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Sequence, Chains, Asymmetric and Biological Units

Title EXPANSION OF THE GLYCOSYNTHASE REPERTOIRE TO PRODUCE DEFINED OLIGOSACCHARIDES
Keywords HYDROLASE, MANNANASE, FAMILY 26, GLYCOSIDE-HYDROLASE, GLYCOS MANNO-OLIGOSACCHARIDE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1ODZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MANNAN ENDO-1,4-BETA-MANNOSIDASE  A 379 3033 0
2  Protein   MANNAN ENDO-1,4-BETA-MANNOSIDASE  B 379 3032 0
3  Ligand    C 2 0 23
4  Ligand    D 2 0 23
5  Ligand   MANNAN ENDO-1,4-BETA-MANNOSIDASE  A 3 0 10
6  Ligand   MANNAN ENDO-1,4-BETA-MANNOSIDASE  B 3 0 10
7 Water     1033 0 1033
total       1801 6065 1099

Proteins
Unit 1 VAL42 LYS43 PRO44 VAL45 THR46 VAL47 LYS48 LEU49 VAL50 ASP51 SER52 GLN53 ALA54 THR55 MET56 GLU57 THR58 ARG59 SER60 LEU61 PHE62 ALA63 PHE64 MET65 GLN66 GLU67 GLN68 ARG69 ARG70 HIS71 SER72 ILE73 MET74 PHE75 GLY76 HIS77 GLN78 HIS79 GLU80 THR81 THR82 GLN83 GLY84 LEU85 THR86 ILE87 THR88 ARG89 THR90 ASP91 GLY92 THR93 GLN94 SER95 ASP96 THR97 PHE98 ASN99 ALA100 VAL101 GLY102 ASP103 PHE104 ALA105 ALA106 VAL107 TYR108 GLY109 TRP110 ASP111 THR112 LEU113 SER114 ILE115 VAL116 ALA117 PRO118 LYS119 ALA120 GLU121 GLY122 ASP123 ILE124 VAL125 ALA126 GLN127 VAL128 LYS129 LYS130 ALA131 TYR132 ALA133 ARG134 GLY135 GLY136 ILE137 ILE138 THR139 VAL140 SER141 SER142 HIS143 PHE144 ASP145 ASN146 PRO147 LYS148 THR149 ASP150 THR151 GLN152 LYS153 GLY154 VAL155 TRP156 PRO157 VAL158 GLY159 THR160 SER161 TRP162 ASP163 GLN164 THR165 PRO166 ALA167 VAL168 VAL169 ASP170 SER171 LEU172 PRO173 GLY174 GLY175 ALA176 TYR177 ASN178 PRO179 VAL180 LEU181 ASN182 GLY183 TYR184 LEU185 ASP186 GLN187 VAL188 ALA189 GLU190 TRP191 ALA192 ASN193 ASN194 LEU195 LYS196 ASP197 GLU198 GLN199 GLY200 ARG201 LEU202 ILE203 PRO204 VAL205 ILE206 PHE207 ARG208 LEU209 TYR210 HIS211 GLU212 ASN213 THR214 GLY215 SER216 TRP217 PHE218 TRP219 TRP220 GLY221 ASP222 LYS223 GLN224 SER225 THR226 PRO227 GLU228 GLN229 TYR230 LYS231 GLN232 LEU233 PHE234 ARG235 TYR236 SER237 VAL238 GLU239 TYR240 LEU241 ARG242 ASP243 VAL244 LYS245 GLY246 VAL247 ARG248 ASN249 PHE250 LEU251 TYR252 ALA253 TYR254 SER255 PRO256 ASN257 ASN258 PHE259 TRP260 ASP261 VAL262 THR263 GLU264 ALA265 ASN266 TYR267 LEU268 GLU269 ARG270 TYR271 PRO272 GLY273 ASP274 GLU275 TRP276 VAL277 ASP278 VAL279 LEU280 GLY281 PHE282 ASP283 THR284 TYR285 GLY286 PRO287 VAL288 ALA289 ASP290 ASN291 ALA292 ASP293 TRP294 PHE295 ARG296 ASN297 VAL298 VAL299 ALA300 ASN301 ALA302 ALA303 LEU304 VAL305 ALA306 ARG307 MET308 ALA309 GLU310 ALA311 ARG312 GLY313 LYS314 ILE315 PRO316 VAL317 ILE318 SER319 GLY320 ILE321 GLY322 ILE323 ARG324 ALA325 PRO326 ASP327 ILE328 GLU329 ALA330 GLY331 LEU332 TYR333 ASP334 ASN335 GLN336 TRP337 TYR338 ARG339 LYS340 LEU341 ILE342 SER343 GLY344 LEU345 LYS346 ALA347 ASP348 PRO349 ASP350 ALA351 ARG352 GLU353 ILE354 ALA355 PHE356 LEU357 LEU358 VAL359 TRP360 ARG361 ASN362 ALA363 PRO364 GLN365 GLY366 VAL367 PRO368 GLY369 GLY372 THR373 GLN374 VAL375 PRO376 HIS377 TYR378 TRP379 VAL380 PRO381 ALA382 ASN383 ARG384 PRO385 GLU386 ASN387 ILE388 ASN389 ASN390 GLY391 THR392 LEU393 GLU394 ASP395 PHE396 GLN397 ALA398 PHE399 TYR400 ALA401 ASP402 GLU403 PHE404 THR405 ALA406 PHE407 ASN408 ARG409 ASP410 ILE411 GLU412 GLN413 VAL414 TYR415 GLN416 ARG417 PRO418 THR419 LEU420 ILE421 VAL422
Unit 2 VAL42 LYS43 PRO44 VAL45 THR46 VAL47 LYS48 LEU49 VAL50 ASP51 SER52 GLN53 ALA54 THR55 MET56 GLU57 THR58 ARG59 SER60 LEU61 PHE62 ALA63 PHE64 MET65 GLN66 GLU67 GLN68 ARG69 ARG70 HIS71 SER72 ILE73 MET74 PHE75 GLY76 HIS77 GLN78 HIS79 GLU80 THR81 THR82 GLN83 GLY84 LEU85 THR86 ILE87 THR88 ARG89 THR90 ASP91 GLY92 THR93 GLN94 SER95 ASP96 THR97 PHE98 ASN99 ALA100 VAL101 GLY102 ASP103 PHE104 ALA105 ALA106 VAL107 TYR108 GLY109 TRP110 ASP111 THR112 LEU113 SER114 ILE115 VAL116 ALA117 PRO118 LYS119 ALA120 GLU121 GLY122 ASP123 ILE124 VAL125 ALA126 GLN127 VAL128 LYS129 LYS130 ALA131 TYR132 ALA133 ARG134 GLY135 GLY136 ILE137 ILE138 THR139 VAL140 SER141 SER142 HIS143 PHE144 ASP145 ASN146 PRO147 LYS148 THR149 ASP150 THR151 GLN152 LYS153 GLY154 VAL155 TRP156 PRO157 VAL158 GLY159 THR160 SER161 TRP162 ASP163 GLN164 THR165 PRO166 ALA167 VAL168 VAL169 ASP170 SER171 LEU172 PRO173 GLY174 GLY175 ALA176 TYR177 ASN178 PRO179 VAL180 LEU181 ASN182 GLY183 TYR184 LEU185 ASP186 GLN187 VAL188 ALA189 GLU190 TRP191 ALA192 ASN193 ASN194 LEU195 LYS196 ASP197 GLU198 GLN199 GLY200 ARG201 LEU202 ILE203 PRO204 VAL205 ILE206 PHE207 ARG208 LEU209 TYR210 HIS211 GLU212 ASN213 THR214 GLY215 SER216 TRP217 PHE218 TRP219 TRP220 GLY221 ASP222 LYS223 GLN224 SER225 THR226 PRO227 GLU228 GLN229 TYR230 LYS231 GLN232 LEU233 PHE234 ARG235 TYR236 SER237 VAL238 GLU239 TYR240 LEU241 ARG242 ASP243 VAL244 LYS245 GLY246 VAL247 ARG248 ASN249 PHE250 LEU251 TYR252 ALA253 TYR254 SER255 PRO256 ASN257 ASN258 PHE259 TRP260 ASP261 VAL262 THR263 GLU264 ALA265 ASN266 TYR267 LEU268 GLU269 ARG270 TYR271 PRO272 GLY273 ASP274 GLU275 TRP276 VAL277 ASP278 VAL279 LEU280 GLY281 PHE282 ASP283 THR284 TYR285 GLY286 PRO287 VAL288 ALA289 ASP290 ASN291 ALA292 ASP293 TRP294 PHE295 ARG296 ASN297 VAL298 VAL299 ALA300 ASN301 ALA302 ALA303 LEU304 VAL305 ALA306 ARG307 MET308 ALA309 GLU310 ALA311 ARG312 GLY313 LYS314 ILE315 PRO316 VAL317 ILE318 SER319 GLY320 ILE321 GLY322 ILE323 ARG324 ALA325 PRO326 ASP327 ILE328 GLU329 ALA330 GLY331 LEU332 TYR333 ASP334 ASN335 GLN336 TRP337 TYR338 ARG339 LYS340 LEU341 ILE342 SER343 GLY344 LEU345 LYS346 ALA347 ASP348 PRO349 ASP350 ALA351 ARG352 GLU353 ILE354 ALA355 PHE356 LEU357 LEU358 VAL359 TRP360 ARG361 ASN362 ALA363 PRO364 GLN365 GLY366 VAL367 PRO368 GLY369 GLY372 THR373 GLN374 VAL375 PRO376 HIS377 TYR378 TRP379 VAL380 PRO381 ALA382 ASN383 ARG384 PRO385 GLU386 ASN387 ILE388 ASN389 ASN390 GLY391 THR392 LEU393 GLU394 ASP395 PHE396 GLN397 ALA398 PHE399 TYR400 ALA401 ASP402 GLU403 PHE404 THR405 ALA406 PHE407 ASN408 ARG409 ASP410 ILE411 GLU412 GLN413 VAL414 TYR415 GLN416 ARG417 PRO418 THR419 LEU420 ILE421 VAL422

Ligands
Unit 3 MAN1 BMA2
Unit 4 MAN1 BMA2
Unit 5 ZN1423 TRS1424 NA1427
Unit 6 ZN1423 TRS1426 NA1427

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany