1OBF - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ALCALIGENES XYLOSOXIDANS AT 1.7 A RESOLUTION.
• Keywords: GLYCOLYTIC PATHWAY, OXIDOREDUCTASE, FREE-NAD GAPDH
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1OBF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	O	335	2507	8
2	Protein	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	P	335	2507	8
3	Ligand	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	O	3	0	11
4	Ligand	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	P	3	0	19
5	Water			501	0	501
total				1177	5014	547

Proteins

Unit 1

THR 1 ILE 2 ARG 3 VAL 4 ALA 5 ILE 6 ASN 7 GLY 8 TYR 9 GLY 10 ARG 11 ILE 12 GLY 13 ARG 14 ASN 15 ILE 16 LEU 17 ARG 18 ALA 19 HIS 20 TYR 21 GLU 22 GLY 23 GLY 24 LYS 25 SER 26 HIS 27 ASP 28 ILE 29 GLU 30 ILE 31 VAL 32 ALA 33 ILE 34 ASN 35 ASP 36 LEU 37 GLY 38 ASP 39 PRO 40 LYS 41 THR 42 ASN 43 ALA 44 HIS 45 LEU 46 THR 47 ARG 48 TYR 49 ASP 50 THR 51 ALA 52 HIS 53 GLY 54 LYS 55 PHE 56 PRO 57 GLY 58 THR 59 VAL 60 SER 61 VAL 62 ASN 63 GLY 64 SER 65 TYR 66 MET 67 VAL 68 VAL 69 ASN 70 GLY 71 ASP 72 LYS 73 ILE 74 ARG 75 VAL 76 ASP 77 ALA 78 ASN 79 ARG 80 ASN 81 PRO 82 ALA 83 GLN 84 LEU 85 PRO 86 TRP 87 GLY 88 ALA 89 LEU 90 LYS 91 VAL 92 ASP 93 VAL 94 VAL 95 LEU 96 GLU 97 CYS 98 THR 99 GLY 100 PHE 101 PHE 102 THR 103 THR 104 LYS 105 GLU 106 LYS 107 ALA 108 GLY 109 ALA 110 HIS 111 ILE 112 LYS 113 GLY 114 GLY 115 ALA 116 LYS 117 LYS 118 VAL 119 ILE 120 ILE 121 SER 122 ALA 123 PRO 124 GLY 125 GLY 126 ALA 127 ASP 128 VAL 129 ASP 130 ALA 131 THR 132 VAL 133 VAL 134 TYR 135 GLY 136 VAL 137 ASN 138 HIS 139 GLY 140 THR 141 LEU 142 LYS 143 SER 144 THR 145 ASP 146 THR 147 VAL 148 ILE 149 SER 150 ASN 151 ALA 152 SER 153 CSD 154 THR 155 THR 156 ASN 157 CYS 158 LEU 159 ALA 160 PRO 161 LEU 162 VAL 163 LYS 164 PRO 165 LEU 166 ASN 167 ASP 168 LYS 169 LEU 170 GLY 171 LEU 172 GLN 173 ASP 174 GLY 175 LEU 176 MET 177 THR 178 THR 179 VAL 180 HIS 181 ALA 182 TYR 183 THR 184 ASN 185 ASN 186 GLN 187 VAL 188 LEU 189 THR 190 ASP 191 VAL 192 TYR 193 HIS 194 GLU 195 ASP 196 LEU 197 ARG 198 ARG 199 ALA 200 ARG 201 SER 202 ALA 203 THR 204 MET 205 SER 206 MET 207 ILE 208 PRO 209 THR 210 LYS 211 THR 212 GLY 213 ALA 214 ALA 215 ALA 216 ALA 217 VAL 218 GLY 219 ASP 220 VAL 221 LEU 222 PRO 223 GLU 224 LEU 225 ASP 226 GLY 227 LYS 228 LEU 229 ASN 230 GLY 231 TYR 232 ALA 233 ILE 234 ARG 235 VAL 236 PRO 237 THR 238 ILE 239 ASN 240 VAL 241 SER 242 ILE 243 VAL 244 ASP 245 LEU 246 SER 247 PHE 248 VAL 249 ALA 250 LYS 251 ARG 252 ASN 253 THR 254 THR 255 VAL 256 GLU 257 GLU 258 VAL 259 ASN 260 GLY 261 ILE 262 LEU 263 LYS 264 ALA 265 ALA 266 SER 267 GLU 268 GLY 269 GLU 270 LEU 271 LYS 272 GLY 273 ILE 274 LEU 275 ASP 276 TYR 277 ASN 278 THR 279 GLU 280 PRO 281 LEU 282 VAL 283 SER 284 VAL 285 ASP 286 TYR 287 ASN 288 HIS 289 ASP 290 PRO 291 ALA 292 SER 293 SER 294 THR 295 VAL 296 ASP 297 ALA 298 SER 299 LEU 300 THR 301 LYS 302 VAL 303 SER 304 GLY 305 ARG 306 LEU 307 VAL 308 LYS 309 VAL 310 SER 311 SER 312 TRP 313 TYR 314 ASP 315 ASN 316 GLU 317 TRP 318 GLY 319 PHE 320 SER 321 ASN 322 ARG 323 MET 324 LEU 325 ASP 326 THR 327 THR 328 VAL 329 ALA 330 LEU 331 MET 332 SER 333 ALA 334 ALA 335

Unit 2

THR 1 ILE 2 ARG 3 VAL 4 ALA 5 ILE 6 ASN 7 GLY 8 TYR 9 GLY 10 ARG 11 ILE 12 GLY 13 ARG 14 ASN 15 ILE 16 LEU 17 ARG 18 ALA 19 HIS 20 TYR 21 GLU 22 GLY 23 GLY 24 LYS 25 SER 26 HIS 27 ASP 28 ILE 29 GLU 30 ILE 31 VAL 32 ALA 33 ILE 34 ASN 35 ASP 36 LEU 37 GLY 38 ASP 39 PRO 40 LYS 41 THR 42 ASN 43 ALA 44 HIS 45 LEU 46 THR 47 ARG 48 TYR 49 ASP 50 THR 51 ALA 52 HIS 53 GLY 54 LYS 55 PHE 56 PRO 57 GLY 58 THR 59 VAL 60 SER 61 VAL 62 ASN 63 GLY 64 SER 65 TYR 66 MET 67 VAL 68 VAL 69 ASN 70 GLY 71 ASP 72 LYS 73 ILE 74 ARG 75 VAL 76 ASP 77 ALA 78 ASN 79 ARG 80 ASN 81 PRO 82 ALA 83 GLN 84 LEU 85 PRO 86 TRP 87 GLY 88 ALA 89 LEU 90 LYS 91 VAL 92 ASP 93 VAL 94 VAL 95 LEU 96 GLU 97 CYS 98 THR 99 GLY 100 PHE 101 PHE 102 THR 103 THR 104 LYS 105 GLU 106 LYS 107 ALA 108 GLY 109 ALA 110 HIS 111 ILE 112 LYS 113 GLY 114 GLY 115 ALA 116 LYS 117 LYS 118 VAL 119 ILE 120 ILE 121 SER 122 ALA 123 PRO 124 GLY 125 GLY 126 ALA 127 ASP 128 VAL 129 ASP 130 ALA 131 THR 132 VAL 133 VAL 134 TYR 135 GLY 136 VAL 137 ASN 138 HIS 139 GLY 140 THR 141 LEU 142 LYS 143 SER 144 THR 145 ASP 146 THR 147 VAL 148 ILE 149 SER 150 ASN 151 ALA 152 SER 153 CSD 154 THR 155 THR 156 ASN 157 CYS 158 LEU 159 ALA 160 PRO 161 LEU 162 VAL 163 LYS 164 PRO 165 LEU 166 ASN 167 ASP 168 LYS 169 LEU 170 GLY 171 LEU 172 GLN 173 ASP 174 GLY 175 LEU 176 MET 177 THR 178 THR 179 VAL 180 HIS 181 ALA 182 TYR 183 THR 184 ASN 185 ASN 186 GLN 187 VAL 188 LEU 189 THR 190 ASP 191 VAL 192 TYR 193 HIS 194 GLU 195 ASP 196 LEU 197 ARG 198 ARG 199 ALA 200 ARG 201 SER 202 ALA 203 THR 204 MET 205 SER 206 MET 207 ILE 208 PRO 209 THR 210 LYS 211 THR 212 GLY 213 ALA 214 ALA 215 ALA 216 ALA 217 VAL 218 GLY 219 ASP 220 VAL 221 LEU 222 PRO 223 GLU 224 LEU 225 ASP 226 GLY 227 LYS 228 LEU 229 ASN 230 GLY 231 TYR 232 ALA 233 ILE 234 ARG 235 VAL 236 PRO 237 THR 238 ILE 239 ASN 240 VAL 241 SER 242 ILE 243 VAL 244 ASP 245 LEU 246 SER 247 PHE 248 VAL 249 ALA 250 LYS 251 ARG 252 ASN 253 THR 254 THR 255 VAL 256 GLU 257 GLU 258 VAL 259 ASN 260 GLY 261 ILE 262 LEU 263 LYS 264 ALA 265 ALA 266 SER 267 GLU 268 GLY 269 GLU 270 LEU 271 LYS 272 GLY 273 ILE 274 LEU 275 ASP 276 TYR 277 ASN 278 THR 279 GLU 280 PRO 281 LEU 282 VAL 283 SER 284 VAL 285 ASP 286 TYR 287 ASN 288 HIS 289 ASP 290 PRO 291 ALA 292 SER 293 SER 294 THR 295 VAL 296 ASP 297 ALA 298 SER 299 LEU 300 THR 301 LYS 302 VAL 303 SER 304 GLY 305 ARG 306 LEU 307 VAL 308 LYS 309 VAL 310 SER 311 SER 312 TRP 313 TYR 314 ASP 315 ASN 316 GLU 317 TRP 318 GLY 319 PHE 320 SER 321 ASN 322 ARG 323 MET 324 LEU 325 ASP 326 THR 327 THR 328 VAL 329 ALA 330 LEU 331 MET 332 SER 333 ALA 334 ALA 335

Ligands

Unit 3	SO4 341 SO4 342 K 343
Unit 4	SO4 341 K 343 PG4 344