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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HLA-B*2705 COMPLEXED WITH THE VASOACTIV INTESTINAL PEPTIDE TYPE 1 RECEPTOR (VIPR) PEPTIDE (RESIDUES
Keywords IMMUNE SYSTEM-COMPLEX, IMMUNE SYSTEM, MHC (MAJOR HISTOCOMPAT COMPLEX), HLA- B*2705
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1OGT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HLA CLASS I HISTOCOMPATIBILITY ANTIGEN  A 276 2252 0
2  Protein   BETA-2-MICROGLOBULIN  B 100 837 0
3  Protein   VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR 1  C 9 100 0
4  Ligand   HLA CLASS I HISTOCOMPATIBILITY ANTIGEN  A 3 0 13
5  Ligand   BETA-2-MICROGLOBULIN  B 1 0 6
6  Ligand   VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR 1  C 2 0 12
7 Water     721 0 721
total       1112 3189 752

Proteins
Unit 1 GLY1 SER2 HIS3 SER4 MET5 ARG6 TYR7 PHE8 HIS9 THR10 SER11 VAL12 SER13 ARG14 PRO15 GLY16 ARG17 GLY18 GLU19 PRO20 ARG21 PHE22 ILE23 THR24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 THR31 LEU32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ALA41 SER42 PRO43 ARG44 GLU45 GLU46 PRO47 ARG48 ALA49 PRO50 TRP51 ILE52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ASP61 ARG62 GLU63 THR64 GLN65 ILE66 CYS67 LYS68 ALA69 LYS70 ALA71 GLN72 THR73 ASP74 ARG75 GLU76 ASP77 LEU78 ARG79 THR80 LEU81 LEU82 ARG83 TYR84 TYR85 ASN86 GLN87 SER88 GLU89 ALA90 GLY91 SER92 HIS93 THR94 LEU95 GLN96 ASN97 MET98 TYR99 GLY100 CYS101 ASP102 VAL103 GLY104 PRO105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 HIS114 GLN115 ASP116 ALA117 TYR118 ASP119 GLY120 LYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 SER131 SER132 TRP133 THR134 ALA135 ALA136 ASP137 THR138 ALA139 ALA140 GLN141 ILE142 THR143 GLN144 ARG145 LYS146 TRP147 GLU148 ALA149 ALA150 ARG151 VAL152 ALA153 GLU154 GLN155 LEU156 ARG157 ALA158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 VAL165 GLU166 TRP167 LEU168 ARG169 ARG170 TYR171 LEU172 GLU173 ASN174 GLY175 LYS176 GLU177 THR178 LEU179 GLN180 ARG181 ALA182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 VAL189 THR190 HIS191 HIS192 PRO193 ILE194 SER195 ASP196 HIS197 GLU198 ALA199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 GLU212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 ARG219 ASP220 GLY221 GLU222 ASP223 GLN224 THR225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 ARG239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 GLU253 GLU254 GLN255 ARG256 TYR257 THR258 CYS259 HIS260 VAL261 GLN262 HIS263 GLU264 GLY265 LEU266 PRO267 LYS268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274 GLU275 PRO276
Unit 2 MET0 ILE1 GLN2 ARG3 THR4 PRO5 LYS6 ILE7 GLN8 VAL9 TYR10 SER11 ARG12 HIS13 PRO14 ALA15 GLU16 ASN17 GLY18 LYS19 SER20 ASN21 PHE22 LEU23 ASN24 CYS25 TYR26 VAL27 SER28 GLY29 PHE30 HIS31 PRO32 SER33 ASP34 ILE35 GLU36 VAL37 ASP38 LEU39 LEU40 LYS41 ASN42 GLY43 GLU44 ARG45 ILE46 GLU47 LYS48 VAL49 GLU50 HIS51 SER52 ASP53 LEU54 SER55 PHE56 SER57 LYS58 ASP59 TRP60 SER61 PHE62 TYR63 LEU64 LEU65 TYR66 TYR67 THR68 GLU69 PHE70 THR71 PRO72 THR73 GLU74 LYS75 ASP76 GLU77 TYR78 ALA79 CYS80 ARG81 VAL82 ASN83 HIS84 VAL85 THR86 LEU87 SER88 GLN89 PRO90 LYS91 ILE92 VAL93 LYS94 TRP95 ASP96 ARG97 ASP98 MET99
Unit 3 ARG1 ARG2 LYS3 TRP4 ARG5 ARG6 TRP7 HIS8 LEU9

Ligands
Unit 4 GOL1277 GOL1278 MN1279
Unit 5 GOL1100
Unit 6 GOL1010 GOL1011

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany