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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX WITH IMMH AND SULFATE
Keywords TRANSITION STATE COMPLEX, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1NW4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  A 243 1861 0
2  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  B 243 1861 0
3  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  C 243 1861 0
4  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  D 243 1861 0
5  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  E 243 1861 0
6  Protein   URIDINE PHOSPHORYLASE, PUTATIVE  F 243 1861 0
7  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  A 8 0 51
8  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  B 8 0 50
9  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  C 4 0 33
10  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  D 6 0 42
11  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  E 6 0 42
12  Ligand   URIDINE PHOSPHORYLASE, PUTATIVE  F 8 0 51
13 Water     248 0 248
total       1746 11166 517

Proteins
Unit 1 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245
Unit 2 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245
Unit 3 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245
Unit 4 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245
Unit 5 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245
Unit 6 ASN3 LEU4 LEU5 ARG6 HIS7 LEU8 LYS9 ILE10 SER11 LYS12 GLU13 GLN14 ILE15 THR16 PRO17 VAL18 VAL19 LEU20 VAL21 VAL22 GLY23 ASP24 PRO25 GLY26 ARG27 VAL28 ASP29 LYS30 ILE31 LYS32 VAL33 VAL34 CYS35 ASP36 SER37 TYR38 VAL39 ASP40 LEU41 ALA42 TYR43 ASN44 ARG45 GLU46 TYR47 LYS48 SER49 VAL50 GLU51 CYS52 HIS53 TYR54 LYS55 GLY56 GLN57 LYS58 PHE59 LEU60 CYS61 VAL62 SER63 HIS64 GLY65 VAL66 GLY67 SER68 ALA69 GLY70 CYS71 ALA72 VAL73 CYS74 PHE75 GLU76 GLU77 LEU78 CYS79 GLN80 ASN81 GLY82 ALA83 LYS84 VAL85 ILE86 ILE87 ARG88 ALA89 GLY90 SER91 CYS92 GLY93 SER94 LEU95 GLN96 PRO97 ASP98 LEU99 ILE100 LYS101 ARG102 GLY103 ASP104 ILE105 CYS106 ILE107 CYS108 ASN109 ALA110 ALA111 VAL112 ARG113 GLU114 ASP115 ARG116 VAL117 SER118 HIS119 LEU120 LEU121 ILE122 HIS123 GLY124 ASP125 PHE126 PRO127 ALA128 VAL129 GLY130 ASP131 PHE132 ASP133 VAL134 TYR135 ASP136 THR137 LEU138 ASN139 LYS140 CYS141 ALA142 GLN143 GLU144 LEU145 ASN146 VAL147 PRO148 VAL149 PHE150 ASN151 GLY152 ILE153 SER154 VAL155 SER156 SER157 ASP158 MET159 TYR160 TYR161 PRO162 ASN163 LYS164 ILE165 ILE166 PRO167 SER168 ARG169 LEU170 GLU171 ASP172 TYR173 SER174 LYS175 ALA176 ASN177 ALA178 ALA179 VAL180 VAL181 GLU182 MET183 GLU184 LEU185 ALA186 THR187 LEU188 MET189 VAL190 ILE191 GLY192 THR193 LEU194 ARG195 LYS196 VAL197 LYS198 THR199 GLY200 GLY201 ILE202 LEU203 ILE204 VAL205 ASP206 GLY207 CYS208 PRO209 PHE210 LYS211 TRP212 ASP213 GLU214 GLY215 ASP216 PHE217 ASP218 ASN219 ASN220 LEU221 VAL222 PRO223 HIS224 GLN225 LEU226 GLU227 ASN228 MET229 ILE230 LYS231 ILE232 ALA233 LEU234 GLY235 ALA236 CYS237 ALA238 LYS239 LEU240 ALA241 THR242 LYS243 TYR244 ALA245

Ligands
Unit 7 IMH301 SO4401 SO4411 SO4412 SO4413 IPA502 IPA509 IPA510
Unit 8 IMH302 SO4402 SO4407 SO4410 IPA501 IPA507 IPA508 IPA515
Unit 9 IMH303 SO4403 SO4418 IPA504
Unit 10 IMH304 SO4404 SO4408 SO4417 IPA503 IPA514
Unit 11 IMH305 SO4405 SO4416 SO4419 IPA506 IPA513
Unit 12 IMH306 SO4406 SO4409 SO4414 SO4415 IPA505 IPA511 IPA512

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany