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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A SIGMA54-ACTIVATOR SUGGESTS THE MECHAN THE CONFORMATIONAL SWITCH NECESSARY FOR SIGMA54 BINDING
Keywords RESPONSE REGULATOR, TWO COMPONENT SYSTEM, AAA DOMAIN, NTRC F DNA-BINDING, TRANSCRIPTION REGULATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1OJL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  A 292 2234 0
2  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  B 251 1929 0
3  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  C 252 1925 0
4  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  D 297 2270 0
5  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  E 285 2183 0
6  Protein   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  F 247 1895 0
7  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  A 1 0 5
8  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  B 1 0 5
9  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  C 1 0 5
10  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  D 1 0 5
11  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  E 1 0 31
12  Ligand   TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR  F 1 0 5
13 Water     102 0 102
total       1732 12436 158
Proteins
Unit 1 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 ALA387 TYR395 SER396 GLY397 GLU398 ILE399 GLN400 PRO401 LEU402 VAL403 ASP404 VAL405 GLU406 LYS407 GLU408 VAL409 ILE410 LEU411 ALA412 ALA413 LEU414 GLU415 LYS416 THR417 GLY418 GLY419 ASN420 LYS421 THR422 GLU423 ALA424 ALA425 ARG426 GLN427 LEU428 GLY429 ILE430 THR431 ARG432 LYS433 THR434 LEU435 LEU436 ALA437 LYS438 LEU439 SER440 ARG441
Unit 2 SER139 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 GLY220 ALA221 ASP222 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 ALA387 ALA388 THR389
Unit 3 SER139 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 GLY220 ALA221 ASP222 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 ALA387 ALA388 THR389 PRO390
Unit 4 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 GLY220 ALA221 ASP222 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 ALA387 ALA388 THR389 PRO390 ILE391 LYS392 GLU398 ILE399 GLN400 PRO401 LEU402 VAL403 ASP404 VAL405 GLU406 LYS407 GLU408 VAL409 ILE410 LEU411 ALA412 ALA413 LEU414 GLU415 LYS416 THR417 GLY418 GLY419 ASN420 LYS421 THR422 GLU423 ALA424 ALA425 ARG426 GLN427 LEU428 GLY429 ILE430 THR431 ARG432 LYS433 THR434 LEU435 LEU436 ALA437 LYS438 LEU439 SER440 ARG441
Unit 5 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 PRO401 LEU402 VAL403 ASP404 VAL405 GLU406 LYS407 GLU408 VAL409 ILE410 LEU411 ALA412 ALA413 LEU414 GLU415 LYS416 THR417 GLY418 GLY419 ASN420 LYS421 THR422 GLU423 ALA424 ALA425 ARG426 GLN427 LEU428 GLY429 ILE430 THR431 ARG432 LYS433 THR434 LEU435 LEU436 ALA437 LYS438 LEU439 SER440 ARG441
Unit 6 HIS140 MET141 ILE142 GLY143 SER144 SER145 PRO146 ALA147 MET148 GLN149 HIS150 LEU151 LEU152 ASN153 GLU154 ILE155 ALA156 MET157 VAL158 ALA159 PRO160 SER161 ASP162 ALA163 THR164 VAL165 LEU166 ILE167 HIS168 GLY169 ASP170 SER171 GLY172 THR173 GLY174 LYS175 GLU176 LEU177 VAL178 ALA179 ARG180 ALA181 LEU182 HIS183 ALA184 CYS185 SER186 ALA187 ARG188 SER189 ASP190 ARG191 PRO192 LEU193 VAL194 THR195 LEU196 ASN197 CYS198 ALA199 ALA200 LEU201 ASN202 GLU203 SER204 LEU205 LEU206 GLU207 SER208 GLU209 LEU210 PHE211 GLY212 HIS213 GLU214 LYS215 GLY216 ALA217 PHE218 THR219 LYS223 ARG224 ARG225 GLU226 GLY227 ARG228 PHE229 VAL230 GLU231 ALA232 ASP233 GLY234 GLY235 THR236 LEU237 PHE238 LEU239 ASP240 GLU241 ILE242 GLY243 ASP244 ILE245 SER246 PRO247 LEU248 MET249 GLN250 VAL251 ARG252 LEU253 LEU254 ARG255 ALA256 ILE257 GLN258 GLU259 ARG260 GLU261 VAL262 GLN263 ARG264 VAL265 GLY266 SER267 ASN268 GLN269 THR270 ILE271 SER272 VAL273 ASP274 VAL275 ARG276 LEU277 ILE278 ALA279 ALA280 THR281 HIS282 ARG283 ASP284 LEU285 ALA286 GLU287 GLU288 VAL289 SER290 ALA291 GLY292 ARG293 PHE294 ARG295 GLN296 ASP297 LEU298 TYR299 TYR300 ARG301 LEU302 ASN303 VAL304 VAL305 ALA306 ILE307 GLU308 MET309 PRO310 SER311 LEU312 ARG313 GLN314 ARG315 ARG316 GLU317 ASP318 ILE319 PRO320 LEU321 LEU322 ALA323 ASP324 HIS325 PHE326 LEU327 ARG328 ARG329 PHE330 ALA331 GLU332 ARG333 ASN334 ARG335 LYS336 VAL337 VAL338 LYS339 GLY340 PHE341 THR342 PRO343 GLN344 ALA345 MET346 ASP347 LEU348 LEU349 ILE350 HIS351 TYR352 ASP353 TRP354 PRO355 GLY356 ASN357 ILE358 ARG359 GLU360 LEU361 GLU362 ASN363 ALA364 ILE365 GLU366 ARG367 ALA368 VAL369 VAL370 LEU371 LEU372 THR373 GLY374 GLU375 TYR376 ILE377 SER378 GLU379 ARG380 GLU381 LEU382 PRO383 LEU384 ALA385 ILE386 ALA387 ALA388 THR389
Ligands
Unit 7 PO41442
Unit 8 PO41390
Unit 9 PO41391
Unit 10 PO41442
Unit 11 ATP1442
Unit 12 PO41390
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany