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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE RETINOBLASTOMA TUMOUR SUPPRESSOR PROTEIN BOUND TO E2F PEPTIDE
Keywords APOPTOSIS, TUMOUR SUPPRESSOR, CELL CYCLE REGULATION, DNA-BIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1O9K     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  A 194 1569 0
2  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  B 144 1213 0
3  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  C 194 1569 0
4  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  D 144 1213 0
5  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  E 194 1569 0
6  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  F 144 1213 0
7  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  G 194 1569 0
8  Protein   RETINOBLASTOMA-ASSOCIATED PROTEIN  H 144 1213 0
9  Protein   TRANSCRIPTION FACTOR E2F1  P 18 149 0
10  Protein   TRANSCRIPTION FACTOR E2F1  Q 18 149 0
11  Protein   TRANSCRIPTION FACTOR E2F1  R 18 149 0
12  Protein   TRANSCRIPTION FACTOR E2F1  S 18 149 0
13 Water     249 0 250
total       1673 11724 250

Proteins
Unit 1 MET379 ASN380 THR381 ILE382 GLN383 GLN384 LEU385 MET386 MET387 ILE388 LEU389 ASN390 SER391 ALA392 SER393 ASP394 GLN395 PRO396 SER397 GLU398 ASN399 LEU400 ILE401 SER402 TYR403 PHE404 ASN405 ASN406 CYS407 THR408 VAL409 ASN410 PRO411 LYS412 GLU413 SER414 ILE415 LEU416 LYS417 ARG418 VAL419 LYS420 ASP421 ILE422 GLY423 TYR424 ILE425 PHE426 LYS427 GLU428 LYS429 PHE430 ALA431 LYS432 ALA433 VAL434 GLY435 GLN436 GLY437 CYS438 VAL439 GLU440 ILE441 GLY442 SER443 GLN444 ARG445 TYR446 LYS447 LEU448 GLY449 VAL450 ARG451 LEU452 TYR453 TYR454 ARG455 VAL456 MET457 GLU458 SER459 MET460 LEU461 LYS462 SER463 GLU464 GLU465 GLU466 ARG467 LEU468 SER469 ILE470 GLN471 ASN472 PHE473 SER474 LYS475 LEU476 LEU477 ASN478 ASP479 ASN480 ILE481 PHE482 HIS483 MET484 SER485 LEU486 LEU487 ALA488 CYS489 ALA490 LEU491 GLU492 VAL493 VAL494 MET495 ALA496 THR497 TYR498 SER499 ARG500 SER501 SER508 GLY509 THR510 ASP511 LEU512 SER513 PHE514 PRO515 TRP516 ILE517 LEU518 ASN519 VAL520 LEU521 ASN522 LEU523 LYS524 ALA525 PHE526 ASP527 PHE528 TYR529 LYS530 VAL531 ILE532 GLU533 SER534 PHE535 ILE536 LYS537 ALA538 GLU539 GLY540 ASN541 LEU542 THR543 ARG544 GLU545 MET546 ILE547 LYS548 HIS549 LEU550 GLU551 ARG552 CYS553 GLU554 HIS555 ARG556 ILE557 MET558 GLU559 SER560 LEU561 ALA562 TRP563 LEU564 SER565 ASP566 SER567 PRO568 LEU569 PHE570 ASP571 LEU572 ILE573 LYS574 GLN575 SER576 LYS577 ASP578
Unit 2 SER644 THR645 SER646 LEU647 SER648 LEU649 PHE650 TYR651 LYS652 LYS653 VAL654 TYR655 ARG656 LEU657 ALA658 TYR659 LEU660 ARG661 LEU662 ASN663 THR664 LEU665 CYS666 GLU667 ARG668 LEU669 LEU670 SER671 GLU672 HIS673 PRO674 GLU675 LEU676 GLU677 HIS678 ILE679 ILE680 TRP681 THR682 LEU683 PHE684 GLN685 HIS686 THR687 LEU688 GLN689 ASN690 GLU691 TYR692 GLU693 LEU694 MET695 ARG696 ASP697 ARG698 HIS699 LEU700 ASP701 GLN702 ILE703 MET704 MET705 CYS706 SER707 MET708 TYR709 GLY710 ILE711 CYS712 LYS713 VAL714 LYS715 ASN716 ILE717 ASP718 LEU719 LYS720 PHE721 LYS722 ILE723 ILE724 VAL725 THR726 ALA727 TYR728 LYS729 ASP730 LEU731 PRO732 HIS733 ALA734 VAL735 GLN736 GLU737 THR738 PHE739 LYS740 ARG741 VAL742 LEU743 ILE744 LYS745 GLU746 GLU747 GLU748 TYR749 ASP750 SER751 ILE752 ILE753 VAL754 PHE755 TYR756 ASN757 SER758 VAL759 PHE760 MET761 GLN762 ARG763 LEU764 LYS765 THR766 ASN767 ILE768 LEU769 GLN770 TYR771 ALA772 SER773 THR774 ARG775 PRO776 PRO777 THR778 LEU779 SER780 PRO781 ILE782 PRO783 HIS784 ILE785 PRO786 ARG787
Unit 3 MET379 ASN380 THR381 ILE382 GLN383 GLN384 LEU385 MET386 MET387 ILE388 LEU389 ASN390 SER391 ALA392 SER393 ASP394 GLN395 PRO396 SER397 GLU398 ASN399 LEU400 ILE401 SER402 TYR403 PHE404 ASN405 ASN406 CYS407 THR408 VAL409 ASN410 PRO411 LYS412 GLU413 SER414 ILE415 LEU416 LYS417 ARG418 VAL419 LYS420 ASP421 ILE422 GLY423 TYR424 ILE425 PHE426 LYS427 GLU428 LYS429 PHE430 ALA431 LYS432 ALA433 VAL434 GLY435 GLN436 GLY437 CYS438 VAL439 GLU440 ILE441 GLY442 SER443 GLN444 ARG445 TYR446 LYS447 LEU448 GLY449 VAL450 ARG451 LEU452 TYR453 TYR454 ARG455 VAL456 MET457 GLU458 SER459 MET460 LEU461 LYS462 SER463 GLU464 GLU465 GLU466 ARG467 LEU468 SER469 ILE470 GLN471 ASN472 PHE473 SER474 LYS475 LEU476 LEU477 ASN478 ASP479 ASN480 ILE481 PHE482 HIS483 MET484 SER485 LEU486 LEU487 ALA488 CYS489 ALA490 LEU491 GLU492 VAL493 VAL494 MET495 ALA496 THR497 TYR498 SER499 ARG500 SER501 SER508 GLY509 THR510 ASP511 LEU512 SER513 PHE514 PRO515 TRP516 ILE517 LEU518 ASN519 VAL520 LEU521 ASN522 LEU523 LYS524 ALA525 PHE526 ASP527 PHE528 TYR529 LYS530 VAL531 ILE532 GLU533 SER534 PHE535 ILE536 LYS537 ALA538 GLU539 GLY540 ASN541 LEU542 THR543 ARG544 GLU545 MET546 ILE547 LYS548 HIS549 LEU550 GLU551 ARG552 CYS553 GLU554 HIS555 ARG556 ILE557 MET558 GLU559 SER560 LEU561 ALA562 TRP563 LEU564 SER565 ASP566 SER567 PRO568 LEU569 PHE570 ASP571 LEU572 ILE573 LYS574 GLN575 SER576 LYS577 ASP578
Unit 4 SER644 THR645 SER646 LEU647 SER648 LEU649 PHE650 TYR651 LYS652 LYS653 VAL654 TYR655 ARG656 LEU657 ALA658 TYR659 LEU660 ARG661 LEU662 ASN663 THR664 LEU665 CYS666 GLU667 ARG668 LEU669 LEU670 SER671 GLU672 HIS673 PRO674 GLU675 LEU676 GLU677 HIS678 ILE679 ILE680 TRP681 THR682 LEU683 PHE684 GLN685 HIS686 THR687 LEU688 GLN689 ASN690 GLU691 TYR692 GLU693 LEU694 MET695 ARG696 ASP697 ARG698 HIS699 LEU700 ASP701 GLN702 ILE703 MET704 MET705 CYS706 SER707 MET708 TYR709 GLY710 ILE711 CYS712 LYS713 VAL714 LYS715 ASN716 ILE717 ASP718 LEU719 LYS720 PHE721 LYS722 ILE723 ILE724 VAL725 THR726 ALA727 TYR728 LYS729 ASP730 LEU731 PRO732 HIS733 ALA734 VAL735 GLN736 GLU737 THR738 PHE739 LYS740 ARG741 VAL742 LEU743 ILE744 LYS745 GLU746 GLU747 GLU748 TYR749 ASP750 SER751 ILE752 ILE753 VAL754 PHE755 TYR756 ASN757 SER758 VAL759 PHE760 MET761 GLN762 ARG763 LEU764 LYS765 THR766 ASN767 ILE768 LEU769 GLN770 TYR771 ALA772 SER773 THR774 ARG775 PRO776 PRO777 THR778 LEU779 SER780 PRO781 ILE782 PRO783 HIS784 ILE785 PRO786 ARG787
Unit 5 MET379 ASN380 THR381 ILE382 GLN383 GLN384 LEU385 MET386 MET387 ILE388 LEU389 ASN390 SER391 ALA392 SER393 ASP394 GLN395 PRO396 SER397 GLU398 ASN399 LEU400 ILE401 SER402 TYR403 PHE404 ASN405 ASN406 CYS407 THR408 VAL409 ASN410 PRO411 LYS412 GLU413 SER414 ILE415 LEU416 LYS417 ARG418 VAL419 LYS420 ASP421 ILE422 GLY423 TYR424 ILE425 PHE426 LYS427 GLU428 LYS429 PHE430 ALA431 LYS432 ALA433 VAL434 GLY435 GLN436 GLY437 CYS438 VAL439 GLU440 ILE441 GLY442 SER443 GLN444 ARG445 TYR446 LYS447 LEU448 GLY449 VAL450 ARG451 LEU452 TYR453 TYR454 ARG455 VAL456 MET457 GLU458 SER459 MET460 LEU461 LYS462 SER463 GLU464 GLU465 GLU466 ARG467 LEU468 SER469 ILE470 GLN471 ASN472 PHE473 SER474 LYS475 LEU476 LEU477 ASN478 ASP479 ASN480 ILE481 PHE482 HIS483 MET484 SER485 LEU486 LEU487 ALA488 CYS489 ALA490 LEU491 GLU492 VAL493 VAL494 MET495 ALA496 THR497 TYR498 SER499 ARG500 SER501 SER508 GLY509 THR510 ASP511 LEU512 SER513 PHE514 PRO515 TRP516 ILE517 LEU518 ASN519 VAL520 LEU521 ASN522 LEU523 LYS524 ALA525 PHE526 ASP527 PHE528 TYR529 LYS530 VAL531 ILE532 GLU533 SER534 PHE535 ILE536 LYS537 ALA538 GLU539 GLY540 ASN541 LEU542 THR543 ARG544 GLU545 MET546 ILE547 LYS548 HIS549 LEU550 GLU551 ARG552 CYS553 GLU554 HIS555 ARG556 ILE557 MET558 GLU559 SER560 LEU561 ALA562 TRP563 LEU564 SER565 ASP566 SER567 PRO568 LEU569 PHE570 ASP571 LEU572 ILE573 LYS574 GLN575 SER576 LYS577 ASP578
Unit 6 SER644 THR645 SER646 LEU647 SER648 LEU649 PHE650 TYR651 LYS652 LYS653 VAL654 TYR655 ARG656 LEU657 ALA658 TYR659 LEU660 ARG661 LEU662 ASN663 THR664 LEU665 CYS666 GLU667 ARG668 LEU669 LEU670 SER671 GLU672 HIS673 PRO674 GLU675 LEU676 GLU677 HIS678 ILE679 ILE680 TRP681 THR682 LEU683 PHE684 GLN685 HIS686 THR687 LEU688 GLN689 ASN690 GLU691 TYR692 GLU693 LEU694 MET695 ARG696 ASP697 ARG698 HIS699 LEU700 ASP701 GLN702 ILE703 MET704 MET705 CYS706 SER707 MET708 TYR709 GLY710 ILE711 CYS712 LYS713 VAL714 LYS715 ASN716 ILE717 ASP718 LEU719 LYS720 PHE721 LYS722 ILE723 ILE724 VAL725 THR726 ALA727 TYR728 LYS729 ASP730 LEU731 PRO732 HIS733 ALA734 VAL735 GLN736 GLU737 THR738 PHE739 LYS740 ARG741 VAL742 LEU743 ILE744 LYS745 GLU746 GLU747 GLU748 TYR749 ASP750 SER751 ILE752 ILE753 VAL754 PHE755 TYR756 ASN757 SER758 VAL759 PHE760 MET761 GLN762 ARG763 LEU764 LYS765 THR766 ASN767 ILE768 LEU769 GLN770 TYR771 ALA772 SER773 THR774 ARG775 PRO776 PRO777 THR778 LEU779 SER780 PRO781 ILE782 PRO783 HIS784 ILE785 PRO786 ARG787
Unit 7 MET379 ASN380 THR381 ILE382 GLN383 GLN384 LEU385 MET386 MET387 ILE388 LEU389 ASN390 SER391 ALA392 SER393 ASP394 GLN395 PRO396 SER397 GLU398 ASN399 LEU400 ILE401 SER402 TYR403 PHE404 ASN405 ASN406 CYS407 THR408 VAL409 ASN410 PRO411 LYS412 GLU413 SER414 ILE415 LEU416 LYS417 ARG418 VAL419 LYS420 ASP421 ILE422 GLY423 TYR424 ILE425 PHE426 LYS427 GLU428 LYS429 PHE430 ALA431 LYS432 ALA433 VAL434 GLY435 GLN436 GLY437 CYS438 VAL439 GLU440 ILE441 GLY442 SER443 GLN444 ARG445 TYR446 LYS447 LEU448 GLY449 VAL450 ARG451 LEU452 TYR453 TYR454 ARG455 VAL456 MET457 GLU458 SER459 MET460 LEU461 LYS462 SER463 GLU464 GLU465 GLU466 ARG467 LEU468 SER469 ILE470 GLN471 ASN472 PHE473 SER474 LYS475 LEU476 LEU477 ASN478 ASP479 ASN480 ILE481 PHE482 HIS483 MET484 SER485 LEU486 LEU487 ALA488 CYS489 ALA490 LEU491 GLU492 VAL493 VAL494 MET495 ALA496 THR497 TYR498 SER499 ARG500 SER501 SER508 GLY509 THR510 ASP511 LEU512 SER513 PHE514 PRO515 TRP516 ILE517 LEU518 ASN519 VAL520 LEU521 ASN522 LEU523 LYS524 ALA525 PHE526 ASP527 PHE528 TYR529 LYS530 VAL531 ILE532 GLU533 SER534 PHE535 ILE536 LYS537 ALA538 GLU539 GLY540 ASN541 LEU542 THR543 ARG544 GLU545 MET546 ILE547 LYS548 HIS549 LEU550 GLU551 ARG552 CYS553 GLU554 HIS555 ARG556 ILE557 MET558 GLU559 SER560 LEU561 ALA562 TRP563 LEU564 SER565 ASP566 SER567 PRO568 LEU569 PHE570 ASP571 LEU572 ILE573 LYS574 GLN575 SER576 LYS577 ASP578
Unit 8 SER644 THR645 SER646 LEU647 SER648 LEU649 PHE650 TYR651 LYS652 LYS653 VAL654 TYR655 ARG656 LEU657 ALA658 TYR659 LEU660 ARG661 LEU662 ASN663 THR664 LEU665 CYS666 GLU667 ARG668 LEU669 LEU670 SER671 GLU672 HIS673 PRO674 GLU675 LEU676 GLU677 HIS678 ILE679 ILE680 TRP681 THR682 LEU683 PHE684 GLN685 HIS686 THR687 LEU688 GLN689 ASN690 GLU691 TYR692 GLU693 LEU694 MET695 ARG696 ASP697 ARG698 HIS699 LEU700 ASP701 GLN702 ILE703 MET704 MET705 CYS706 SER707 MET708 TYR709 GLY710 ILE711 CYS712 LYS713 VAL714 LYS715 ASN716 ILE717 ASP718 LEU719 LYS720 PHE721 LYS722 ILE723 ILE724 VAL725 THR726 ALA727 TYR728 LYS729 ASP730 LEU731 PRO732 HIS733 ALA734 VAL735 GLN736 GLU737 THR738 PHE739 LYS740 ARG741 VAL742 LEU743 ILE744 LYS745 GLU746 GLU747 GLU748 TYR749 ASP750 SER751 ILE752 ILE753 VAL754 PHE755 TYR756 ASN757 SER758 VAL759 PHE760 MET761 GLN762 ARG763 LEU764 LYS765 THR766 ASN767 ILE768 LEU769 GLN770 TYR771 ALA772 SER773 THR774 ARG775 PRO776 PRO777 THR778 LEU779 SER780 PRO781 ILE782 PRO783 HIS784 ILE785 PRO786 ARG787
Unit 9 LEU409 ASP410 TYR411 HIS412 PHE413 GLY414 LEU415 GLU416 GLU417 GLY418 GLU419 GLY420 ILE421 ARG422 ASP423 LEU424 PHE425 ASP426
Unit 10 LEU409 ASP410 TYR411 HIS412 PHE413 GLY414 LEU415 GLU416 GLU417 GLY418 GLU419 GLY420 ILE421 ARG422 ASP423 LEU424 PHE425 ASP426
Unit 11 LEU409 ASP410 TYR411 HIS412 PHE413 GLY414 LEU415 GLU416 GLU417 GLY418 GLU419 GLY420 ILE421 ARG422 ASP423 LEU424 PHE425 ASP426
Unit 12 LEU409 ASP410 TYR411 HIS412 PHE413 GLY414 LEU415 GLU416 GLU417 GLY418 GLU419 GLY420 ILE421 ARG422 ASP423 LEU424 PHE425 ASP426

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany