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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE SPECIFICITY DOMAIN OF RIBONUCLEASE P RNA
Keywords RIBONUCLEASE P RNA, P RNA, S-DOMAIN
Experiment theoretical model
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NXL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    M 154 3306 0
2  Ligand      10 0 10
total       164 3306 10

Nucleic acids
Unit 1 G86 C87 G88 A89 G90 C91 C92 U93 A94 G95 C96 G97 A98 A99 G100 U101 C102 A103 U104 A105 A106 G107 C108 U109 A110 G111 G112 G113 C114 A115 G116 U117 C118 U119 U120 U121 A122 G123 A124 G125 G126 C127 U128 G129 A130 C131 G132 G133 C134 A135 G136 G137 A138 A139 A140 A141 A142 A143 G144 C145 C146 U147 A148 C149 G150 U151 C152 U153 U154 C155 G156 G157 A158 U159 A160 U161 G162 G163 C164 U165 G166 A167 G168 U169 A170 U171 C172 C173 U174 U175 G176 A177 A178 A179 G180 U181 G182 C183 C184 A185 C186 A187 G188 U189 G190 A191 C192 G193 A194 A195 G196 U197 C198 U199 C200 A201 C202 U203 A204 G205 A206 A207 A208 U209 G210 G211 U212 G213 A214 G215 A216 G217 U218 G219 G220 A221 A222 C223 G224 C225 G226 G227 U228 A229 A230 A231 C232 C233 C234 C235 U236 C237 G238 C239

Ligands
Unit 2 MG1 MG2 MG4 MG5 MG6 MG12 MG13 MG17 MG18 MG19

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany