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Sequence, Chains, Asymmetric and Biological Units

Title FV IGE SPE-7 IN COMPLEX WITH ALIZARIN RED
Keywords IMMUNE SYSTEM, ANTIBODY-COMPLEX, ANTIBODY, ALLERGY, IGE, CONFORMATIONAL DIVERSITY, MULTISPECIFICITY
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1OAR     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IMMUNOGLOBULIN E  H 122 964 0
2  Protein   IMMUNOGLOBULIN E  I 88 728 0
3  Protein   IMMUNOGLOBULIN E  J 122 964 0
4  Protein   IMMUNOGLOBULIN E  K 82 683 0
5  Protein   IMMUNOGLOBULING E  L 108 795 0
6  Protein   IMMUNOGLOBULING E  M 103 767 0
7  Protein   IMMUNOGLOBULING E  N 108 795 0
8  Protein   IMMUNOGLOBULING E  O 106 786 0
9  Ligand   IMMUNOGLOBULIN E  H 11 0 60
10  Ligand   IMMUNOGLOBULIN E  I 2 0 23
11  Ligand   IMMUNOGLOBULIN E  J 12 0 61
12  Ligand   IMMUNOGLOBULIN E  K 1 0 22
13  Ligand   IMMUNOGLOBULING E  L 9 0 24
14  Ligand   IMMUNOGLOBULING E  M 2 0 2
15  Ligand   IMMUNOGLOBULING E  N 8 0 23
16  Ligand   IMMUNOGLOBULING E  O 1 0 1
17 Water     352 0 352
total       1237 6482 568

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLY42 ARG43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO53 ASN54 GLY55 GLY56 GLY57 THR58 LYS59 TYR60 ASN61 GLU62 LYS63 PHE64 LYS65 SER66 LYS67 ALA68 THR69 LEU70 THR71 VAL72 ASP73 LYS74 PRO75 SER76 SER77 THR78 ALA79 TYR80 MET81 GLN82 LEU83 SER84 SER85 LEU86 THR87 SER88 GLU89 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 MET99 TRP100 TYR101 TYR102 GLY103 THR104 TYR105 TYR106 PHE107 ASP108 TYR109 TRP110 GLY111 GLN112 GLY113 THR114 THR115 LEU116 THR117 VAL118 SER119 SER120 ALA121 ALA122
Unit 2 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 GLY57 THR58 LYS59 TYR60 ASN61 GLU62 LYS63 PHE64 LYS65 SER66 LYS67 ALA68 THR69 LEU70 THR71 VAL72 SER77 THR78 ALA79 TYR80 MET81 GLN82 LEU83 SER84 SER85 LEU86 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 MET99 TRP100 TYR101 TYR102 GLY103 THR104 TYR105 TYR106 PHE107 ASP108 TYR109 TRP110 GLY111 GLN112 GLY113 THR114 THR115 LEU116
Unit 3 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 ALA9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 PRO41 GLY42 ARG43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 PRO53 ASN54 GLY55 GLY56 GLY57 THR58 LYS59 TYR60 ASN61 GLU62 LYS63 PHE64 LYS65 SER66 LYS67 ALA68 THR69 LEU70 THR71 VAL72 ASP73 LYS74 PRO75 SER76 SER77 THR78 ALA79 TYR80 MET81 GLN82 LEU83 SER84 SER85 LEU86 THR87 SER88 GLU89 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 MET99 TRP100 TYR101 TYR102 GLY103 THR104 TYR105 TYR106 PHE107 ASP108 TYR109 TRP110 GLY111 GLN112 GLY113 THR114 THR115 LEU116 THR117 VAL118 SER119 SER120 ALA121 ALA122
Unit 4 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 LEU20 SER21 CYS22 LYS23 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 VAL37 LYS38 GLN39 ARG40 LEU45 GLU46 TRP47 ILE48 GLY49 ARG50 ILE51 ASP52 GLY57 THR58 LYS59 TYR60 ASN61 GLU62 LYS63 PHE64 LYS65 SER66 LYS67 ALA68 THR69 LEU70 THR71 VAL72 SER77 THR78 ALA79 TYR80 MET81 GLN82 LEU83 SER84 SER85 LEU86 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 MET99 TRP100 TYR101 TYR102 GLY103 THR104 TYR105 TYR106 PHE107 ASP108 TYR109 TRP110 GLY111 GLN112 GLY113 THR114 THR115 LEU116
Unit 5 ALA2 VAL3 VAL4 THR5 GLN6 GLU7 SER8 ALA9 LEU10 THR11 THR12 SER13 PRO14 GLY15 GLU16 THR17 VAL18 THR19 LEU20 THR21 CYS22 ARG23 SER24 SER25 THR26 GLY27 ALA28 VAL29 THR30 THR31 SER32 ASN33 TYR34 ALA35 ASN36 TRP37 VAL38 GLN39 GLU40 LYS41 PRO42 ASP43 HIS44 LEU45 PHE46 THR47 GLY48 LEU49 ILE50 GLY51 GLY52 THR53 ASN54 ASN55 ARG56 ALA57 PRO58 GLY59 VAL60 PRO61 ALA62 ARG63 PHE64 SER65 GLY66 SER67 LEU68 ILE69 GLY70 ASN71 LYS72 ALA73 ALA74 LEU75 THR76 ILE77 THR78 GLY79 ALA80 GLN81 THR82 GLU83 ASP84 GLU85 ALA86 ILE87 TYR88 PHE89 CYS90 ALA91 LEU92 TRP93 TYR94 SER95 ASN96 HIS97 LEU98 VAL99 PHE100 GLY101 GLY102 GLY103 THR104 LYS105 LEU106 THR107 VAL108 LEU109
Unit 6 VAL3 VAL4 THR5 GLN6 GLU7 SER8 ALA9 LEU10 THR11 THR12 SER13 PRO14 GLY15 GLU16 THR17 VAL18 THR19 LEU20 THR21 CYS22 ARG23 ALA28 VAL29 THR30 THR31 SER32 ASN33 TYR34 ALA35 ASN36 TRP37 VAL38 GLN39 GLU40 LYS41 PRO42 ASP43 HIS44 LEU45 PHE46 THR47 GLY48 LEU49 ILE50 GLY51 GLY52 THR53 ASN54 ASN55 ARG56 ALA57 PRO58 GLY59 VAL60 PRO61 ALA62 ARG63 PHE64 SER65 GLY66 SER67 LEU68 ILE69 GLY70 ASN71 LYS72 ALA73 ALA74 LEU75 THR76 ILE77 THR78 GLY79 ALA80 GLN81 THR82 GLU83 ASP84 GLU85 ALA86 ILE87 TYR88 PHE89 CYS90 ALA91 LEU92 TRP93 TYR94 SER95 ASN96 HIS97 LEU98 VAL99 PHE100 GLY101 GLY102 GLY103 THR104 LYS105 LEU106 THR107 VAL108 LEU109
Unit 7 ALA2 VAL3 VAL4 THR5 GLN6 GLU7 SER8 ALA9 LEU10 THR11 THR12 SER13 PRO14 GLY15 GLU16 THR17 VAL18 THR19 LEU20 THR21 CYS22 ARG23 SER24 SER25 THR26 GLY27 ALA28 VAL29 THR30 THR31 SER32 ASN33 TYR34 ALA35 ASN36 TRP37 VAL38 GLN39 GLU40 LYS41 PRO42 ASP43 HIS44 LEU45 PHE46 THR47 GLY48 LEU49 ILE50 GLY51 GLY52 THR53 ASN54 ASN55 ARG56 ALA57 PRO58 GLY59 VAL60 PRO61 ALA62 ARG63 PHE64 SER65 GLY66 SER67 LEU68 ILE69 GLY70 ASN71 LYS72 ALA73 ALA74 LEU75 THR76 ILE77 THR78 GLY79 ALA80 GLN81 THR82 GLU83 ASP84 GLU85 ALA86 ILE87 TYR88 PHE89 CYS90 ALA91 LEU92 TRP93 TYR94 SER95 ASN96 HIS97 LEU98 VAL99 PHE100 GLY101 GLY102 GLY103 THR104 LYS105 LEU106 THR107 VAL108 LEU109
Unit 8 VAL3 VAL4 THR5 GLN6 GLU7 SER8 ALA9 LEU10 THR11 THR12 SER13 PRO14 GLY15 GLU16 THR17 VAL18 THR19 LEU20 THR21 CYS22 ARG23 SER24 SER25 THR26 ALA28 VAL29 THR30 THR31 SER32 ASN33 TYR34 ALA35 ASN36 TRP37 VAL38 GLN39 GLU40 LYS41 PRO42 ASP43 HIS44 LEU45 PHE46 THR47 GLY48 LEU49 ILE50 GLY51 GLY52 THR53 ASN54 ASN55 ARG56 ALA57 PRO58 GLY59 VAL60 PRO61 ALA62 ARG63 PHE64 SER65 GLY66 SER67 LEU68 ILE69 GLY70 ASN71 LYS72 ALA73 ALA74 LEU75 THR76 ILE77 THR78 GLY79 ALA80 GLN81 THR82 GLU83 ASP84 GLU85 ALA86 ILE87 TYR88 PHE89 CYS90 ALA91 LEU92 TRP93 TYR94 SER95 ASN96 HIS97 LEU98 VAL99 PHE100 GLY101 GLY102 GLY103 THR104 LYS105 LEU106 THR107 VAL108 LEU109

Ligands
Unit 9 CAC201 DMS300 DMS301 DMS302 DMS303 DMS304 DMS305 DMS306 EDO401 AZN500 NA903
Unit 10 AZN500 NA903
Unit 11 CAC201 DMS300 DMS301 DMS302 DMS303 DMS304 DMS305 DMS306 EDO401 AZN500 NA903 CL912
Unit 12 AZN500
Unit 13 DMS300 DMS301 DMS302 DMS303 DMS304 NA901 CL911 CL912 CL913
Unit 14 NA903 CL913
Unit 15 DMS300 DMS301 DMS302 DMS303 DMS304 NA901 CL911 CL913
Unit 16 CL913

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany