ASN105 TYR106 PHE107 ASP108 TYR109 TRP110 GLY111 GLN112 GLY113 THR114 THR115 VAL116 THR117 VAL118 SER119
Unit 2 ASP1 ILE2 GLN3 LEU4 THR5 GLN6 SER7 PRO8 VAL9 SER10 LEU11 ALA12 VAL13 SER14 LEU15 GLY16 GLN17 ARG18 ALA19 THR20 ILE21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 THR28 ILE29 ASP30 ASN31 TYR32 GLY33 ILE34 SER35 PHE36 MET37 ASN38 TRP39 PHE40 GLN41 GLN42 LYS43 PRO44 GLY45 GLN46 PRO47 PRO48 LYS49 LEU50 LEU51 ILE52 TYR53 ALA54 ALA55 PRO56 ASN57 GLN58 GLY59 SER60 GLY61 VAL62 PRO63 ALA64 ARG65 PHE66 SER67 GLY68 SER69 GLY70 SER71 GLY72 THR73 ASP74 PHE75 SER76 LEU77 ASN78 ILE79 HIS80 PRO81 MET82 GLU83 GLU84 ASP85 ASP86 THR87 ALA88 MET89 TYR90 PHE91 CYS92 GLN93 GLN94 SER95 LYS96 GLU97 ASP98 PRO99 TRP100 THR101 PHE102 GLY103 GLY104 GLY105 THR106 LYS107 LEU108 GLU109 ILE110 LYS111 ARG112

Ligands
Unit 3 JCB1113

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany