1OJF - Sequence, Chains, Asymmetric and Biological Units

• Title: PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5
• Keywords: SINGLE DOMAIN ANTIBODY, OLIGOMERIZATION, VEROTOXIN
• Experiment: theoretical model
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1OJF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5	A	190	1418	0
2	Protein	PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5	B	190	1418	0
3	Protein	PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5	C	190	1418	0
4	Protein	PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5	D	190	1418	0
5	Protein	PENTAMERIC SINGLE DOMAIN ANTIBODY 1V5	E	190	1418	0
total				950	7090	0

Proteins

Unit 1	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69 GLY 70 GLY 71 GLY 72 GLY 73 SER 74 ASP 75 VAL 76 GLN 77 LEU 78 GLN 79 ALA 80 SER 81 GLY 82 GLY 83 GLY 84 SER 85 VAL 86 GLN 87 ALA 88 GLY 89 ASP 90 SER 91 LEU 92 ARG 93 LEU 94 SER 95 CYS 96 ALA 97 ALA 98 SER 99 GLY 100 ARG 101 PRO 102 PHE 103 SER 104 SER 105 PHE 106 ALA 107 MET 108 GLY 109 TRP 110 PHE 111 ARG 112 GLN 113 ALA 114 PRO 115 GLY 116 LYS 117 GLU 118 ARG 119 GLU 120 PHE 121 VAL 122 ALA 123 ALA 124 ILE 125 SER 126 ALA 127 SER 128 GLY 129 GLY 130 GLU 131 THR 132 TYR 133 TYR 134 THR 135 GLY 136 SER 137 LEU 138 LYS 139 GLY 140 ARG 141 PHE 142 THR 143 ILE 144 SER 145 ARG 146 ASP 147 ASN 148 ALA 149 LYS 150 ASN 151 THR 152 VAL 153 TYR 154 LEU 155 GLN 156 MET 157 ASP 158 SER 159 LEU 160 LYS 161 PRO 162 GLU 163 ASP 164 THR 165 GLY 166 VAL 167 TYR 168 TYR 169 CYS 170 ALA 171 ALA 172 THR 173 ILE 174 ASN 175 GLY 176 ALA 177 ALA 178 ARG 179 ARG 180 GLY 181 GLN 182 GLY 183 THR 184 GLN 185 VAL 186 THR 187 VAL 188 SER 189 SER 190
Unit 2	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69 GLY 70B GLY 71B GLY 72B GLY 73B SER 74B ASP 75 VAL 76 GLN 77 LEU 78 GLN 79 ALA 80 SER 81 GLY 82 GLY 83 GLY 84 SER 85 VAL 86 GLN 87 ALA 88 GLY 89 ASP 90 SER 91 LEU 92 ARG 93 LEU 94 SER 95 CYS 96 ALA 97 ALA 98 SER 99 GLY 100 ARG 101 PRO 102 PHE 103 SER 104 SER 105 PHE 106 ALA 107 MET 108 GLY 109 TRP 110 PHE 111 ARG 112 GLN 113 ALA 114 PRO 115 GLY 116 LYS 117 GLU 118 ARG 119 GLU 120 PHE 121 VAL 122 ALA 123 ALA 124 ILE 125 SER 126 ALA 127 SER 128 GLY 129 GLY 130 GLU 131 THR 132 TYR 133 TYR 134 THR 135 GLY 136 SER 137 LEU 138 LYS 139 GLY 140 ARG 141 PHE 142 THR 143 ILE 144 SER 145 ARG 146 ASP 147 ASN 148 ALA 149 LYS 150 ASN 151 THR 152 VAL 153 TYR 154 LEU 155 GLN 156 MET 157 ASP 158 SER 159 LEU 160 LYS 161 PRO 162 GLU 163 ASP 164 THR 165 GLY 166 VAL 167 TYR 168 TYR 169 CYS 170 ALA 171 ALA 172 THR 173 ILE 174 ASN 175 GLY 176 ALA 177 ALA 178 ARG 179 ARG 180 GLY 181 GLN 182 GLY 183 THR 184 GLN 185 VAL 186 THR 187 VAL 188 SER 189 SER 190
Unit 3	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69 GLY 70C GLY 71C GLY 72C GLY 73C SER 74C ASP 75 VAL 76 GLN 77 LEU 78 GLN 79 ALA 80 SER 81 GLY 82 GLY 83 GLY 84 SER 85 VAL 86 GLN 87 ALA 88 GLY 89 ASP 90 SER 91 LEU 92 ARG 93 LEU 94 SER 95 CYS 96 ALA 97 ALA 98 SER 99 GLY 100 ARG 101 PRO 102 PHE 103 SER 104 SER 105 PHE 106 ALA 107 MET 108 GLY 109 TRP 110 PHE 111 ARG 112 GLN 113 ALA 114 PRO 115 GLY 116 LYS 117 GLU 118 ARG 119 GLU 120 PHE 121 VAL 122 ALA 123 ALA 124 ILE 125 SER 126 ALA 127 SER 128 GLY 129 GLY 130 GLU 131 THR 132 TYR 133 TYR 134 THR 135 GLY 136 SER 137 LEU 138 LYS 139 GLY 140 ARG 141 PHE 142 THR 143 ILE 144 SER 145 ARG 146 ASP 147 ASN 148 ALA 149 LYS 150 ASN 151 THR 152 VAL 153 TYR 154 LEU 155 GLN 156 MET 157 ASP 158 SER 159 LEU 160 LYS 161 PRO 162 GLU 163 ASP 164 THR 165 GLY 166 VAL 167 TYR 168 TYR 169 CYS 170 ALA 171 ALA 172 THR 173 ILE 174 ASN 175 GLY 176 ALA 177 ALA 178 ARG 179 ARG 180 GLY 181 GLN 182 GLY 183 THR 184 GLN 185 VAL 186 THR 187 VAL 188 SER 189 SER 190
Unit 4	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69 GLY 70D GLY 71D GLY 72D GLY 73D SER 74D ASP 75 VAL 76 GLN 77 LEU 78 GLN 79 ALA 80 SER 81 GLY 82 GLY 83 GLY 84 SER 85 VAL 86 GLN 87 ALA 88 GLY 89 ASP 90 SER 91 LEU 92 ARG 93 LEU 94 SER 95 CYS 96 ALA 97 ALA 98 SER 99 GLY 100 ARG 101 PRO 102 PHE 103 SER 104 SER 105 PHE 106 ALA 107 MET 108 GLY 109 TRP 110 PHE 111 ARG 112 GLN 113 ALA 114 PRO 115 GLY 116 LYS 117 GLU 118 ARG 119 GLU 120 PHE 121 VAL 122 ALA 123 ALA 124 ILE 125 SER 126 ALA 127 SER 128 GLY 129 GLY 130 GLU 131 THR 132 TYR 133 TYR 134 THR 135 GLY 136 SER 137 LEU 138 LYS 139 GLY 140 ARG 141 PHE 142 THR 143 ILE 144 SER 145 ARG 146 ASP 147 ASN 148 ALA 149 LYS 150 ASN 151 THR 152 VAL 153 TYR 154 LEU 155 GLN 156 MET 157 ASP 158 SER 159 LEU 160 LYS 161 PRO 162 GLU 163 ASP 164 THR 165 GLY 166 VAL 167 TYR 168 TYR 169 CYS 170 ALA 171 ALA 172 THR 173 ILE 174 ASN 175 GLY 176 ALA 177 ALA 178 ARG 179 ARG 180 GLY 181 GLN 182 GLY 183 THR 184 GLN 185 VAL 186 THR 187 VAL 188 SER 189 SER 190
Unit 5	THR 1 PRO 2 ASP 3 CYS 4 VAL 5 THR 6 GLY 7 LYS 8 VAL 9 GLU 10 TYR 11 THR 12 LYS 13 TYR 14 ASN 15 ASP 16 ASP 17 ASP 18 THR 19 PHE 20 THR 21 VAL 22 LYS 23 VAL 24 GLY 25 ASP 26 LYS 27 GLU 28 LEU 29 PHE 30 THR 31 ASN 32 ARG 33 TRP 34 ASN 35 LEU 36 GLN 37 SER 38 LEU 39 LEU 40 LEU 41 SER 42 ALA 43 GLN 44 ILE 45 THR 46 GLY 47 MET 48 THR 49 VAL 50 THR 51 ILE 52 LYS 53 THR 54 ASN 55 ALA 56 CYS 57 HIS 58 ASN 59 GLY 60 GLY 61 GLY 62 PHE 63 SER 64 GLU 65 VAL 66 ILE 67 PHE 68 ARG 69 GLY 70E GLY 71E GLY 72E GLY 73E SER 74E ASP 75 VAL 76 GLN 77 LEU 78 GLN 79 ALA 80 SER 81 GLY 82 GLY 83 GLY 84 SER 85 VAL 86 GLN 87 ALA 88 GLY 89 ASP 90 SER 91 LEU 92 ARG 93 LEU 94 SER 95 CYS 96 ALA 97 ALA 98 SER 99 GLY 100 ARG 101 PRO 102 PHE 103 SER 104 SER 105 PHE 106 ALA 107 MET 108 GLY 109 TRP 110 PHE 111 ARG 112 GLN 113 ALA 114 PRO 115 GLY 116 LYS 117 GLU 118 ARG 119 GLU 120 PHE 121 VAL 122 ALA 123 ALA 124 ILE 125 SER 126 ALA 127 SER 128 GLY 129 GLY 130 GLU 131 THR 132 TYR 133 TYR 134 THR 135 GLY 136 SER 137 LEU 138 LYS 139 GLY 140 ARG 141 PHE 142 THR 143 ILE 144 SER 145 ARG 146 ASP 147 ASN 148 ALA 149 LYS 150 ASN 151 THR 152 VAL 153 TYR 154 LEU 155 GLN 156 MET 157 ASP 158 SER 159 LEU 160 LYS 161 PRO 162 GLU 163 ASP 164 THR 165 GLY 166 VAL 167 TYR 168 TYR 169 CYS 170 ALA 171 ALA 172 THR 173 ILE 174 ASN 175 GLY 176 ALA 177 ALA 178 ARG 179 ARG 180 GLY 181 GLN 182 GLY 183 THR 184 GLN 185 VAL 186 THR 187 VAL 188 SER 189 SER 190